| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 4.2e-78 | 88.02 | Show/hide |
Query: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
MNDVD DQWIKAM+LEME MY NSVWTLVD PS V+PIGCKWIY RKRDQAGKVQTFKARLVAKGYTQKEG+DYEETFSPVAM+KS RILLSIATFY+YE
Subjt: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
Query: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
IWQ+DVKT FLNGNLEE IYMVQ EGFI + QEQKVCKLQKSIYGLKQASRSWNI FDTAIKSYGFE
Subjt: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
|
|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 2.6e-75 | 83.83 | Show/hide |
Query: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
MNDVD DQW+KAMDLEME MY NSVW LVD P V+PIGCKWIY RKRD AGKVQTFKARLVAKGYTQ+EG+DYEETFSPVAM+KS RILLSIATFYDYE
Subjt: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
Query: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
IWQ+DVKT FLNGNLEE I+M Q EGFI +GQEQKVCKL +SIYGLKQASRSWNI FDTAIKSYGF+
Subjt: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
|
|
| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 3.4e-80 | 89.16 | Show/hide |
Query: NDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEI
NDVD DQWIKAMDL+ME MYSNSVWTLVDQP+ +RPIGCKWIY RKRDQ KVQTF+ARLVAKGYTQKEGIDYEETFSP+AMIKS RILLSIATFYDYEI
Subjt: NDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEI
Query: WQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
WQ+DVKT FLNGNLEE IYMVQ EGFIQKGQEQKVCKLQKSIYGLKQASRSWNI FDT IKSYGFE
Subjt: WQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
|
|
| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 2.6e-75 | 83.83 | Show/hide |
Query: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
MNDVD DQW+KAMDLEME MY NSVW LVD P V+PIGCKWIY RKRD AGKVQTFKARLVAKGYTQ+EG+DYEETFSPVAM+KS RILLSIATFYDYE
Subjt: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
Query: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
IWQ+DVKT FLNGNLEE I+M Q EGFI +GQEQKVCKL +SIYGLKQASRSWNI FDTAIKSYGF+
Subjt: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
|
|
| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 2.6e-75 | 83.83 | Show/hide |
Query: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
MNDVD DQW+KAMDLEME MY NSVW LVD P V+PIGCKWIY RKRD AGKVQTFKARLVAKGYTQ+EG+DYEETFSPVAM+KS RILLSIATFYDYE
Subjt: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
Query: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
IWQ+DVKT FLNGNLEE I+M Q EGFI +GQEQKVCKL +SIYGLKQASRSWNI FDTAIKSYGF+
Subjt: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 1.7e-80 | 89.16 | Show/hide |
Query: NDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEI
NDVD DQWIKAMDL+ME MYSNSVWTLVDQP+ +RPIGCKWIY RKRDQ KVQTF+ARLVAKGYTQKEGIDYEETFSP+AMIKS RILLSIATFYDYEI
Subjt: NDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEI
Query: WQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
WQ+DVKT FLNGNLEE IYMVQ EGFIQKGQEQKVCKLQKSIYGLKQASRSWNI FDT IKSYGFE
Subjt: WQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
|
|
| A0A5A7TZD0 Gag/pol protein | 1.2e-75 | 83.83 | Show/hide |
Query: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
MNDVD DQW+KAMDLEME MY NSVW LVD P V+PIGCKWIY RKRD AGKVQTFKARLVAKGYTQ+EG+DYEETFSPVAM+KS RILLSIATFYDYE
Subjt: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
Query: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
IWQ+DVKT FLNGNLEE I+M Q EGFI +GQEQKVCKL +SIYGLKQASRSWNI FDTAIKSYGF+
Subjt: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
|
|
| A0A5A7UYE8 Gag/pol protein | 1.2e-75 | 83.83 | Show/hide |
Query: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
MNDVD DQW+KAMDLEME MY NSVW LVD P V+PIGCKWIY RKRD AGKVQTFKARLVAKGYTQ+EG+DYEETFSPVAM+KS RILLSIATFYDYE
