; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0028741 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0028741
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRNA-binding protein BRN1
Genome locationCMiso1.1chr01:29981322..29986015
RNA-Seq ExpressionCmc01g0028741
SyntenyCmc01g0028741
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR002343 - Paraneoplastic encephalomyelitis antigen
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057544.1 RNA-binding protein BRN1 [Cucumis melo var. makuwa]8.9e-24596.05Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG-----------------CCFVICPSRQEADKAVNAC
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG                 CCFVICPSRQEADKAVNAC
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG-----------------CCFVICPSRQEADKAVNAC

Query:  HNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP
        HNKKTLPGASSPLQVKYADGELERL EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP
Subjt:  HNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP

Query:  LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM
        LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM
Subjt:  LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM

Query:  ATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSA
        ATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSA
Subjt:  ATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSA

Query:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

TYK18266.1 RNA-binding protein BRN1 [Cucumis melo var. makuwa]2.6e-24492.99Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR---------------------------------GCCF
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR                                 GCCF
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR---------------------------------GCCF

Query:  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL
        VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL
Subjt:  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL

Query:  EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ
        EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ
Subjt:  EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ

Query:  GNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDR
        GNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDR
Subjt:  GNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDR

Query:  ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

XP_004148884.1 RNA-binding protein BRN1 [Cucumis sativus]1.0e-24899.77Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV
        KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV

Query:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
        PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
Subjt:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        YDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

XP_008451423.1 PREDICTED: RNA-binding protein BRN1 [Cucumis melo]2.0e-249100Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV
        KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV

Query:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
        PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
Subjt:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

XP_038900154.1 RNA-binding protein BRN1 [Benincasa hispida]4.9e-23596.15Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSR GERKE SNQEEEDSVKLFVGQVPK MTE QLL MFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP
        KAQSQA+NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSG+PNMIPQLNQGNAMRGIPPDLGPGMATRNY MPPA+Y  SAYP
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP

Query:  GVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGK-NSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFG
        GVP LQHPMAY GGMMSPGVVSSSPGPGPFTGGK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCFG
Subjt:  GVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGK-NSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFG

Query:  FVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        FVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  FVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

TrEMBL top hitse value%identityAlignment
A0A0A0K5R5 Uncharacterized protein4.9e-24999.77Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV
        KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV

Query:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
        PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
Subjt:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        YDSAEAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

A0A1S3BRF9 RNA-binding protein BRN19.9e-250100Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV
        KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGV

Query:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
        PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
Subjt:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

A0A5A7UR22 RNA-binding protein BRN14.3e-24596.05Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG-----------------CCFVICPSRQEADKAVNAC
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG                 CCFVICPSRQEADKAVNAC
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRG-----------------CCFVICPSRQEADKAVNAC

Query:  HNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP
        HNKKTLPGASSPLQVKYADGELERL EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP
Subjt:  HNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP

Query:  LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM
        LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM
Subjt:  LVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM

Query:  ATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSA
        ATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSA
Subjt:  ATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSA

Query:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  KVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

A0A5D3D400 RNA-binding protein BRN11.3e-24492.99Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR---------------------------------GCCF
        MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR                                 GCCF
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASR---------------------------------GCCF

Query:  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL
        VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL
Subjt:  VICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAAL

Query:  EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ
        EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ
Subjt:  EAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQ

Query:  GNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDR
        GNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDR
Subjt:  GNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDR

Query:  ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

A0A6J1GP82 RNA-binding protein BRN1-like1.3e-22893.88Show/hide
Query:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGS GGERK SS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKY
Subjt:  MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP
        KAQSQA+NVLNADSQ  SLFGA+PLGY+PPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNY MPPASY  SAYP
Subjt:  KAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP

Query:  GVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG-KNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFG
         VP LQHPMAYPGGMMSPGVVSSS  PGPFTGG  NSPTSS+GKGSG QIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCFG
Subjt:  GVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG-KNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFG

Query:  FVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        FVSYDS EAAQSAIS MNGCQLGGKKLKVQLKRDNKQSKPY
Subjt:  FVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

