| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026117.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.6e-179 | 87.9 | Show/hide |
Query: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
TRRKDKIDYLKM ELLQFRRNNVWTLVSK EGVNVIGTKWIFKNK DETGCVTKNKARLVAQGYTQVEGVD
Subjt: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
Query: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
FDETFAPVARL+AIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGY R EIDK
Subjt: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
Query: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
T FIHRKSDQLLVAQIYVDDIIFGGFP+DLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYA+NMVKKF LEQARNKRTLAATHVKLTK
Subjt: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
Query: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
DT+GAEVD KLYRSIVGNLLYLTTSRPDIAY VGICA YQADPRITHLE VKRILKYVHGTSDF MMYSYDT
Subjt: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
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| KAA0033021.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.8e-170 | 83.33 | Show/hide |
Query: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
TRRK+KIDY+KMVADLCYIST EPSTVDSA +DEYWLNAMQ+ELL+FRRNNVWTLVSK EGVNVI G+D
Subjt: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
Query: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLN YLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRG+GYS+GEIDK
Subjt: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
Query: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
TLFIHRKSDQLLVAQIYVDDIIFG FP DL+NNFINIMQSE EMS VGELSCFLGLQIKQKNDDI ISQEKYARNMVKKFGLEQARNKRT AATHVKLTK
Subjt: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
Query: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
+T+GAEVD KLY+SIVGNLLYLT SRPDIAY VGI ARYQADPRITHLE VK+I+KYVHGTSDFGMM SYDT
Subjt: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
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| KAA0053137.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.4e-183 | 91.81 | Show/hide |
Query: ISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLL
++ E T++SALKDEYWLN MQEELLQFRRNNVWTL+SK EGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLL
Subjt: ISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLL
Query: GISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSDQLLVAQIYV
GISCIQKFKLYQ+DVKS FLN YLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQA RAWYDRLTVYLRGRGYSRGEIDK LFIHRKSDQLLVAQIYV
Subjt: GISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSDQLLVAQIYV
Query: DDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKLYRSIVGN
DDIIFGGFP DL+NNFINIMQSEFEMS VGELSCFLGLQIKQKND IFISQEKYARNMVKKFGL+QARNKRT AATHVKLTKDT+GAEVD KLYRSIVG+
Subjt: DDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKLYRSIVGN
Query: LLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
LLYLT SRPDIAY VGICARYQADPRIT LE VKRILKYVHGTSDFGMMYSYDT
Subjt: LLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
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| KAA0066164.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.0e-174 | 84.95 | Show/hide |
Query: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
TRRK+KIDY+KMVADLCYIST+EPSTVDSAL+DEYWLNAMQEELLQFR+NNVWTLVSK EGVNVIGTKW+FKNKTDE GCVTKNKA+LVAQGYTQVEG+D
Subjt: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
Query: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
FDETFA VARLEAIRLLLGISCIQKFKLYQMDVKSAFL+ YLNEEVYVAQPKGFVDSEHPKH+YKLNKALYGLKQA RAWYD+LTVYLRG+GYSRGEIDK
Subjt: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
Query: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
TLFI RKSDQLLVAQIYVDDIIF GFPHDLVNNFI EFEMS VGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRT AATHVKLTK
Subjt: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
Query: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
DT+ +EVD KLYRSI ADPRITHLE VKRILKYVHGTSDFGMMYSYDT
Subjt: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
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| TYK11575.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.6e-179 | 87.63 | Show/hide |
Query: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
