; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0025751 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0025751
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-pol polyprotein
Genome locationCMiso1.1chr01:26692297..26693157
RNA-Seq ExpressionCmc01g0025751
SyntenyCmc01g0025751
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO73521.1 gag-pol polyprotein [Glycine max]4.3e-10764.44Show/hide
Query:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP
        MS+VGEL+ FLGLQ+KQ  + IF+SQ +YA+NIVKKF +E + HKRT   TH+K++KD   T+VD  LYRSMI SLLYLTA+RPDI Y VG+CAR+Q+NP
Subjt:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP

Query:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH
        ++S L  VK+I+KYV+ TS +GI+Y +  + +LVG+CD DW   ++DRKSTSGGCF+LGNN+ISW SKK+NCVSLSTAE EYIA GS+C+QL+WMK ML 
Subjt:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH

Query:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC
        EY + QD+MTLYCDN+SAI+ISKNP+QH RTKHIDIRHH+IR L++DK+ITL+ V +  Q+ DIFTK LDA+ FE LR +LG+C
Subjt:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC

AAO73523.1 gag-pol polyprotein [Glycine max]4.3e-10764.79Show/hide
Query:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP
        MS+VGEL+ FLGLQ+KQ  + IF+SQ +YA+NIVKKF +E + HKRT   TH+K++KD   T+VD K YRSMI SLLYLTA+RPDI Y VG+CAR+Q+NP
Subjt:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP

Query:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH
        ++S L  VK+I+KYV+ TS +GI+Y +   S+LVG+CD DW   ++DRKSTSGGCF+LGNN+ISW SKK+NCVSLSTAE EYIA GS+C+QL+WMK ML 
Subjt:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH

Query:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC
        EY + QD+MTLYCDN+SAI+ISKNP+QH RTKHIDIRHH+IR L++DK+ITL+ V +  Q+ DIFTK LDA+ FE LR +LG+C
Subjt:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC

AAO73529.1 gag-pol polyprotein [Glycine max]8.7e-10865.49Show/hide
Query:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP
        MS+VGEL+ FLGLQ+KQ  + IF+SQ KYA+NIVKKF +E + HKRT   TH+K++KD   T+VD  LYRSMI SLLYLTA+RPDI Y VG+CAR+Q+NP
Subjt:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP

Query:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH
        ++S L  VK+I+KYV+ TS +GI+Y +   S+LVG+CD DW   ++DRKSTSGGCF+LGNN+ISW SKK+NCVSLSTAE EYIA GS+C+QL+WMK ML 
Subjt:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH

Query:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC
        EY + QD+MTLYCDN+SAI+ISKNP+QH RTKHIDIRHH+IR L++DK+ITLE V +  Q+ DIFTK LDA  FE LR +LG+C
Subjt:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC

KAA0055610.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.9e-12174.56Show/hide
Query:  MVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNPRV
        MVGELSCFLGLQIK++++GIFISQEKYA+N+VKKF LEQ+R+KRT TATHVK+TKDT D   DHKLYRS++ SLLYLTA+RP+I YVVGICA +Q++PR+
Subjt:  MVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNPRV

Query:  SQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLHEY
        + L AVK+I+KYVH TS FG++YSYD    LVG+CD DW   ++DRKSTSGGCFFLGNN+ISWLSKK+NCVSLST E EYIA GS CTQLIWMKNMLHEY
Subjt:  SQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLHEY

Query:  GITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVCK
        G  QD MTLYCDN SAIDISKNP+QH RTKHIDIRHHFIR L+EDK+I L+ + SN QL DIFTKPLDAS+FE+LRA LGVC+
Subjt:  GITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVCK

MCH79438.1 gag-pol polyprotein [Trifolium medium]3.3e-10766.55Show/hide
Query:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP
        MSMVGEL+ FLGLQ+KQ  + IFISQ KYA+NIVKKF +E S HKRT  ATH+K+TKD   T+VD  +YRSMI SLLYLT +RPDI +VVG+CA++Q+ P
Subjt:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP

Query:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH
        ++S L  VK+I+KYV+ T  +GILYS+  DS L G+CD DW   ++DRKSTSGGCFFLGNN+ISW SKK NCVSLSTAE EYIA GS+C+QL+WMK ML 
Subjt:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH

Query:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC
        EY + QD++TLYCDNLSAI+ISKNPIQH RTKHIDI HHFIR L+E+ +I LE V++  QL DIFTK LDA  FE+LR +LG+C
Subjt:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC

TrEMBL top hitse value%identityAlignment
A0A392LWW5 Gag-pol polyprotein1.6e-10766.55Show/hide
Query:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP
        MSMVGEL+ FLGLQ+KQ  + IFISQ KYA+NIVKKF +E S HKRT  ATH+K+TKD   T+VD  +YRSMI SLLYLT +RPDI +VVG+CA++Q+ P
Subjt:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP

Query:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH
        ++S L  VK+I+KYV+ T  +GILYS+  DS L G+CD DW   ++DRKSTSGGCFFLGNN+ISW SKK NCVSLSTAE EYIA GS+C+QL+WMK ML 
Subjt:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH

Query:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC
        EY + QD++TLYCDNLSAI+ISKNPIQH RTKHIDI HHFIR L+E+ +I LE V++  QL DIFTK LDA  FE+LR +LG+C
Subjt:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC

A0A5D3DLL1 Gag-pol polyprotein3.3e-12174.56Show/hide
Query:  MVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNPRV
        MVGELSCFLGLQIK++++GIFISQEKYA+N+VKKF LEQ+R+KRT TATHVK+TKDT D   DHKLYRS++ SLLYLTA+RP+I YVVGICA +Q++PR+
Subjt:  MVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNPRV

Query:  SQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLHEY
        + L AVK+I+KYVH TS FG++YSYD    LVG+CD DW   ++DRKSTSGGCFFLGNN+ISWLSKK+NCVSLST E EYIA GS CTQLIWMKNMLHEY
Subjt:  SQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLHEY

Query:  GITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVCK
        G  QD MTLYCDN SAIDISKNP+QH RTKHIDIRHHFIR L+EDK+I L+ + SN QL DIFTKPLDAS+FE+LRA LGVC+
Subjt:  GITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVCK

Q84VH6 Gag-pol polyprotein4.2e-10865.49Show/hide
Query:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP
        MS+VGEL+ FLGLQ+KQ  + IF+SQ KYA+NIVKKF +E + HKRT   TH+K++KD   T+VD  LYRSMI SLLYLTA+RPDI Y VG+CAR+Q+NP
Subjt:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP

Query:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH
        ++S L  VK+I+KYV+ TS +GI+Y +   S+LVG+CD DW   ++DRKSTSGGCF+LGNN+ISW SKK+NCVSLSTAE EYIA GS+C+QL+WMK ML 
Subjt:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH

Query:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC
        EY + QD+MTLYCDN+SAI+ISKNP+QH RTKHIDIRHH+IR L++DK+ITLE V +  Q+ DIFTK LDA  FE LR +LG+C
Subjt:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC

Q84VH8 Gag-pol polyprotein2.1e-10764.44Show/hide
Query:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP
        MS+VGEL+ FLGLQ+KQ  + IF+SQ +YA+NIVKKF +E + HKRT   TH+K++KD   T+VD  LYRSMI SLLYLTA+RPDI Y VG+CAR+Q+NP
Subjt:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP

Query:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH
        ++S L  VK+I+KYV+ TS +GI+Y +  + +LVG+CD DW   ++DRKSTSGGCF+LGNN+ISW SKK+NCVSLSTAE EYIA GS+C+QL+WMK ML 
Subjt:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH

Query:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC
        EY + QD+MTLYCDN+SAI+ISKNP+QH RTKHIDIRHH+IR L++DK+ITL+ V +  Q+ DIFTK LDA+ FE LR +LG+C
Subjt:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC

Q84VI4 Gag-pol polyprotein2.1e-10764.44Show/hide
Query:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP
        MS+VGEL+ FLGLQ+KQ  + IF+SQ +YA+NIVKKF +E + HKRT   TH+K++KD   T+VD  LYRSMI SLLYLTA+RPDI Y VG+CAR+Q+NP
Subjt:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNP

Query:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH
        ++S L  VK+I+KYV+ TS +GI+Y +  + +LVG+CD DW   ++DRKSTSGGCF+LGNN+ISW SKK+NCVSLSTAE EYIA GS+C+QL+WMK ML 
Subjt:  RVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLH

Query:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC
        EY + QD+MTLYCDN+SAI+ISKNP+QH RTKHIDIRHH+IR L++DK+ITL+ V +  Q+ DIFTK LDA+ FE LR +LG+C
Subjt:  EYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVC

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.2e-3832.29Show/hide
Query:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLY-LTATRPDIVYVVGICARFQSN
        M+ + E+  F+G++I+ + + I++SQ  Y + I+ KF +E      T   + +      +D   +    RS+I  L+Y +  TRPD+   V I +R+ S 
Subjt:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLY-LTATRPDIVYVVGICARFQSN

