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Cmc01g0028351 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0028351
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionHistidine kinase
Genome locationCMiso1.1chr01:29642053..29648820
RNA-Seq ExpressionCmc01g0028351
SyntenyCmc01g0028351
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2620186.1 histidine kinase 4 [Pyrus ussuriensis x Pyrus communis]1.1e-0679.49Show/hide
Query:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH
        LT S ++ DNKVRR EVLGSMCDQRARMLQDQ SV VNH
Subjt:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH

KAB2624129.1 histidine kinase 4 [Pyrus ussuriensis x Pyrus communis]1.1e-0679.49Show/hide
Query:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH
        LT S ++ DNKVRR EVLGSMCDQRARMLQDQ SV VNH
Subjt:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH

NP_001315778.1 histidine kinase 4-like [Malus domestica]1.1e-0679.49Show/hide
Query:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH
        LT S ++ DNKVRR EVLGSMCDQRARMLQDQ SV VNH
Subjt:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH

TQD89588.1 hypothetical protein C1H46_024834 [Malus baccata]1.1e-0679.49Show/hide
Query:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH
        LT S ++ DNKVRR EVLGSMCDQRARMLQDQ SV VNH
Subjt:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH

XP_009351580.1 PREDICTED: histidine kinase 4 [Pyrus x bretschneideri]1.1e-0679.49Show/hide
Query:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH
        LT S ++ DNKVRR EVLGSMCDQRARMLQDQ SV VNH
Subjt:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH

TrEMBL top hitse value%identityAlignment
A0A097IC86 Histidine kinase5.3e-0779.49Show/hide
Query:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH
        LT S ++ DNKVRR EVLGSMCDQRARMLQDQ SV VNH
Subjt:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH

A0A2I4G1Y1 Histidine kinase6.9e-0783.33Show/hide
Query:  SILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH
        S ++ DNKVRRKEVLGSMCDQRARMLQDQ SV VNH
Subjt:  SILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH

A0A540LT52 Histidine kinase5.3e-0779.49Show/hide
Query:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH
        LT S ++ DNKVRR EVLGSMCDQRARMLQDQ SV VNH
Subjt:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH

A0A5N5GX38 Histidine kinase5.3e-0779.49Show/hide
Query:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH
        LT S ++ DNKVRR EVLGSMCDQRARMLQDQ SV VNH
Subjt:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH

A0A5N5H801 Histidine kinase5.3e-0779.49Show/hide
Query:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH
        LT S ++ DNKVRR EVLGSMCDQRARMLQDQ SV VNH
Subjt:  LTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH

SwissProt top hitse value%identityAlignment
A1A696 Probable histidine kinase 36.9e-0442.11Show/hide
Query:  LNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH---ALLWPFSFPLSTTPKMSQQM
        +N  +  +R++ L SMCD+RARMLQDQ +V +NH     +   +F  S TP    QM
Subjt:  LNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH---ALLWPFSFPLSTTPKMSQQM

A2WYI4 Probable histidine kinase 36.9e-0442.11Show/hide
Query:  LNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH---ALLWPFSFPLSTTPKMSQQM
        +N  +  +R++ L SMCD+RARMLQDQ +V +NH     +   +F  S TP    QM
Subjt:  LNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNH---ALLWPFSFPLSTTPKMSQQM

Q9C5U0 Histidine kinase 41.1e-0683.33Show/hide
Query:  NKVRRKEVLGSMCDQRARMLQDQISVIVNH
        NK+RR+EVL SMCDQRARMLQDQ SV VNH
Subjt:  NKVRRKEVLGSMCDQRARMLQDQISVIVNH

Q9C5U1 Histidine kinase 35.2e-0470.37Show/hide
Query:  RRKEVLGSMCDQRARMLQDQISVIVNH
        +RKE L SMCD+RARMLQDQ +V +NH
Subjt:  RRKEVLGSMCDQRARMLQDQISVIVNH

Arabidopsis top hitse value%identityAlignment
AT1G27320.1 histidine kinase 33.7e-0570.37Show/hide
Query:  RRKEVLGSMCDQRARMLQDQISVIVNH
        +RKE L SMCD+RARMLQDQ +V +NH
Subjt:  RRKEVLGSMCDQRARMLQDQISVIVNH

AT2G01830.1 CHASE domain containing histidine kinase protein8.0e-0883.33Show/hide
Query:  NKVRRKEVLGSMCDQRARMLQDQISVIVNH
        NK+RR+EVL SMCDQRARMLQDQ SV VNH
Subjt:  NKVRRKEVLGSMCDQRARMLQDQISVIVNH