SwissProt top hitse value%identityAlignment
A0JM51 CUGBP Elav-like family member 55.2e-7036.4Show/hide
Query:  KESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEH
        ++S + ++ D++KLFVGQ+P+++ E  L  +F++F  + E+ +++D+ T   +GC F+   +R  A KA  A H +KTLPG + P+QVK AD E    + 
Subjt:  KESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEH

Query:  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK------------
        KLF+GML K  SE+EV+ +F  +G+I++  +LRG   +SKGCAF+K+ +  +A AA++A++G   M G+S  LVVK+ADT+KER  R+            
Subjt:  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK------------

Query:  -------------AQKAQSQATNVLNADS---QHPSL-FGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPG
                     AQ    Q T VL+        PS+ F +  +  +   N  G  A         H PP+   +  P ++  L  G       P   P 
Subjt:  -------------AQKAQSQATNVLNADS---QHPSL-FGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPG

Query:  MAT--RNYAMPPASYSAYPGVPAL--------QHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELAN
        + T   N  +P  + S    V +L        Q+   YP   ++P V  S+P P P                  Q EGP G NLFIYH+PQEFGD EL  
Subjt:  MAT--RNYAMPPASYSAYPGVPAL--------QHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELAN

Query:  SFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
         F  FG ++S+KVF+D+ +  SKCFGFVS+D+  +AQ+AI  MNG Q+G K+LKVQLKR    ++PY
Subjt:  SFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

Q6P0B1 CUGBP Elav-like family member 24.8e-6836.44Show/hide
Query:  ESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL-
        E S+Q + D++K+FVGQ+P+  +E +L  +F+ +  V ++NI+RD++     S+GCCFV   +R+ A +A NA HN KTL G   P+Q+K AD E     
Subjt:  ESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL-

Query:  -EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQAT
         + KLFIGM+ K  +E+++  +FS YG I++ +ILRG    S+GCAF+ + T+  A  A++A++    MEG S P+VVK+ADT+K+++ R+ Q+  +Q  
Subjt:  -EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQAT

Query:  NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQY---------HLPPMQN------------QSGFPNMIPQLNQGNAMRGIPPDLGPGMATRN
          LN+ S   SL G    G  P Y     QA  S  L  +         +   +QN             S  P+    L       G         A  +
Subjt:  NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQY---------HLPPMQN------------QSGFPNMIPQLNQGNAMRGIPPDLGPGMATRN

Query:  YAMPP-ASYSAYPGVP--------------ALQHPMAYPGGMMSPGVVSSSPGP-----GPFTGGKNSPTSSM-----------GKGSGGQIEGPPGANL
         AM    S     G+               ++    A  GG+ S G+ + S GP       ++G +    +++              +G Q EGP GANL
Subjt:  YAMPP-ASYSAYPGVP--------------ALQHPMAYPGGMMSPGVVSSSPGP-----GPFTGGKNSPTSSM-----------GKGSGGQIEGPPGANL

Query:  FIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
        FIYH+PQEFGD+++   F  FG V+SAKVF+DK + +SKCFGFVSYD+  +AQ+AI  MNG Q+G K+LKVQLKR    SKPY
Subjt:  FIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

Q8GZ26 RNA-binding protein BRN21.1e-14463.47Show/hide
Query:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM
        E E+ VKLFVGQVPKHMTE QLLT+F+EF++V+EVNII++KTTRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERLEHKLF+GM
Subjt:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM

Query:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQH
        LPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+  K QS   +V   D Q+
Subjt:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQH

Query:  PSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAY
        PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y    G   LQ+PMA+
Subjt:  PSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAY

Query:  PGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQS
        P GM+ P +  ++  PG    G + P+S        Q EGP GANLFIY+IP+EF D+ELA +F+ FG+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+
Subjt:  PGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQS

Query:  AISMMNGCQLGGKKLKVQLKRDNKQSK
        AI+ MNGCQL GKKLKVQLKRDN Q +
Subjt:  AISMMNGCQLGGKKLKVQLKRDNKQSK

Q8LFS6 RNA-binding protein BRN17.0e-16068.88Show/hide
Query:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE
        E KE + +  EEE+SVKLFVGQ+PKHM+E QLLT+FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYADGELE
Subjt:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE

Query:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA
        RLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWADTE+ER  R+ QKAQS  
Subjt:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA

Query:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYAMPPASY--SAYPGV
          + N D  +PSLFGA+P+GYVPPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y  S YP +
Subjt:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYAMPPASY--SAYPGV

Query:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
             P AYP G++SP  +SSS  PG  + G ++P   +G  S  Q EGP GANLFIY+IP+EFGD+ELA +F++FG VLSAKVFVDK +GVSKCFGFVS
Subjt:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKP
        YDS  AAQ+AI MMNG  LGGKKLKVQLKRD+   +P
Subjt:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKP

Q9IBD0 CUGBP Elav-like family member 13.7e-6835.54Show/hide
Query:  NQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EH
        +Q + DS+K+FVGQ+P+  +E QL  +F+ +  V E+N++RD++     S+GCCFV   +R+ A +A NA HN K LPG   P+Q+K AD E      + 
Subjt:  NQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR--ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--EH

Query:  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVL
        KLF+GM+ K  +E+++  +FS YG I++ +ILRG    S+GCAF+ +  +  A +A+++++    MEG S P+VVK+ADT+K+++ ++  +   Q    L
Subjt:  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVL

Query:  NADSQHPSLFGAMPLG--YVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVPALQ----
        NA S   +L G   LG  Y+  Y     Q   S G    +L PM   +   N+       +A +  P     G +    +  P S     G P+ Q    
Subjt:  NADSQHPSLFGAMPLG--YVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVPALQ----

Query:  -------------------HPMAYPGGMMSPGV-------VSSSPGPGPFTGGKNSPTSSMGKGS-----------------------------------
                           +PMA  G + S          +SS        GG  S   S G GS                                   
Subjt:  -------------------HPMAYPGGMMSPGV-------VSSSPGPGPFTGGKNSPTSSMGKGS-----------------------------------

Query:  ---GGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY
           G Q EGP GANLFIYH+PQEFGD++L   F  FG V+SAKVF+DK + +SKCFGFVSYD+  ++Q+AI  MNG Q+G K+LKVQLKR    SKPY
Subjt:  ---GGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY

Arabidopsis top hitse value%identityAlignment
AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.7e-14663.47Show/hide
Query:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM
        E E+ VKLFVGQVPKHMTE QLLT+F+EF++V+EVNII++KTTRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERLEHKLF+GM
Subjt:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM

Query:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQH
        LPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+  K QS   +V   D Q+
Subjt:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQH

Query:  PSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAY
        PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y    G   LQ+PMA+
Subjt:  PSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAY

Query:  PGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQS
        P GM+ P +  ++  PG    G + P+S        Q EGP GANLFIY+IP+EF D+ELA +F+ FG+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+
Subjt:  PGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQS

Query:  AISMMNGCQLGGKKLKVQLKRDNKQSK
        AI+ MNGCQL GKKLKVQLKRDN Q +
Subjt:  AISMMNGCQLGGKKLKVQLKRDNKQSK

AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-14362.16Show/hide
Query:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--------
        E E+ VKLFVGQVPKHMTE QLLT+F+EF++V+EVNII++KTTRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERL        
Subjt:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL--------

Query:  -EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQAT
         EHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+  K QS   
Subjt:  -EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQAT

Query:  NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYAMPPASYSAYPGV
        +V   D Q+PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y    G 
Subjt:  NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYAMPPASYSAYPGV

Query:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
          LQ+PMA+P GM+ P +  ++  PG    G + P+S        Q EGP GANLFIY+IP+EF D+ELA +F+ FG+VLSAKVFVDK +G+SKCFGF+S
Subjt:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSK
        YDS  AAQ+AI+ MNGCQL GKKLKVQLKRDN Q +
Subjt:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSK

AT4G03110.1 RNA-binding protein-defense related 15.0e-16168.88Show/hide
Query:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE
        E KE + +  EEE+SVKLFVGQ+PKHM+E QLLT+FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYADGELE
Subjt:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE

Query:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA
        RLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWADTE+ER  R+ QKAQS  
Subjt:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA

Query:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYAMPPASY--SAYPGV
          + N D  +PSLFGA+P+GYVPPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y  S YP +
Subjt:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYAMPPASY--SAYPGV

Query:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS
             P AYP G++SP  +SSS  PG  + G ++P   +G  S  Q EGP GANLFIY+IP+EFGD+ELA +F++FG VLSAKVFVDK +GVSKCFGFVS
Subjt:  PALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVS

Query:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKP
        YDS  AAQ+AI MMNG  LGGKKLKVQLKRD+   +P
Subjt:  YDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKP

AT4G03110.2 RNA-binding protein-defense related 12.4e-14768.08Show/hide
Query:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE
        E KE + +  EEE+SVKLFVGQ+PKHM+E QLLT+FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYADGELE
Subjt:  ERKESSNQ--EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELE

Query:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA
        RLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWADTE+ER  R+ QKAQS  
Subjt:  RLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA

Query:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYAMPPASY--SAYPGVP
          + N D  +PSLFGA+P+GYVPPYNGYGY  PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y  S YP + 
Subjt:  TNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYAMPPASY--SAYPGVP

Query:  ALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSY
            P AYP G++SP  +SSS  PG  + G ++P   +G  S  Q EGP GANLFIY+IP+EFGD+ELA +F++FG VLSAKVFVDK +GVSKCFG +S+
Subjt:  ALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSY

Query:  D
        D
Subjt:  D

AT4G16280.2 RNA binding;abscisic acid binding6.3e-3934.75Show/hide
Query:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLF
        +   +VKLFVG VP+  TE ++   F++   V EV +I+DK T   +GCCFV   + ++AD+A+ A HN+ TLPG + P+QV+YADGE ER   LE KLF
Subjt:  EEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLF

Query:  IGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNAD
        +G L K  +E EV  +F Q+G ++D+ ++R   + S+GC F+KY +K+ A+AA++ +NG   M G + PL+V++A+ ++ +     + A           
Subjt:  IGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNAD

Query:  SQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQ---YHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLG--PGMAT--RNYAMPPASYSAYPGVPALQHP
                 + LG  P +   G +   ++G       H  P +  +   N+ P  N G  +RG   D    PG AT   N   P   Y    GVP L +P
Subjt:  SQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQ---YHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLG--PGMAT--RNYAMPPASYSAYPGVPALQHP