TRRKDKIDYLKM ELLQFRRNNVWTLVSK EGVNVIGTKWIFKNK DETGCVTKNKARLVAQGYTQVEGVD
Subjt: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
Query: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
FDETFAPVARL+AIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLT YLRGRGY R EIDK
Subjt: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
Query: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
T FIHRKSDQLLVAQIYVDDIIFGGFP+DLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYA+NMVKKF LEQARNKRTLAATHVKLTK
Subjt: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
Query: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
DT+GAEVD KLYRSIVGNLLYLTTSRPDIAY VGICA YQADPRITHLE VKRILKYVHGTSDF MMYSYDT
Subjt: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SN07 Gag-pol polyprotein | 7.7e-180 | 87.9 | Show/hide |
Query: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
TRRKDKIDYLKM ELLQFRRNNVWTLVSK EGVNVIGTKWIFKNK DETGCVTKNKARLVAQGYTQVEGVD
Subjt: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
Query: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
FDETFAPVARL+AIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGY R EIDK
Subjt: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
Query: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
T FIHRKSDQLLVAQIYVDDIIFGGFP+DLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYA+NMVKKF LEQARNKRTLAATHVKLTK
Subjt: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
Query: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
DT+GAEVD KLYRSIVGNLLYLTTSRPDIAY VGICA YQADPRITHLE VKRILKYVHGTSDF MMYSYDT
Subjt: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
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| A0A5D3BPB3 Gag-pol polyprotein | 1.1e-183 | 91.81 | Show/hide |
Query: ISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLL
++ E T++SALKDEYWLN MQEELLQFRRNNVWTL+SK EGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLL
Subjt: ISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLL
Query: GISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSDQLLVAQIYV
GISCIQKFKLYQ+DVKS FLN YLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQA RAWYDRLTVYLRGRGYSRGEIDK LFIHRKSDQLLVAQIYV
Subjt: GISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSDQLLVAQIYV
Query: DDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKLYRSIVGN
DDIIFGGFP DL+NNFINIMQSEFEMS VGELSCFLGLQIKQKND IFISQEKYARNMVKKFGL+QARNKRT AATHVKLTKDT+GAEVD KLYRSIVG+
Subjt: DDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKLYRSIVGN
Query: LLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
LLYLT SRPDIAY VGICARYQADPRIT LE VKRILKYVHGTSDFGMMYSYDT
Subjt: LLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
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| A0A5D3BWU5 Gag-pol polyprotein | 8.5e-171 | 83.33 | Show/hide |
Query: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
TRRK+KIDY+KMVADLCYIST EPSTVDSA +DEYWLNAMQ+ELL+FRRNNVWTLVSK EGVNVI G+D
Subjt: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
Query: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLN YLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRG+GYS+GEIDK
Subjt: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
Query: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
TLFIHRKSDQLLVAQIYVDDIIFG FP DL+NNFINIMQSE EMS VGELSCFLGLQIKQKNDDI ISQEKYARNMVKKFGLEQARNKRT AATHVKLTK
Subjt: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
Query: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
+T+GAEVD KLY+SIVGNLLYLT SRPDIAY VGI ARYQADPRITHLE VK+I+KYVHGTSDFGMM SYDT
Subjt: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
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| A0A5D3CJ17 Gag-pol polyprotein | 2.2e-179 | 87.63 | Show/hide |
Query: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
TRRKDKIDYLKM ELLQFRRNNVWTLVSK EGVNVIGTKWIFKNK DETGCVTKNKARLVAQGYTQVEGVD
Subjt: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
Query: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
FDETFAPVARL+AIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLT YLRGRGY R EIDK
Subjt: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
Query: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
T FIHRKSDQLLVAQIYVDDIIFGGFP+DLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYA+NMVKKF LEQARNKRTLAATHVKLTK
