; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0027191 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0027191
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationCMiso1.1chr01:28284538..28285260
RNA-Seq ExpressionCmc01g0027191
SyntenyCmc01g0027191
Gene Ontology termsNA
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045362.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.3e-11790.42Show/hide
Query:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
        MSTSLDLYTIAPPFNDP LY RL+GSLQYLTFT PDIA  VNR SQFMHKPTVIHFS VKRILRYLCGTP  GIKFRK  FSLQTFCD DWA DTSDRRS
Subjt:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS

Query:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
        TS FIAFLGSNPISWSSKKQS VSRSSTEAEYCSLATTT DLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFV +KVL KD
Subjt:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD

Query:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
        ISI YI+SNNQLADILTKPLLSPTFLHLRDKLLTQ ESSV
Subjt:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV

KAA0059709.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.7e-10987.08Show/hide
Query:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
        MSTSLDLYTIAPPFNDPSLYHRL+GSLQYLTFT PDIAFFVNRASQFMHKPTVIHFSTVKRILRYLC                         GDTSDRRS
Subjt:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS

Query:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
        TSSFIAFLGSNPISWSSKKQSTVS SSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVR+KV+RKD
Subjt:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD

Query:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
        ISI YIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
Subjt:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV

TYK08058.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.5e-9780Show/hide
Query:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
        MSTSLDLYTIAPPFNDPSLY RL+GSLQYLTFT PDIAF VNR SQFMHKPTVIHFS VKRILRYL                          GDTSD+RS
Subjt:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS

Query:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
        TS FIAFL SNPISWSSKKQ TVSRSSTEAEY SLATTT DLYWI+QLLCDLHVPLKTS TLWCDNV AISLAHNPVFHARTKHIEIDYHFVR+KV+RKD
Subjt:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD

Query:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
        I IRY+ SNNQLADILTKPLL PTFLHLRDKLLTQ ESSV
Subjt:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV

XP_016901044.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]2.3e-133100Show/hide
Query:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
        MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
Subjt:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS

Query:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
        TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
Subjt:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD

Query:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
        ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
Subjt:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV

XP_016902250.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]1.1e-11187.5Show/hide
Query:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
        MSTSLDLYTIAPPFNDPS+Y RL+GSLQYLTFT PDIAFFVN  SQF+HKPTVIHFS VKRILRYL GTP  GIKFRK  FSLQTFCD +WAGDT DR S
Subjt:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS

Query:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
        TS FIAFLGSNPISWSSKKQSTVSRSSTEAEY SLATTTVDLYWIRQL+CDLHVPLKTSPTLW DNVSAISLAHNP+FHAR KHI+IDYHFV KKVLRKD
Subjt:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD

Query:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
        IS RYI SNNQLADILTKPLLSPTFL LRDKLLTQ +SSV
Subjt:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV

TrEMBL top hitse value%identityAlignment
A0A1S4DYI8 uncharacterized mitochondrial protein AtMg00810-like1.1e-133100Show/hide
Query:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
        MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
Subjt:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS

Query:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
        TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
Subjt:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD

Query:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
        ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
Subjt:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV

A0A1S4E2P5 uncharacterized mitochondrial protein AtMg00810-like5.3e-11287.5Show/hide
Query:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
        MSTSLDLYTIAPPFNDPS+Y RL+GSLQYLTFT PDIAFFVN  SQF+HKPTVIHFS VKRILRYL GTP  GIKFRK  FSLQTFCD +WAGDT DR S
Subjt:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS

Query:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
        TS FIAFLGSNPISWSSKKQSTVSRSSTEAEY SLATTTVDLYWIRQL+CDLHVPLKTSPTLW DNVSAISLAHNP+FHAR KHI+IDYHFV KKVLRKD
Subjt:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD

Query:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
        IS RYI SNNQLADILTKPLLSPTFL LRDKLLTQ +SSV
Subjt:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV

A0A5A7TPR4 Putative mitochondrial protein1.1e-11790.42Show/hide
Query:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
        MSTSLDLYTIAPPFNDP LY RL+GSLQYLTFT PDIA  VNR SQFMHKPTVIHFS VKRILRYLCGTP  GIKFRK  FSLQTFCD DWA DTSDRRS
Subjt:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS

Query:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
        TS FIAFLGSNPISWSSKKQS VSRSSTEAEYCSLATTT DLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFV +KVL KD
Subjt:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD

Query:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
        ISI YI+SNNQLADILTKPLLSPTFLHLRDKLLTQ ESSV
Subjt:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV

A0A5D3DAS3 Putative mitochondrial protein7.4e-9880.83Show/hide
Query:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
        MSTSLDLYTIAPPFNDPSLY RL+ SLQYLTFT PDIAF VNR SQFMHKPTVIHFS VKRIL+YL                          GDTSDRRS
Subjt:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS

