CuGenDBv2

Gene ID	Cmc01g0028081
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ATP synthase subunit alpha, chloroplastic
Genome location	CMiso1.1chr01:29405168..29405467
RNA-Seq Expression	Cmc01g0028081
Synteny	Cmc01g0028081
Gene Ontology terms	GO:1902600 - proton transmembrane transport (biological process) GO:0006351 - transcription, DNA-templated (biological process) GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0000428 - DNA-directed RNA polymerase complex (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0043531 - ADP binding (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR027417 - P-loop containing nucleoside triphosphate hydrolase IPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

AEX93557.1 ATP synthase alpha chain [Xeronema callistemon]

4.3e-30

76.53

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS++LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFNA I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

PHT75448.1 ATP synthase subunit alpha, chloroplastic [Capsicum annuum]

4.3e-30

76.53

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS +LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFN+ IG  INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

QKY62625.1 ATP synthase CF1 alpha subunit [Acer micranthum]

2.5e-30

77.55

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLSY LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFNA I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

YP_009241901.1 ATP synthase CF1 alpha subunit [Sagittaria lichuanensis]

1.9e-30

77.55

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS+ALGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFNA I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

YP_010019719.1 ATP synthase CF1 alpha subunit [Primula merrilliana]

3.3e-30

76.53

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLSY+LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFN+ I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

TrEMBL top hits

e value

%identity

Alignment

A0A142CRV0 ATP synthase subunit alpha

9.4e-31

77.55

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS+ALGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFNA I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

A0A2G2Z0C3 ATP synthase subunit alpha, mitochondrial

2.1e-30

76.53

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS +LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFN+ IG  INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

A0A3B5ZUZ3 ATP synthase subunit alpha

3.2e-31

78.57

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYPRD+FYLHSRLLERAAKL+  LGEGSMTTLP+VE+QSGDVS YIPTNVISITD QIFL  DLFNA I S INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

A0A7L9D9Y8 ATP synthase subunit alpha

1.6e-30

76.53

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLSY+LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFN+ I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

H2F4H4 ATP synthase subunit alpha, chloroplastic

2.1e-30

76.53

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS++LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFNA I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

SwissProt top hits

e value

%identity

Alignment

A4QJA0 ATP synthase subunit alpha, chloroplastic

3.7e-32

76.53

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS  LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFNA I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

A4QJI4 ATP synthase subunit alpha, chloroplastic

3.7e-32

76.53

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS  LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFNA I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

A4QK03 ATP synthase subunit alpha, chloroplastic

3.7e-32

76.53

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS  LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFNA I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

A7M951 ATP synthase subunit alpha, plastid

1.3e-32

77.55

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS  LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL VDLFNA I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

Q2QDA3 ATP synthase subunit alpha, chloroplastic

9.7e-33

77.55

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS ALGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFNA I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

8.1e-27

64.29

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+A+P D+FYLHSRLLERAAK S   G GS+T LP++E+Q+GDVS YIPTNVISITD QI L  +LF   I   INVG+ VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

ATCG00120.1 ATP synthase subunit alpha

2.6e-33

76.53

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+AYP D+FYLHSRLLERAAKLS  LGEGSMT LP+VE+QSGDVS YIPTNVISITD QIFL  DLFNA I   INVGI VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

ATMG01190.1 ATP synthase subunit 1

8.1e-27

64.29

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Query:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS
        MSLLL+R  GR+A+P D+FYLHSRLLERAAK S   G GS+T LP++E+Q+GDVS YIPTNVISITD QI L  +LF   I   INVG+ VSR GS +
Subjt:  MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGS

Sequences

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CDS sequence

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ATGTCTCTTCTTTTACAAAGATCGTTGGGCCGCAAAGCTTATCCAAGAGATATTTTTTATTTGCATTCACGCCTTTTAGAAAGAGCCGCTAAATTAAGTTATGCTTTAGG
TGAAGGAAGTATGACTACTTTACCAATGGTTGAGTCCCAATCGGGAGATGTTTCAACTTATATTCCTACTAATGTAATTTCCATTACCGATAGACAAATATTCTTATATG
TTGATCTATTCAATGCTGAAATCGGATCTACTATTAATGTGGGTATTTTCGTCTCCAGAGAAGGATCTGGCTCAAATTAA

mRNA sequence

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Protein sequence

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MSLLLQRSLGRKAYPRDIFYLHSRLLERAAKLSYALGEGSMTTLPMVESQSGDVSTYIPTNVISITDRQIFLYVDLFNAEIGSTINVGIFVSREGSGSN

Cmc01g0028081 (gene) of Melon (Charmono) v1.1 genome