AT2G01830.2 CHASE domain containing histidine kinase protein8.0e-0883.33Show/hide
Query:  NKVRRKEVLGSMCDQRARMLQDQISVIVNH
        NK+RR+EVL SMCDQRARMLQDQ SV VNH
Subjt:  NKVRRKEVLGSMCDQRARMLQDQISVIVNH

AT2G01830.3 CHASE domain containing histidine kinase protein8.0e-0883.33Show/hide
Query:  NKVRRKEVLGSMCDQRARMLQDQISVIVNH
        NK+RR+EVL SMCDQRARMLQDQ SV VNH
Subjt:  NKVRRKEVLGSMCDQRARMLQDQISVIVNH

AT5G35750.1 histidine kinase 24.1e-0457.14Show/hide
Query:  VRRKEVLGSMCDQRARMLQDQISVIVNH
        ++R+E L +MCD+RAR+LQDQ +V +NH
Subjt:  VRRKEVLGSMCDQRARMLQDQISVIVNH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGACGCTCTTACAGCTTCAATCCTTAATTTAGATAACAAAGTTAGAAGAAAGGAAGTTCTGGGGAGTATGTGTGACCAGAGGGCTAGGATGCTTCAGGATCAAAT
TAGTGTCATTGTCAACCATGCCTTGCTTTGGCCATTCTCATTTCCACTCTCCACTACTCCAAAAATGTCTCAGCAAATGAACAGAAATTACCTTGATGTCTCAATTTAA
mRNA sequenceShow/hide mRNA sequence
TCCTTTTCAAAGCCCCTCCACTTCTCCAACTTCATCGAATCCCTTCATTTCTTCAATCTGAACATAAATTTTGTCTTCCTATCGCCTTGGATTTCCATACTTTGTCAAGG
GGAGAGCTCCAAGTCCTTTGTAAGACGAGTAAGATTCCGGCTAATATCACCAATGTCGCCATGACCGACGCTCTTACAGCTTCAATCCTTAATTTAGATAACAAAGTTAG
AAGAAAGGAAGTTCTGGGGAGTATGTGTGACCAGAGGGCTAGGATGCTTCAGGATCAAATTAGTGTCATTGTCAACCATGCCTTGCTTTGGCCATTCTCATTTCCACTCT
CCACTACTCCAAAAATGTCTCAGCAAATGAACAGAAATTACCTTGATGTCTCAATTTAAGAGAGGCCGTGAAGTTTTCTTCTTCGTATTGCTTAAAAATGCTCGCCGTGC
TCAAAATCGTTGGATGGTGCTTGAAAACCCATTAAAGTGTTTTTTCTTCTTCATGACAAGAATCTGGAAGGTAGCTGCAGCACAACATGCTAATTTAGATGTGAAATGTT
TCTTTGAAGATAAAAAGTAAATGAAGCTTCCAAAGATGATGGATGGAGATTTCTACTGAGAAAATATATAAAAATTTGTCGTTGTAAAAGACTTCACCAGCTTTCCCTCT
CAGTTACCGTCAGTTTAGAGCTCTTTCATTCCCTATTCCTAAATCCAGTGGAAAGGAATATAGATTGAAACCATTGAGCGATGCCTTTCATGAGCAGGGAACCTTCCTGC
TTGGACCAGGATTTCGAGTTTCAAGCGCAAGGCGATTCTAGTCTTGTACAGATTCCAGGATAGATGAAGCGTTGATCGGCAGTTGACCGCAACGGTAATATTTGGATATA
AAAAGCCATAAAAGGGGGTAAGTCTTCGCTTGTGCTTCTGTTATGAGGGTTTTCATTATTTTTTTCCTCTCAATTCAACATCACCAGGTTAGTCAATATTTTTCTCCTCT
TCAATTAATTATAATAGATATCTTATCGTGGTCTCTGCTTTAGTTATTTTAATCTTTGTCGTTATGATTTCATATCAACATCCTTTCCAACTCTTTTTCTCTGATTAATT
TTTTACTTTTTCTTCTTCTTTGATTAATTAGGGTTGGGAGTTGGAACCAAATTATGCTGAACAAATTAAGCAAACACGACCATGGGGATATTCAACCTAACCAGCTTTCC
CTCAG
Protein sequenceShow/hide protein sequence
MTDALTASILNLDNKVRRKEVLGSMCDQRARMLQDQISVIVNHALLWPFSFPLSTTPKMSQQMNRNYLDVSI