| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0038017.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-59 | 88.24 | Show/hide |
Query: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
MNVKAR GYEYFISFIDD SRYGHVYLIQNKS+SFEKFKEYKA+VENESGKTIK RSDRGGEYMDL+FQDYLIEHGIQ +LSAP+ PQQNGV ERRNRT
Subjt: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
Query: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
LLDMV SMMSFAQLPDSFW YALET+IYILNNV SK
Subjt: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
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| KAA0040307.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-60 | 88.97 | Show/hide |
Query: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
MNVKARGGYEYFI+FIDD SRYGHVYLIQNKS+SFEKFKEYKAEVENESGK IK LRSDRGGEYMDL+FQDYLIEHGIQ +LSAP+ PQ NGVSERRNRT
Subjt: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
Query: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
LLDMV SMMSFAQLPDSFW YALET IYILNNV SK
Subjt: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
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| KAA0052874.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-59 | 86.03 | Show/hide |
Query: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
MNVKARGGYEYFISFIDD SRYGH+YLIQNKS+SFEKFKEYKA+VENESGKTIK LRSD+GG+YMDLQFQDYLIEHGIQ +LSAP+MPQQNGVSERRN+T
Subjt: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
Query: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
LLDMV S+MSF+QLP SFW Y LET IYILNNV SK
Subjt: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
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| KAA0059674.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 1.5e-68 | 97.06 | Show/hide |
Query: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
MNVKARGGY+YFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGV ERRNRT
Subjt: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
Query: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
LLDMVCSMMS AQLPDSFW YALETTIYILNNVLSK
Subjt: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
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| TYK14486.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-59 | 86.03 | Show/hide |
Query: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
MNVKARGGYEYFISFIDD SRYGH+YLIQNKS+SFEKFKEYKA+VENESGKTIK LRSD+GG+YMDLQFQDYLIEHGIQ +LSAP+MPQQNGVSERRN+T
Subjt: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
Query: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
LLDMV S+MSF+QLP SFW Y LET IYILNNV SK
Subjt: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TFI0 Gag/pol protein | 9.4e-61 | 88.97 | Show/hide |
Query: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
MNVKARGGYEYFI+FIDD SRYGHVYLIQNKS+SFEKFKEYKAEVENESGK IK LRSDRGGEYMDL+FQDYLIEHGIQ +LSAP+ PQ NGVSERRNRT
Subjt: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
Query: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
LLDMV SMMSFAQLPDSFW YALET IYILNNV SK
Subjt: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
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| A0A5A7UC33 Gag/pol protein | 1.4e-59 | 86.03 | Show/hide |
Query: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
MNVKARGGYEYFISFIDD SRYGH+YLIQNKS+SFEKFKEYKA+VENESGKTIK LRSD+GG+YMDLQFQDYLIEHGIQ +LSAP+MPQQNGVSERRN+T
Subjt: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
Query: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
LLDMV S+MSF+QLP SFW Y LET IYILNNV SK
Subjt: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
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| A0A5A7UX57 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 7.1e-69 | 97.06 | Show/hide |
Query: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
MNVKARGGY+YFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGV ERRNRT
Subjt: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
Query: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
LLDMVCSMMS AQLPDSFW YALETTIYILNNVLSK
Subjt: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
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| A0A5D3BTT1 Gag/pol protein | 6.1e-60 | 88.24 | Show/hide |
Query: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
MNVKAR GYEYFISFIDD SRYGHVYLIQNKS+SFEKFKEYKA+VENESGKTIK RSDRGGEYMDL+FQDYLIEHGIQ +LSAP+ PQQNGV ERRNRT
Subjt: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
Query: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
LLDMV SMMSFAQLPDSFW YALET+IYILNNV SK
Subjt: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
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| A0A5D3CVQ7 Gag/pol protein | 1.4e-59 | 86.03 | Show/hide |
Query: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
MNVKARGGYEYFISFIDD SRYGH+YLIQNKS+SFEKFKEYKA+VENESGKTIK LRSD+GG+YMDLQFQDYLIEHGIQ +LSAP+MPQQNGVSERRN+T
Subjt: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
Query: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
LLDMV S+MSF+QLP SFW Y LET IYILNNV SK
Subjt: LLDMVCSMMSFAQLPDSFWRYALETTIYILNNVLSK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.6e-17 | 35.71 | Show/hide |
Query: YFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRTLLDMVCSMMS
YF+ F+D + Y YLI+ KS+ F F+++ A+ E + L D G EY+ + + + ++ GI L+ P+ PQ NGVSER RT+ + +M+S
Subjt: YFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRTLLDMVCSMMS
Query: FAQLPDSFWRYALETTIYILNNVLSK
A+L SFW A+ T Y++N + S+
Subjt: FAQLPDSFWRYALETTIYILNNVLSK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.2e-30 | 45.04 | Show/hide |
Query: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
M +++ GG +YF++FIDD SR VY+++ K F+ F+++ A VE E+G+ +K LRSD GGEY +F++Y HGI+ + + P PQ NGV+ER NRT
Subjt: MNVKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRT
Query: LLDMVCSMMSFAQLPDSFWRYALETTIYILN
+++ V SM+ A+LP SFW A++T Y++N
Subjt: LLDMVCSMMSFAQLPDSFWRYALETTIYILN
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| Q07163 Transposon TyH3 Gag-Pol polyprotein | 3.3e-10 | 28.68 | Show/hide |
Query: YFISFIDDCSRYGHVYLIQNK--SNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRTLLDMVCSM
YFISF D+ +++ VY + ++ + + F A ++N+ ++ +++ DRG EY + +L ++GI + + +GV+ER NRTLLD +
Subjt: YFISFIDDCSRYGHVYLIQNK--SNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRTLLDMVCSM
Query: MSFAQLPDSFWRYALETTIYILNNVLSKK
+ + LP+ W A+E + + N++ S K
Subjt: MSFAQLPDSFWRYALETTIYILNNVLSKK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.7e-17 | 32.06 | Show/hide |
Query: VKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRTLL
+ + Y Y++ F+D +RY +Y ++ KS E F +K +EN I SD GGE++ L +Y +HGI S P+ P+ NG+SER++R ++
Subjt: VKARGGYEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRTLL
Query: DMVCSMMSFAQLPDSFWRYALETTIYILNNV
+ +++S A +P ++W YA +Y++N +
Subjt: DMVCSMMSFAQLPDSFWRYALETTIYILNNV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.8e-19 | 36.8 | Show/hide |
Query: YEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRTLLDMVCSM
Y Y++ F+D +RY +Y ++ KS + F +K+ VEN I L SD GGE++ L +DYL +HGI S P+ P+ NG+SER++R +++M ++
Subjt: YEYFISFIDDCSRYGHVYLIQNKSNSFEKFKEYKAEVENESGKTIKILRSDRGGEYMDLQFQDYLIEHGIQLKLSAPNMPQQNGVSERRNRTLLDMVCSM
Query: MSFAQLPDSFWRYALETTIYILNNV
+S A +P ++W YA +Y++N +
Subjt: MSFAQLPDSFWRYALETTIYILNNV
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