Query:  MAYPG
        +  PG
Subjt:  MAYPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGGGAGTAGAGGAGGAGAGAGAAAGGAGAGTAGTAATCAGGAGGAAGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTTCCAAAGCATATGACCGAACCTCA
ACTTCTCACAATGTTCCAAGAGTTTGCACTTGTGGATGAAGTCAACATCATCAGAGACAAAACCACTCGCGCCTCTAGAGGTTGCTGTTTCGTGATTTGTCCTTCGAGGC
AAGAGGCGGATAAGGCGGTCAATGCTTGCCATAACAAGAAAACTTTGCCTGGGGCTTCTAGTCCGTTGCAAGTTAAATATGCAGATGGCGAGCTGGAAAGACTAGAACAC
AAACTCTTTATTGGAATGCTTCCGAAAAATGTATCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAGTATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCACAGCA
GACAAGTAAAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAACGGAAAGTGTAAAATGGAGGGATCCAGTGTCCCTTTGG
TTGTTAAATGGGCCGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCACTAATGTGCTTAATGCAGACTCCCAGCATCCTTCACTGTTT
GGAGCCATGCCACTGGGTTATGTTCCACCATATAACGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATGCAGAATCAATCTGG
TTTTCCCAACATGATACCTCAATTAAACCAAGGTAATGCAATGCGCGGGATCCCGCCTGACCTTGGCCCAGGTATGGCCACTAGAAATTATGCCATGCCTCCTGCAAGTT
ACTCTGCCTATCCTGGAGTTCCAGCTCTTCAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCAGGGGTTGTGAGCAGTTCACCTGGTCCAGGGCCATTCACTGGT
GGCAAGAACTCTCCAACGTCTAGTATGGGTAAAGGGTCTGGCGGTCAGATTGAAGGTCCACCTGGTGCTAATCTTTTTATTTATCACATACCCCAAGAATTTGGAGATCG
GGAGCTTGCTAACTCTTTTAGAGCATTTGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGGTTTGTTAGTTATGATTCTG
CCGAGGCTGCTCAATCTGCAATAAGTATGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGA
mRNA sequenceShow/hide mRNA sequence
AAATAAGCGTCAAAGCGAAGGGCAAAATCAAATACAATTTAATAATTATAACAAAAATTTATTGGAAGAGATCCAATTTTTTGCCATCAAAGAATCCCTCAGTTTTTATT
TTTATATTTTTTCCCAACGAAGACTCTCCCAAGAAAAATCCAATCTCAGAGAGAGAAGTTGACGGCGAAATCTAGAGAGAGAAAGCTTCAAACCGGCATTAATGGCGGAA
GGGAGTAGAGGAGGAGAGAGAAAGGAGAGTAGTAATCAGGAGGAAGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTTCCAAAGCATATGACCGAACCTCAACTTCTCAC
AATGTTCCAAGAGTTTGCACTTGTGGATGAAGTCAACATCATCAGAGACAAAACCACTCGCGCCTCTAGAGGTTGCTGTTTCGTGATTTGTCCTTCGAGGCAAGAGGCGG
ATAAGGCGGTCAATGCTTGCCATAACAAGAAAACTTTGCCTGGGGCTTCTAGTCCGTTGCAAGTTAAATATGCAGATGGCGAGCTGGAAAGACTAGAACACAAACTCTTT
ATTGGAATGCTTCCGAAAAATGTATCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAGTATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCACAGCAGACAAGTAA
AGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAACGGAAAGTGTAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAAT
GGGCCGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCACTAATGTGCTTAATGCAGACTCCCAGCATCCTTCACTGTTTGGAGCCATG
CCACTGGGTTATGTTCCACCATATAACGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATGCAGAATCAATCTGGTTTTCCCAA
CATGATACCTCAATTAAACCAAGGTAATGCAATGCGCGGGATCCCGCCTGACCTTGGCCCAGGTATGGCCACTAGAAATTATGCCATGCCTCCTGCAAGTTACTCTGCCT
ATCCTGGAGTTCCAGCTCTTCAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCAGGGGTTGTGAGCAGTTCACCTGGTCCAGGGCCATTCACTGGTGGCAAGAAC
TCTCCAACGTCTAGTATGGGTAAAGGGTCTGGCGGTCAGATTGAAGGTCCACCTGGTGCTAATCTTTTTATTTATCACATACCCCAAGAATTTGGAGATCGGGAGCTTGC
TAACTCTTTTAGAGCATTTGGCCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGGTTTGTTAGTTATGATTCTGCCGAGGCTG
CTCAATCTGCAATAAGTATGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAGAGTAAACCATATTGATTCGGTGTAACG
TTATCGAAGGCAGCAAATTTGCTACCAATTGCTGACACTGGGGAGCCTAAATACACGACAATCATTCCATTATCAGATATCTTAGGGTGGATTAGGGACTTTCTATGGTT
AAATATTCATTACTCCATCCTGCCTGTGATTGCATCAGATCAAATCAAACATACTTGTAATTCATGGTTCGGCCATGCTGATGCAATTTGTAATTTATGTATTTTGGAAG
ATTAACATTCTTTAATTGATTCTTCCGGGACATCTGTTGATTGTAAAATACCATGTAATTATAAATGATCTCTTGATTCTTTTAGGTTTATTGATTTAGTATTGCCTAAT
TTGATGCGC
Protein sequenceShow/hide protein sequence
MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEH
KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLF
GAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASYSAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTG
GKNSPTSSMGKGSGGQIEGPPGANLFIYHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGCQLGGKKLKVQLKRDNKQSKPY