Subjt: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
Query: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
IWQ+DVKT FLNGNLEE I+M Q EGFI +GQEQKVCKL +SIYGLKQASRSWNI FDTAIKSYGF+
Subjt: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
|
|
| A0A5D3CYF4 Gag/pol protein | 1.2e-75 | 83.83 | Show/hide |
Query: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
MNDVD DQW+KAMDLEME MY NSVW LVD P V+PIGCKWIY RKRD AGKVQTFKARLVAKGYTQ+EG+DYEETFSPVAM+KS RILLSIATFYDYE
Subjt: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
Query: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
IWQ+DVKT FLNGNLEE I+M Q EGFI +GQEQKVCKL +SIYGLKQASRSWNI FDTAIKSYGF+
Subjt: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
|
|
| E2GK51 Gag/pol protein (Fragment) | 2.0e-78 | 88.02 | Show/hide |
Query: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
MNDVD DQWIKAM+LEME MY NSVWTLVD PS V+PIGCKWIY RKRDQAGKVQTFKARLVAKGYTQKEG+DYEETFSPVAM+KS RILLSIATFY+YE
Subjt: MNDVDCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYE
Query: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
IWQ+DVKT FLNGNLEE IYMVQ EGFI + QEQKVCKLQKSIYGLKQASRSWNI FDTAIKSYGFE
Subjt: IWQLDVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGFE
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.6e-32 | 43.21 | Show/hide |
Query: DCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEIWQL
D W +A++ E+ N+ WT+ +P + +W+++ K ++ G +KARLVA+G+TQK IDYEETF+PVA I S R +LS+ Y+ ++ Q+
Subjt: DCDQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEIWQL
Query: DVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGF
DVKT FLNG L+E IYM +G VCKL K+IYGLKQA+R W +F+ A+K F
Subjt: DVKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGF
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-39 | 51.59 | Show/hide |
Query: DQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEIWQLDV
+Q +KAM EME + N + LV+ P RP+ CKW++ K+D K+ +KARLV KG+ QK+GID++E FSPV + S R +LS+A D E+ QLDV
Subjt: DQWIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEIWQLDV
Query: KTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKS
KT FL+G+LEE IYM Q EGF G++ VCKL KS+YGLKQA R W + FD+ +KS
Subjt: KTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKS
|
|
| P92520 Uncharacterized mitochondrial protein AtMg00820 | 9.9e-14 | 40.7 | Show/hide |
Query: WIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIA
W +AM E++ + N W LV P +GCKW++ K G + KARLVAKG+ Q+EGI + ET+SPV + R +L++A
Subjt: WIKAMDLEMEFMYSNSVWTLVDQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIA
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.0e-34 | 45.34 | Show/hide |
Query: DQWIKAMDLEMEFMYSNSVWTLV-DQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEIWQLD
++W AM E+ N W LV PS V +GC+WI+T+K + G + +KARLVAKGY Q+ G+DY ETFSPV S RI+L +A + I QLD
Subjt: DQWIKAMDLEMEFMYSNSVWTLV-DQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEIWQLD
Query: VKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGF
V FL G L + +YM Q GFI K + VCKL+K++YGLKQA R+W + + + GF
Subjt: VKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGF
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-34 | 45.34 | Show/hide |
Query: DQWIKAMDLEMEFMYSNSVWTLV-DQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEIWQLD
D+W +AM E+ N W LV P V +GC+WI+T+K + G + +KARLVAKGY Q+ G+DY ETFSPV S RI+L +A + I QLD
Subjt: DQWIKAMDLEMEFMYSNSVWTLV-DQPSKVRPIGCKWIYTRKRDQAGKVQTFKARLVAKGYTQKEGIDYEETFSPVAMIKSTRILLSIATFYDYEIWQLD
Query: VKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGF
V FL G L + +YM Q GF+ K + VC+L+K+IYGLKQA R+W + T + + GF
Subjt: VKTGFLNGNLEEIIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIIFDTAIKSYGF
|
|