Subjt: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
Query: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
DT+GAEVD KLYRSIVGNLLYLTTSRPDIAY VGICA YQADPRITHLE VKRILKYVHGTSDF MMYSYDT
Subjt: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
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| A0A5D3CXU0 Gag-pol polyprotein | 9.7e-175 | 84.95 | Show/hide |
Query: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
TRRK+KIDY+KMVADLCYIST+EPSTVDSAL+DEYWLNAMQEELLQFR+NNVWTLVSK EGVNVIGTKW+FKNKTDE GCVTKNKA+LVAQGYTQVEG+D
Subjt: TRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVD
Query: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
FDETFA VARLEAIRLLLGISCIQKFKLYQMDVKSAFL+ YLNEEVYVAQPKGFVDSEHPKH+YKLNKALYGLKQA RAWYD+LTVYLRG+GYSRGEIDK
Subjt: FDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDK
Query: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
TLFI RKSDQLLVAQIYVDDIIF GFPHDLVNNFI EFEMS VGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRT AATHVKLTK
Subjt: TLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTK
Query: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
DT+ +EVD KLYRSI ADPRITHLE VKRILKYVHGTSDFGMMYSYDT
Subjt: DTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYSYDT
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 7.4e-55 | 33.83 | Show/hide |
Query: WLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKS
W A+ EL + NN WT+ + E N++ ++W+F K +E G + KARLVA+G+TQ +D++ETFAPVAR+ + R +L + K++QMDVK+
Subjt: WLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKS
Query: AFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKS--DQLLVAQIYVDDIIFGGFPHDLVNN
AFLN L EE+Y+ P+G S + +V KLNKA+YGLKQA R W++ L+ + +D+ ++I K ++ + +YVDD++ +NN
Subjt: AFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKS--DQLLVAQIYVDDIIFGGFPHDLVNN
Query: FINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKL-YRSIVGNLLY-LTTSRPDIAY
F + +F M+ + E+ F+G++I+ + D I++SQ Y + ++ KF +E T + K+ + ++ D RS++G L+Y + +RPD+
Subjt: FINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKL-YRSIVGNLLY-LTTSRPDIAY
Query: AVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMY
AV I +RY + +++KR+L+Y+ GT D +++
Subjt: AVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-55 | 35.71 | Show/hide |
Query: LNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSA
+ AMQEE+ ++N + LV +G + KW+FK K D + + KARLV +G+ Q +G+DFDE F+PV ++ +IR +L ++ ++ Q+DVK+A
Subjt: LNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSA
Query: FLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSD-QLLVAQIYVDDIIFGGFPHDLVNNFI
FL+ L EE+Y+ QP+GF + V KLNK+LYGLKQAPR WY + +++ + Y + D ++ R S+ ++ +YVDD++ G L+
Subjt: FLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSD-QLLVAQIYVDDIIFGGFPHDLVNNFI
Query: NIMQSEFEMSKVGELSCFLGLQI--KQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLK------LYRSIVGNLLY-LTTSR
+ F+M +G LG++I ++ + +++SQEKY ++++F ++ A+ T A H+KL+K V+ K Y S VG+L+Y + +R
Subjt: NIMQSEFEMSKVGELSCFLGLQI--KQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLK------LYRSIVGNLLY-LTTSR
Query: PDIAYAVGICARYQADPRITHLEDVKRILKYVHGTS
PDIA+AVG+ +R+ +P H E VK IL+Y+ GT+
Subjt: PDIAYAVGICARYQADPRITHLEDVKRILKYVHGTS
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.4e-32 | 32.92 | Show/hide |
Query: MDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDL
MDV +AFLN ++E +YV QP GFV+ +P +V++L +YGLKQAP W + + L+ G+ R E + L+ SD + +YVDD++ +
Subjt: MDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDL
Query: VNNFINIMQSEFEMSKVGELSCFLGLQIKQ-KNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKLYRSIVGNLLY-LTTSRPD
+ + + M +G++ FLGL I Q N DI +S + Y + + + +T L + T D+ Y+SIVG LL+ T RPD
Subjt: VNNFINIMQSEFEMSKVGELSCFLGLQIKQ-KNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKLYRSIVGNLLY-LTTSRPD
Query: IAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMY
I+Y V + +R+ +PR HLE +R+L+Y++ T + Y
Subjt: IAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.9e-65 | 38.55 | Show/hide |
Query: EPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEG-VNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGIS
EP T ALKDE W NAM E+ N+ W LV V ++G +WIF K + G + + KARLVA+GY Q G+D+ ETF+PV + +IR++LG++
