CuGenDBv2

Gene ID	Cmc01g0025331
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase, RNA-dependent DNA polymerase
Genome location	CMiso1.1chr01:26094365..26096159
RNA-Seq Expression	Cmc01g0025331
Synteny	Cmc01g0025331
Gene Ontology terms	GO:0006259 - DNA metabolic process (biological process) GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]

1.7e-85

97.63

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQL TVKLDRKNYLLWKTLALPILK YKLEGHLT ETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG
        VN LFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]

1.2e-88

99.41

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG+
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]

1.2e-88

99.41

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG+
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI

XP_016902204.1 PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo]

1.2e-88

99.41

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG+
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]

1.2e-88

99.41

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG+
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X1

5.9e-89

99.41

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG+
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X4

5.9e-89

99.41

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG+
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X3

5.9e-89

99.41

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG+
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI

A0A1S4E2K3 uncharacterized protein LOC107991581 isoform X5

5.9e-89

99.41

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI
        VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG+
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGI

A0A5A7SIT7 Uncharacterized protein

8.0e-86

97.63

Show/hide

Query:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
        MANAQPTAAPPSLSSAGFSNPPLNQILNQL TVKLDRKNYLLWKTLALPILK YKLEGHLT ETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI
Subjt:  MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRI

Query:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG
        VN LFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG
Subjt:  VNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCAACGCCCAACCTACCGCTGCTCCTCCAAGTTTATCCTCAGCAGGTTTTTCAAATCCTCCTCTAAACCAAATTTTAAATCAACTAACCACTGTGAAACTTGACAG
GAAGAACTATCTTTTGTGGAAAACCCTTGCTCTCCCCATCCTCAAAGACTACAAACTTGAGGGACATCTCACTGCAGAAACACCATGCCCGTCACACTTCGTCTTATCGG
CGTCTAGCTCAAACACTACAGTGACTGAAGAAGGAGCAGACGCAACCATCGGGGCTTCAAGTTCAATCACCCCTCGAATCGTGAATCCGTTGTTCGAGCAATGGGTGACA
ACTGATTTGCTGCTGCTTGGTTGGCTCTACAACTCCATGACACCTGATGTAGCCATTCAGTTAATGGGGTTTACAAATGTTGAGGACTTATGGGATGCAACGCAAGACTT
CTTTGGCGTTCAATCTCGAGCCGAAGAAGATTTTCTTCGTCAAATGTTGCAGACAACAAGGAAAGGTATTGCTAGGCCTTGA

mRNA sequence

Show/hide mRNA sequence

TGGAAAAAATAGAGAAGAAATATTATCTAAAATAGGCCTGCCTAAATCCTTTTCTTGGTACCAGAAGGCATCATGGCCAACGCCCAACCTACCGCTGCTCCTCCAAGTTT
ATCCTCAGCAGGTTTTTCAAATCCTCCTCTAAACCAAATTTTAAATCAACTAACCACTGTGAAACTTGACAGGAAGAACTATCTTTTGTGGAAAACCCTTGCTCTCCCCA
TCCTCAAAGACTACAAACTTGAGGGACATCTCACTGCAGAAACACCATGCCCGTCACACTTCGTCTTATCGGCGTCTAGCTCAAACACTACAGTGACTGAAGAAGGAGCA
GACGCAACCATCGGGGCTTCAAGTTCAATCACCCCTCGAATCGTGAATCCGTTGTTCGAGCAATGGGTGACAACTGATTTGCTGCTGCTTGGTTGGCTCTACAACTCCAT
GACACCTGATGTAGCCATTCAGTTAATGGGGTTTACAAATGTTGAGGACTTATGGGATGCAACGCAAGACTTCTTTGGCGTTCAATCTCGAGCCGAAGAAGATTTTCTTC
GTCAAATGTTGCAGACAACAAGGAAAGGTATTGCTAGGCCTTGATGAAGTTTACAACCTTGCTAGGCCTTGATGAAGTTTACAACCTTGTTATTGTCGTGATTCAAGGGA
AACCAGACATCTCCTGGCTGGATATGCAGTCGAAGCTTCTTATTTTTGAGAAAAGATTGAAACATCAAAATACCCAAAAAAAAAAAAAATACAGGAAACATCACACAGAG
CCCTGCTCTAAATATGGCTCAAAGGTTTGCCTTAAATGGTCAAAGAAATCAAAGTAACAAAAAATTTTATGGTTACAACAGACAACATTTCAGTGGACAGCGAGGAAATC
TCAACAATGGACCAACATGCCAATTATGTGTGGAGCTACTAATCATGTTACTAGAGAATGTTCGAATATGACAAACCCAACTGAATATTCAGGACAAATCTACGGGGAAA
CACTGTTGAGAGGAACACTTAGAGATGGATTTTATCAACTTGAAAGGGTTGGAGTAAAGATAGAAGCTGGAATGGATAGTGAGCAGTAGCTTATGCACAAAAATAAGGGT
ATATCAACTTTTGTATTGTACGGAGGAAAAAATCTTGTTAATACTAAACTTGGTATATCTAAAGCTGTGTGGCATATGAGATTAGGACATCCTTCTTCTAAAATATTGAA
TTTAGTACTAAAGAGTTGTAATCTGGTTGTTTCTAAAAGCAGTGAAATAGAATTTTGTGATTCTTGCCAACTGGGAAAAGCC

Protein sequence

Show/hide protein sequence

MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASSSITPRIVNPLFEQWVT
TDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGIARP

Cmc01g0025331 (gene) of Melon (Charmono) v1.1 genome