Query:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
        TS FIAFLGSN ISWSSKKQSTVSRSST+AEY SLA TT DLYWIRQLLCDLHVPLKTSPTLWCDNVS I LAHN VFHARTKHIEIDYHFVR+KVLRKD
Subjt:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD

Query:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
        ISIRYI SNNQLADILTKPLLSPTFLHLRDKLLTQ ESSV
Subjt:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV

A0A5D3DR35 Putative mitochondrial protein8.5e-11087.08Show/hide
Query:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS
        MSTSLDLYTIAPPFNDPSLYHRL+GSLQYLTFT PDIAFFVNRASQFMHKPTVIHFSTVKRILRYLC                         GDTSDRRS
Subjt:  MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRS

Query:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
        TSSFIAFLGSNPISWSSKKQSTVS SSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVR+KV+RKD
Subjt:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD

Query:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
        ISI YIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV
Subjt:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKLLTQLESSV

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.5e-3440.47Show/hide
Query:  LIGSLQYLTF-TSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLF---SLQTFCDFDWAGDTSDRRSTSSFI-AFLGSNPISWSS
        LIG L Y+   T PD+   VN  S++  K     +  +KR+LRYL GT    + F+K L     +  + D DWAG   DR+ST+ ++      N I W++
Subjt:  LIGSLQYLTF-TSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLF---SLQTFCDFDWAGDTSDRRSTSSFI-AFLGSNPISWSS

Query:  KKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKDISIRYIFSNNQLADILT
        K+Q++V+ SSTEAEY +L     +  W++ LL  +++ L+    ++ DN   IS+A+NP  H R KHI+I YHF R++V    I + YI + NQLADI T
Subjt:  KKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKDISIRYIFSNNQLADILT

Query:  KPLLSPTFLHLRDKL
        KPL +  F+ LRDKL
Subjt:  KPLLSPTFLHLRDKL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-2938Show/hide
Query:  YHRLIGSLQY-LTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNPISWSSK
        Y   +GSL Y +  T PDIA  V   S+F+  P   H+  VK ILRYL GT    + F      L+ + D D AGD  +R+S++ ++       ISW SK
Subjt:  YHRLIGSLQY-LTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNPISWSSK

Query:  KQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKDISIRYIFSNNQLADILTK
         Q  V+ S+TEAEY +   T  ++ W+++ L +L +  K    ++CD+ SAI L+ N ++HARTKHI++ YH++R+ V  + + +  I +N   AD+LTK
Subjt:  KQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKDISIRYIFSNNQLADILTK

P92519 Uncharacterized mitochondrial protein AtMg008101.4e-3253.79Show/hide
Query:  FNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRK-VLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNP
        + DPS +  ++G+LQYLT T PDI++ VN   Q MH+PT+  F  +KR+LRY+ GT  HG+   K    ++Q FCD DWAG TS RRST+ F  FLG N 
Subjt:  FNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRK-VLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNP

Query:  ISWSSKKQSTVSRSSTEAEYCSLATTTVDLYW
        ISWS+K+Q TVSRSSTE EY +LA T  +L W
Subjt:  ISWSSKKQSTVSRSSTEAEYCSLATTTVDLYW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.5e-5850.86Show/hide
Query:  STSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRK-VLFSLQTFCDFDWAGDTSDRRS
        S  L LY+      DP+ Y  ++GSLQYL FT PDI++ VNR SQFMH PT  H   +KRILRYL GTP HGI  +K    SL  + D DWAGD  D  S
Subjt:  STSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRK-VLFSLQTFCDFDWAGDTSDRRS

Query:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD
        T+ +I +LG +PISWSSKKQ  V RSSTEAEY S+A T+ ++ WI  LL +L + L   P ++CDNV A  L  NPVFH+R KHI IDYHF+R +V    
Subjt:  TSSFIAFLGSNPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKD

Query:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKL
        + + ++ +++QLAD LTKPL    F +   K+
Subjt:  ISIRYIFSNNQLADILTKPLLSPTFLHLRDKL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.6e-5751.38Show/hide
Query:  DPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRK-VLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNPIS
        DP+ Y  ++GSLQYL FT PD+++ VNR SQ+MH PT  H++ +KR+LRYL GTP HGI  +K    SL  + D DWAGDT D  ST+ +I +LG +PIS
Subjt:  DPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRK-VLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNPIS

Query:  WSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKDISIRYIFSNNQLAD
        WSSKKQ  V RSSTEAEY S+A T+ +L WI  LL +L + L   P ++CDNV A  L  NPVFH+R KHI +DYHF+R +V    + + ++ +++QLAD
Subjt:  WSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKDISIRYIFSNNQLAD

Query:  ILTKPLLSPTFLHLRDKL
         LTKPL    F +   K+
Subjt:  ILTKPLLSPTFLHLRDKL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 89.4e-3740.64Show/hide
Query:  FNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKF-RKVLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNP
        F D   Y RLIG L YL  T  DI+F VN+ SQF   P + H   V +IL Y+ GT   G+ +  +    LQ F D  +      RRST+ +  FLG++ 
Subjt:  FNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKF-RKVLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNP

Query:  ISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKDISIRYIFSNNQL
        ISW SKKQ  VS+SS EAEY +L+  T ++ W+ Q   +L +PL     L+CDN +AI +A N VFH RTKHIE D H VR++ + +  ++ Y F     
Subjt:  ISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKDISIRYIFSNNQL

Query:  ADILTK---PLLSPTFLHL
         D  T+   P+L  T +++
Subjt:  ADILTK---PLLSPTFLHL

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.6e-0735.8Show/hide
Query:  YLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVL-FSLQTFCDFDWAGDTSDRRSTSSFIAFL
        YLT T PD+ F VNR SQF           V ++L Y+ GT   G+ +       L+ F D DWA     RRS + F + +
Subjt:  YLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVL-FSLQTFCDFDWAGDTSDRRSTSSFIAFL

ATMG00810.1 DNA/RNA polymerases superfamily protein9.8e-3453.79Show/hide
Query:  FNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRK-VLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNP
        + DPS +  ++G+LQYLT T PDI++ VN   Q MH+PT+  F  +KR+LRY+ GT  HG+   K    ++Q FCD DWAG TS RRST+ F  FLG N 
Subjt:  FNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRK-VLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGSNP

Query:  ISWSSKKQSTVSRSSTEAEYCSLATTTVDLYW
        ISWS+K+Q TVSRSSTE EY +LA T  +L W
Subjt:  ISWSSKKQSTVSRSSTEAEYCSLATTTVDLYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTCTATCACAGACTAATTGGTTCCTTGCAATATCTTACCTTCACTAGTCCTGATAT
TGCATTCTTCGTAAATCGTGCCAGTCAGTTCATGCATAAACCAACTGTCATTCACTTTTCAACTGTCAAACGCATCCTCAGATATCTTTGTGGTACTCCAATCCATGGAA
TAAAATTTCGAAAAGTTTTGTTCTCTCTACAAACCTTTTGTGATTTTGATTGGGCAGGTGATACATCTGATCGACGTTCCACCTCCAGCTTCATCGCCTTCCTCGGTTCT
AATCCAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTCGTTCCTCCACAGAAGCAGAATATTGTTCCCTTGCCACTACTACTGTCGATCTTTACTGGATCCGACA
GCTTCTATGTGATCTTCATGTTCCCCTTAAGACATCACCAACATTATGGTGTGATAATGTTTCCGCTATATCTCTGGCTCATAATCCAGTTTTTCATGCTCGCACCAAAC
ACATTGAAATTGATTACCACTTTGTTCGGAAAAAAGTTCTTCGCAAAGACATCTCCATCCGTTACATCTTTTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTT
CTATCTCCTACATTCCTTCACCTTCGAGACAAACTATTGACTCAACTTGAGTCATCCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTCTATCACAGACTAATTGGTTCCTTGCAATATCTTACCTTCACTAGTCCTGATAT
TGCATTCTTCGTAAATCGTGCCAGTCAGTTCATGCATAAACCAACTGTCATTCACTTTTCAACTGTCAAACGCATCCTCAGATATCTTTGTGGTACTCCAATCCATGGAA
TAAAATTTCGAAAAGTTTTGTTCTCTCTACAAACCTTTTGTGATTTTGATTGGGCAGGTGATACATCTGATCGACGTTCCACCTCCAGCTTCATCGCCTTCCTCGGTTCT
AATCCAATATCTTGGTCTTCTAAAAAGCAATCTACCGTCTCTCGTTCCTCCACAGAAGCAGAATATTGTTCCCTTGCCACTACTACTGTCGATCTTTACTGGATCCGACA
GCTTCTATGTGATCTTCATGTTCCCCTTAAGACATCACCAACATTATGGTGTGATAATGTTTCCGCTATATCTCTGGCTCATAATCCAGTTTTTCATGCTCGCACCAAAC
ACATTGAAATTGATTACCACTTTGTTCGGAAAAAAGTTCTTCGCAAAGACATCTCCATCCGTTACATCTTTTCCAACAACCAACTTGCTGATATTCTCACAAAGCCACTT
CTATCTCCTACATTCCTTCACCTTCGAGACAAACTATTGACTCAACTTGAGTCATCCGTTTGA
Protein sequenceShow/hide protein sequence
MSTSLDLYTIAPPFNDPSLYHRLIGSLQYLTFTSPDIAFFVNRASQFMHKPTVIHFSTVKRILRYLCGTPIHGIKFRKVLFSLQTFCDFDWAGDTSDRRSTSSFIAFLGS
NPISWSSKKQSTVSRSSTEAEYCSLATTTVDLYWIRQLLCDLHVPLKTSPTLWCDNVSAISLAHNPVFHARTKHIEIDYHFVRKKVLRKDISIRYIFSNNQLADILTKPL
LSPTFLHLRDKLLTQLESSV