Subjt: EPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEG-VNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGIS
Query: CIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSDQLLVAQIYVDDI
+ + + Q+DV +AFL L ++VY++QP GF+D + P +V KL KALYGLKQAPRAWY L YL G+ D +LF+ ++ ++ +YVDDI
Subjt: CIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQAPRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSDQLLVAQIYVDDI
Query: IFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKLYRSIVGNLLY
+ G L++N ++ + F + EL FLG++ K+ + +SQ +Y +++ + + A+ T A KL+ + D YR IVG+L Y
Subjt: IFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKLYRSIVGNLLY
Query: LTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGM
L +RPDI+YAV +++ P HL+ +KRIL+Y+ GT + G+
Subjt: LTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGM
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.0e-64 | 36.41 | Show/hide |
Query: IIQ-QALSLVNHQLGCTRRKD-------KIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLV-SKLEGVNVIGTKWIFKNKTD
IIQ A + VN TR KD K Y +A + EP T A+KD+ W AM E+ N+ W LV V ++G +WIF K +
Subjt: IIQ-QALSLVNHQLGCTRRKD-------KIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLV-SKLEGVNVIGTKWIFKNKTD
Query: ETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQA
G + + KARLVA+GY Q G+D+ ETF+PV + +IR++LG++ + + + Q+DV +AFL L +EVY++QP GFVD + P +V +L KA+YGLKQA
Subjt: ETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQA
Query: PRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNM
PRAWY L YL G+ D +LF+ ++ ++ +YVDDI+ G L+ + ++ + F + + +L FLG++ K+ + +SQ +Y ++
Subjt: PRAWYDRLTVYLRGRGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNM
Query: VKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGM
+ + + A+ T AT KLT + D YR IVG+L YL +RPD++YAV ++Y P H +KR+L+Y+ GT D G+
Subjt: VKKFGLEQARNKRTLAATHVKLTKDTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGM
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.0e-63 | 35.6 | Show/hide |
Query: SLVNHQLGCTRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQ
SL H + +K+ L +C EPST + A + W AM +E+ + W + + IG KW++K K + G + + KARLVA+
Subjt: SLVNHQLGCTRRKDKIDYLKMVADLCYISTIEPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQ
Query: GYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFV----DSEHPKHVYKLNKALYGLKQAPRAWYDRLTVY
GYTQ EG+DF ETF+PV +L +++L+L IS I F L+Q+D+ +AFLN L+EE+Y+ P G+ DS P V L K++YGLKQA R W+ + +V
Subjt: GYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSAFLNEYLNEEVYVAQPKGFV----DSEHPKHVYKLNKALYGLKQAPRAWYDRLTVY
Query: LRGRGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARN
L G G+ + D T F+ + L +YVDDII V+ + ++S F++ +G L FLGL+I + I I Q KYA +++ + GL +
Subjt: LRGRGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARN
Query: KRTLAATHVKLTKDTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYS
V + + G VD K YR ++G L+YL +R DI++AV +++ PR+ H + V +IL Y+ GT G+ YS
Subjt: KRTLAATHVKLTKDTKGAEVDLKLYRSIVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYS
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 2.7e-04 | 36 | Show/hide |
Query: LYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYS
+YLT +RPD+ +AV +++ + R ++ V ++L YV GT G+ YS
Subjt: LYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGMMYS
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.7e-20 | 37.5 | Show/hide |
Query: IYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEV-DLKLYRS
+YVDDI+ G + L+N I + S F M +G + FLG+QIK +F+SQ KYA ++ G+ + T +KL A+ D +RS
Subjt: IYVDDIIFGGFPHDLVNNFINIMQSEFEMSKVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTLAATHVKLTKDTKGAEV-DLKLYRS
Query: IVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGM
IVG L YLT +RPDI+YAV I + +P + + +KR+L+YV GT G+
Subjt: IVGNLLYLTTSRPDIAYAVGICARYQADPRITHLEDVKRILKYVHGTSDFGM
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 3.6e-20 | 43.9 | Show/hide |
Query: TRRKDKIDYLKMVADLCYISTI--EPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEG
TR K I+ L L +TI EP +V ALKD W AMQEEL RN W LV N++G KW+FK K G + + KARLVA+G+ Q EG
Subjt: TRRKDKIDYLKMVADLCYISTI--EPSTVDSALKDEYWLNAMQEELLQFRRNNVWTLVSKLEGVNVIGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEG
Query: VDFDETFAPVARLEAIRLLLGIS
+ F ET++PV R IR +L ++
Subjt: VDFDETFAPVARLEAIRLLLGIS
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