CuGenDBv2

Gene ID	Cmc01g0026331
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	charged multivesicular body protein 7
Genome location	CMiso1.1chr01:27296540..27298112
RNA-Seq Expression	Cmc01g0026331
Synteny	Cmc01g0026331
Gene Ontology terms	GO:0006900 - vesicle budding from membrane (biological process) GO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process) GO:0000815 - ESCRT III complex (cellular component) GO:0005771 - multivesicular body (cellular component) GO:0009898 - cytoplasmic side of plasma membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0050281.1 charged multivesicular body protein 7 isoform X2 [Cucumis melo var. makuwa]

5.9e-14

88.64

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        YLFWR LILTV RQ NFLIIKPSEIK+QWF+RGGLTPLCLDHVL
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

KGN50975.2 hypothetical protein Csa_017819 [Cucumis sativus]

2.6e-14

90.91

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        YLFWR LILTV RQFNFLIIKPSEIK+QWF RGGLTPLCLDHVL
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

XP_008466425.1 PREDICTED: charged multivesicular body protein 7 isoform X1 [Cucumis melo]

5.9e-14

88.64

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        YLFWR LILTV RQ NFLIIKPSEIK+QWF+RGGLTPLCLDHVL
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

XP_008466468.1 PREDICTED: charged multivesicular body protein 7 isoform X2 [Cucumis melo]

5.9e-14

88.64

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        YLFWR LILTV RQ NFLIIKPSEIK+QWF+RGGLTPLCLDHVL
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

XP_011654554.1 charged multivesicular body protein 7 [Cucumis sativus]

2.6e-14

90.91

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        YLFWR LILTV RQFNFLIIKPSEIK+QWF RGGLTPLCLDHVL
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KMY2 Uncharacterized protein

1.3e-14

90.91

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        YLFWR LILTV RQFNFLIIKPSEIK+QWF RGGLTPLCLDHVL
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

A0A1S3CRA4 charged multivesicular body protein 7 isoform X1

2.8e-14

88.64

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        YLFWR LILTV RQ NFLIIKPSEIK+QWF+RGGLTPLCLDHVL
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

A0A1S3CRC5 charged multivesicular body protein 7 isoform X2

2.8e-14

88.64

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        YLFWR LILTV RQ NFLIIKPSEIK+QWF+RGGLTPLCLDHVL
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

A0A5D3BGE9 Charged multivesicular body protein 7 isoform X2

2.8e-14

88.64

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        YLFWR LILTV RQ NFLIIKPSEIK+QWF+RGGLTPLCLDHVL
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

A0A6J1FF90 charged multivesicular body protein 7

9.1e-13

77.27

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        YLFWR LILT+  QFNF+ +KPSEIK+QWF+RGGL PLCLDHVL
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G62080.1 SNF7 family protein

1.2e-09

54.55

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        + FWR LI+ V RQF   II P ++K  WF RGG+TPLC+D V+
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

AT3G62080.2 SNF7 family protein

1.2e-09

54.55

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Query:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL
        + FWR LI+ V RQF   II P ++K  WF RGG+TPLC+D V+
Subjt:  YLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVL

Sequences

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CDS sequence

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ATGTACTTATTTTGGAGAGGTTTGATACTCACAGTTGTCCGTCAATTCAACTTCCTTATTATAAAACCTTCTGAAATAAAGGATCAATGGTTTACTCGAGGAGGGTTGAC
TCCATTGTGCCTTGATCATGTTCTGTTCACCATTTCATTCAACATCTATTGGATACTGGAGGTGATATCATAA

mRNA sequence

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CTAAAATAATGAATATATTTAAAAAGTTTAGTGACCTTGTGTAATCAGGATCCATTCTATTGGTCGTATCTATGTCATTGGGTTCCAAGAATGTGTTAAAAGATTTATAT
ACTTGTTGAAGTTGAACACTCTGAGATGGGTCAGTGATCTCCCTTTTCCGTGGGGAAACTAGGTTACGTGTTTCATAGTTCCAGAGTGTACTGATTTTGTCTTTATTTCT
CTTTCTCCCTGTCTCTCTTTCTTTATGTAGGAATTTCTTTGATTTAAATCTTCCAGTCTCTAGATGCCTTTTCTGTTGGTTATCAACTATTGGCATCAAGTAGCGGAGAA
CTTTTCTCAATGCAAGGACTTTTTTCTCTGTACAGTTCTTAATGCTCTCTCAGAATTATCTTTGTTGTGCACAATGAAACTATTAGTTGATGAAATTATCTTTGGGTGGG
TATGACGTGTAAAGCATCTTATTTAAGTGTTTAGAAGTTGTTGGATGCTTAACGGACTAATAGGAAGGTCATGATCTTTTTGTACTAACCTACAATATGAAATTACTTGA
AAACATGTAAAGGAAGTATCCAGAATTATCATACATATTTTTGCTAACTCATGGTTTACACAGTTCGATTTGGCTAGGTTGCAGTCGTGGCGCTATTCTTTGGCATGAAC
AGTGGTAACAAAATGGAAAAGGAATCAAAGGGCTCTCGCGTAAGAGAGTTCATGAGGGAAAATTAAAGTCACAGATTGGGATGATGAAGTGGTGGCTATAGCTTAGTTTA
AGGCATTTAGTGGGTAGAAATCTGATTGAGAACCCATGTACTTATTTTGGAGAGGTTTGATACTCACAGTTGTCCGTCAATTCAACTTCCTTATTATAAAACCTTCTGAA
ATAAAGGATCAATGGTTTACTCGAGGAGGGTTGACTCCATTGTGCCTTGATCATGTTCTGTTCACCATTTCATTCAACATCTATTGGATACTGGAGGTGATATCATAAGA
CATAGTGACATGTTGGATCCAAGGAGTGGCCAACTCTCTTACATGTTTAAAAAACTAAGCAATTTGATGGTAATTGGACCTCGTCTTATATTATTGCAATGGTGAAGTTC
CAAAACATATGTGGAGGACTTGATGAAGCAACTATTATCTTGAGCTACTTGATTGAGTGTGGTAAAGAAAAATTTCTCTGTAAGGGAAAAACGGAACTTCTAGAGGTATG
TCATTA

Protein sequence

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MYLFWRGLILTVVRQFNFLIIKPSEIKDQWFTRGGLTPLCLDHVLFTISFNIYWILEVIS

Cmc01g0026331 (gene) of Melon (Charmono) v1.1 genome