; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0029651 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0029651
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptioncyclic nucleotide-gated ion channel 1-like isoform X1
Genome locationCMiso1.1chr01:30944118..30949087
RNA-Seq ExpressionCmc01g0029651
SyntenyCmc01g0029651
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0005216 - ion channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK31716.1 cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa]4.1e-1686.96Show/hide
Query:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
        +L S VIGAFWYLFT ERKTTCWEESY NWPLNCNY+GNLSANLSA
Subjt:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
XP_008439340.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo]4.1e-1686.96Show/hide
Query:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
        +L S VIGAFWYLFT ERKTTCWEESY NWPLNCNY+GNLSANLSA
Subjt:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
XP_016899102.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo]4.1e-1686.96Show/hide
Query:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
        +L S VIGAFWYLFT ERKTTCWEESY NWPLNCNY+GNLSANLSA
Subjt:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
XP_016899103.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X3 [Cucumis melo]4.1e-1686.96Show/hide
Query:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
        +L S VIGAFWYLFT ERKTTCWEESY NWPLNCNY+GNLSANLSA
Subjt:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
XP_031738991.1 cyclic nucleotide-gated ion channel 1 isoform X1 [Cucumis sativus]2.7e-1276.74Show/hide
Query:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSAN
        +L S VIGAFWYLFT ERKTTCWEE+Y NW LNCNY+GNLS +
Subjt:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSAN
TrEMBL top hitse value%identityAlignment
A0A1S3AY65 cyclic nucleotide-gated ion channel 1-like isoform X12.0e-1686.96Show/hide
Query:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
        +L S VIGAFWYLFT ERKTTCWEESY NWPLNCNY+GNLSANLSA
Subjt:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
A0A1S4DSX9 cyclic nucleotide-gated ion channel 1-like isoform X22.0e-1686.96Show/hide
Query:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
        +L S VIGAFWYLFT ERKTTCWEESY NWPLNCNY+GNLSANLSA
Subjt:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
A0A1S4DT20 cyclic nucleotide-gated ion channel 1-like isoform X32.0e-1686.96Show/hide
Query:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
        +L S VIGAFWYLFT ERKTTCWEESY NWPLNCNY+GNLSANLSA
Subjt:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
A0A5A7UA05 Cyclic nucleotide-gated ion channel 1-like isoform X12.0e-1686.96Show/hide
Query:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
        +L S VIGAFWYLFT ERKTTCWEESY NWPLNCNY+GNLSANLSA
Subjt:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
A0A5D3E7N4 Cyclic nucleotide-gated ion channel 1-like isoform X12.0e-1686.96Show/hide
Query:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
        +L S VIGAFWYLFT ERKTTCWEESY NWPLNCNY+GNLSANLSA
Subjt:  LLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53130.1 cyclic nucleotide gated channel 12.2e-0457.69Show/hide
Query:  LLQSEVIGAFWYLFTAERKTTCWEES
        +L S V GAFWYLF+ ER+T CW+++
Subjt:  LLQSEVIGAFWYLFTAERKTTCWEES

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAATTGATGTTGCACGAACTTGAAATGATACATGAAAAGGCAACCAACAAGATTGCACTCTTACAAAGTGAGGTTATTGGAGCGTTTTGGTATTTATTC
ACAGCAGAGAGAAAAACAACTTGCTGGGAAGAAAGCTATGCAAATTGGCCTCTAAACTGCAATTACATAGGCAACTTGAGTGCCAATTTGAGTGCCTGA
mRNA sequenceShow/hide mRNA sequence
TGTGCAATTCTTCTTGGGGCTGAGACATTGTGTGATTACATCCAGTAGAAACCGTTTCAACCGTTAGTAGAATATGTGCTGAGGCACAACTTTCATTTGGAGAAA
ACAAACATTTAACGTGAGGTCATGAGTGCACTAAAAGGACTAGAAAAGGGCTCGTTAAAGGGAAGTAGAAGGAAAACCATACATGATGTGTGCAATTCTTCTTGG
GGCTGAGACATTGTGTGGATTACATCCAGTAGAAACCATTTCAACCGTTAGTAGAATATGTGCTGAGAACTGGGTTCAATAAATCTGGTTACAGCTTCGGAAAAG
TCATTGGCATGTAGTTCAACAACAAAGACCTCGGTCAGTCTTCACTTGAACATATTTTGGACAACTTTGATGTGGATAATCGCAATTGTCTCTCTTCCTGGACGA
ATTTTAGCTGCTTTACGAAGGGAAAGGCAGTTGCAACAATATGTGCAATTTTTGGAAATCGTGATAATGTTTTGCTGGAAAGAAAGGAGCTCCAAAAACAATTCC
AGGCTGCTTTGAAGGAGCATAAGATGATGGAATTGATGTTGCACGAACTTGAAATGATACATGAAAAGGCAACCAACAAGATTGCACTCTTACAAAGTGAGGTTA
TTGGAGCGTTTTGGTATTTATTCACAGCAGAGAGAAAAACAACTTGCTGGGAAGAAAGCTATGCAAATTGGCCTCTAAACTGCAATTACATAGGCAACTTGAGTG
CCAATTTGAGTGCCTGACACCTTTTGCTCTCTAAAAGCTGAAAATACTTCCAATTCTTTTGATTTTGGAATATTCAAAGATGCTATATGTATTGTGGGA
Protein sequenceShow/hide protein sequence
MMELMLHELEMIHEKATNKIALLQSEVIGAFWYLFTAERKTTCWEESYANWPLNCNYIGNLSANLSA