Query:  PRVSQLAAVKKIIKYVHETSAFGILYSYDR--DSILVGFCDTDWVDFSNDRKSTSGGCFFLGN-NIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMK
                +K++++Y+  T    +++  +   ++ ++G+ D+DW     DRKST+G  F + + N+I W +K++N V+ S+ E EY+A   A  + +W+K
Subjt:  PRVSQLAAVKKIIKYVHETSAFGILYSYDR--DSILVGFCDTDWVDFSNDRKSTSGGCFFLGN-NIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMK

Query:  NMLHEYGI-TQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGV
         +L    I  ++ + +Y DN   I I+ NP  H R KHIDI++HF R  +++ +I LE + +  QL DIFTKPL A+ F  LR +LG+
Subjt:  NMLHEYGI-TQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.9e-4735.96Show/hide
Query:  MSMVGELSCFLGLQI--KQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHK------LYRSMIKSLLY-LTATRPDIVYVVG
        M  +G     LG++I  ++ S  +++SQEKY   ++++F ++ ++   T  A H+K++K    TTV+ K       Y S + SL+Y +  TRPDI + VG
Subjt:  MSMVGELSCFLGLQI--KQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHK------LYRSMIKSLLY-LTATRPDIVYVVG

Query:  ICARFQSNPRVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQ
        + +RF  NP      AVK I++Y+  T+   + +    D IL G+ D D     ++RKS++G  F      ISW SK + CV+LST E EYIA      +
Subjt:  ICARFQSNPRVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQ

Query:  LIWMKNMLHEYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGV
        +IW+K  L E G+ Q    +YCD+ SAID+SKN + H RTKHID+R+H+IR +++D+ + +  + +N    D+ TK +  + FE  +  +G+
Subjt:  LIWMKNMLHEYGITQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGV

P92519 Uncharacterized mitochondrial protein AtMg008105.6e-2534.87Show/hide
Query:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTV-DHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSN
        M  +G +  FLG+QIK    G+F+SQ KYA  I+    +     K   T   +K+    +     D   +RS++ +L YLT TRPDI Y V I  +    
Subjt:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTV-DHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSN

Query:  PRVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIW
        P ++    +K++++YV  T   G+    +    +  FCD+DW   ++ R+ST+G C FLG NIISW +K++  VS S+ E EY A      +L W
Subjt:  PRVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.9e-3932.27Show/hide
Query:  ELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNPRVSQL
        EL  FLG++ K+   G+ +SQ +Y  +++ +  +  ++   T  A   K++  +     D   YR ++ SL YL  TRPDI Y V   ++F   P    L
Subjt:  ELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNPRVSQL

Query:  AAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLHEYGI-
         A+K+I++Y+  T   GI         L  + D DW    +D  ST+G   +LG++ ISW SKK+  V  S+ E EY +  +  +++ W+ ++L E GI 
Subjt:  AAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLHEYGI-

Query:  TQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVCKI
              +YCDN+ A  +  NP+ H R KHI I +HFIR  ++   + +  V ++ QL D  TKPL  + F++  +++GV ++
Subjt:  TQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVCKI

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-3831.56Show/hide
Query:  ELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNPRVSQL
        +L  FLG++ K+  +G+ +SQ +Y  +++ +  +  ++   T  AT  K+T  +     D   YR ++ SL YL  TRPD+ Y V   +++   P     
Subjt:  ELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNPRVSQL

Query:  AAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLHEYGI-
         A+K++++Y+  T   GI         L  + D DW   ++D  ST+G   +LG++ ISW SKK+  V  S+ E EY +  +  ++L W+ ++L E GI 
Subjt:  AAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLHEYGI-

Query:  TQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVCKI
              +YCDN+ A  +  NP+ H R KHI + +HFIR  ++   + +  V ++ QL D  TKPL    F++   ++GV K+
Subjt:  TQDIMTLYCDNLSAIDISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVCKI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.1e-3536.25Show/hide
Query:  VGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNPRVS
        +G L  FLGL+I + + GI I Q KYA +++ +  L   +         V  +  +    VD K YR +I  L+YL  TR DI + V   ++F   PR++
Subjt:  VGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNPRVS

Query:  QLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLHEYG
           AV KI+ Y+  T   G+ YS   +  L  F D  +    + R+ST+G C FLG ++ISW SKK+  VS S+AE EY A   A  +++W+     E  
Subjt:  QLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLHEYG

Query:  ITQDIMT-LYCDNLSAIDISKNPIQHGRTKHIDIRHHFIR
        +     T L+CDN +AI I+ N + H RTKHI+   H +R
Subjt:  ITQDIMT-LYCDNLSAIDISKNPIQHGRTKHIDIRHHFIR

ATMG00810.1 DNA/RNA polymerases superfamily protein4.0e-2634.87Show/hide
Query:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTV-DHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSN
        M  +G +  FLG+QIK    G+F+SQ KYA  I+    +     K   T   +K+    +     D   +RS++ +L YLT TRPDI Y V I  +    
Subjt:  MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTV-DHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSN

Query:  PRVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIW
        P ++    +K++++YV  T   G+    +    +  FCD+DW   ++ R+ST+G C FLG NIISW +K++  VS S+ E EY A      +L W
Subjt:  PRVSQLAAVKKIIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATGGTGGGAGAATTGTCTTGTTTTCTGGGACTACAAATCAAACAGAGAAGTGAGGGTATATTTATATCTCAAGAGAAGTATGCGAGGAACATAGTTAAAAAATT
TGAGTTGGAACAATCTCGACACAAACGAACTCTAACTGCGACACATGTAAAAATTACCAAAGATACAAATGATACAACAGTAGATCATAAGCTTTACAGGAGCATGATTA
AGAGTCTATTGTACTTAACGGCCACTAGACCTGACATTGTCTATGTCGTTGGAATATGTGCTCGATTTCAGTCTAATCCTCGAGTTTCACAGTTAGCGGCAGTTAAAAAG
ATAATTAAGTATGTTCACGAAACAAGTGCTTTTGGAATTCTATATTCCTATGATAGGGATTCTATTTTGGTAGGATTTTGCGACACAGATTGGGTCGACTTTTCTAATGA
CAGGAAAAGTACATCTGGAGGATGTTTCTTTCTTGGAAATAATATTATCTCTTGGCTTAGTAAGAAACGAAATTGTGTATCTTTATCCACTGCAGAGGTTGAATATATTG
CAGAAGGGAGTGCATGTACCCAATTGATATGGATGAAAAATATGCTGCATGAGTATGGGATTACGCAGGATATTATGACTCTATACTGTGATAATTTGAGTGCTATTGAT
ATATCAAAAAATCCAATTCAACATGGTCGCACCAAACATATTGATATTAGACATCATTTTATTAGAGGGCTCATTGAAGATAAGATTATTACACTGGAAGATGTTCATTC
GAATTTTCAACTAACAGATATTTTTACCAAGCCTCTTGATGCGAGCACATTTGAGCACTTACGCGCTGAATTAGGAGTTTGTAAAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATGGTGGGAGAATTGTCTTGTTTTCTGGGACTACAAATCAAACAGAGAAGTGAGGGTATATTTATATCTCAAGAGAAGTATGCGAGGAACATAGTTAAAAAATT
TGAGTTGGAACAATCTCGACACAAACGAACTCTAACTGCGACACATGTAAAAATTACCAAAGATACAAATGATACAACAGTAGATCATAAGCTTTACAGGAGCATGATTA
AGAGTCTATTGTACTTAACGGCCACTAGACCTGACATTGTCTATGTCGTTGGAATATGTGCTCGATTTCAGTCTAATCCTCGAGTTTCACAGTTAGCGGCAGTTAAAAAG
ATAATTAAGTATGTTCACGAAACAAGTGCTTTTGGAATTCTATATTCCTATGATAGGGATTCTATTTTGGTAGGATTTTGCGACACAGATTGGGTCGACTTTTCTAATGA
CAGGAAAAGTACATCTGGAGGATGTTTCTTTCTTGGAAATAATATTATCTCTTGGCTTAGTAAGAAACGAAATTGTGTATCTTTATCCACTGCAGAGGTTGAATATATTG
CAGAAGGGAGTGCATGTACCCAATTGATATGGATGAAAAATATGCTGCATGAGTATGGGATTACGCAGGATATTATGACTCTATACTGTGATAATTTGAGTGCTATTGAT
ATATCAAAAAATCCAATTCAACATGGTCGCACCAAACATATTGATATTAGACATCATTTTATTAGAGGGCTCATTGAAGATAAGATTATTACACTGGAAGATGTTCATTC
GAATTTTCAACTAACAGATATTTTTACCAAGCCTCTTGATGCGAGCACATTTGAGCACTTACGCGCTGAATTAGGAGTTTGTAAAATTTAA
Protein sequenceShow/hide protein sequence
MSMVGELSCFLGLQIKQRSEGIFISQEKYARNIVKKFELEQSRHKRTLTATHVKITKDTNDTTVDHKLYRSMIKSLLYLTATRPDIVYVVGICARFQSNPRVSQLAAVKK
IIKYVHETSAFGILYSYDRDSILVGFCDTDWVDFSNDRKSTSGGCFFLGNNIISWLSKKRNCVSLSTAEVEYIAEGSACTQLIWMKNMLHEYGITQDIMTLYCDNLSAID
ISKNPIQHGRTKHIDIRHHFIRGLIEDKIITLEDVHSNFQLTDIFTKPLDASTFEHLRAELGVCKI