| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO73521.1 gag-pol polyprotein [Glycine max] | 1.4e-180 | 62.62 | Show/hide |
Query: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
++++ C+ IEP L DE+WINA MQEEL QF+RN VW LVP+P+ +IGTKWI KNKT+E +T+NKARLVAQGY Q+EGVDFDETFAPV R
Subjt: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
Query: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
LE+I LLL ++CI +FKLYQMDV AFLN YLNEEV Y QPKGF D +P HVY+L K LYGL+QAPRAWYERL +L+ +GY + + K LF +Q
Subjt: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
Query: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
+L + ML + ++SEFEMS+VGEL+ FLGLQ+KQ +SIF+SQ +Y KNIVKKFG+E + HKRTPA T +K++KD G D
Subjt: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
Query: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
LYRS+I SLL+LTASRPDI YAVG+C RYQ +P++SHL VKRILKYV+GTSD+ I+Y + + +LVGYCDADWAGS DDRK+TSGGCF+LGNNLISW
Subjt: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
Query: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
FSKKQNCVSLSTAEAEYIA S+C+QLVW K ML EY QD+MTLYCDNM+AI+ISKN VQHSRTK+IDIRH++IR+LV++KVITL H+ + Q+ADIF
Subjt: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
Query: IKPLDANTFEHLRTGLDAC
K LDAN FE LR L C
Subjt: IKPLDANTFEHLRTGLDAC
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| AAO73523.1 gag-pol polyprotein [Glycine max] | 3.6e-181 | 62.81 | Show/hide |
Query: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
++++ C+ IEP L DE+WINA MQEEL QF+RN VW LVP+P+ +IGTKWI KNKT+E +T+NKARLVAQGY Q+EGVDFDETFAPV R
Subjt: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
Query: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
LE+I LLL ++CI +FKLYQMDV AFLN YLNEEV Y QPKGF D +P HVY+L K LYGL+QAPRAWYERL +L+ +GY + + K LF +Q
Subjt: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
Query: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
+L + ML + ++SEFEMS+VGEL+ FLGLQ+KQ +SIF+SQ +Y KNIVKKFG+E + HKRTPA T +K++KD G D
Subjt: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
Query: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
K YRS+I SLL+LTASRPDI YAVG+C RYQ +P++SHL VKRILKYV+GTSD+ I+Y + ++S+LVGYCDADWAGS DDRK+TSGGCF+LGNNLISW
Subjt: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
Query: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
FSKKQNCVSLSTAEAEYIA S+C+QLVW K ML EY QD+MTLYCDNM+AI+ISKN VQHSRTK+IDIRH++IR+LV++KVITL H+ + Q+ADIF
Subjt: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
Query: IKPLDANTFEHLRTGLDAC
K LDAN FE LR L C
Subjt: IKPLDANTFEHLRTGLDAC
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| AAO73527.1 gag-pol polyprotein [Glycine max] | 1.4e-180 | 62.62 | Show/hide |
Query: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
++++ C+ IEP L DE+WINA MQEEL QF+RN VW LVP+P+ +IGTKWI KNKT+E +T+NKARLVAQGY Q+EGVDFDETFAPV R
Subjt: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
Query: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
LE+I LLL ++CI +FKLYQMDV AFLN YLNEEV Y QPKGF D +P HVY+L K LYGL+QAPRAWYERL +L+ +GY + + K LF +Q
Subjt: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
Query: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
+L + ML + ++SEFEMS+VGEL+ FLGLQ+KQ +SIF+SQ +Y KNIVKKFG+E + HKRTPA T +K++KD G D
Subjt: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
Query: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
LYRS+I SLL+LTASRPDI YAVG+C RYQ +P++SHL VKRILKYV+GTSD+ I+Y + + +LVGYCDADWAGS DDRK+TSGGCF+LGNNLISW
Subjt: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
Query: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
FSKKQNCVSLSTAEAEYIA S+C+QLVW K ML EY QD+MTLYCDNM+AI+ISKN VQHSRTK+IDIRH++IR+LV++KVITL H+ + Q+ADIF
Subjt: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
Query: IKPLDANTFEHLRTGLDAC
K LDAN FE LR L C
Subjt: IKPLDANTFEHLRTGLDAC
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| AAO73529.1 gag-pol polyprotein [Glycine max] | 4.7e-181 | 62.81 | Show/hide |
Query: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
++++ C+ IEP L DE+WINA MQEEL QF+RN VW LVP+P+ +IGTKWI KNKT+E +T+NKARLVAQGY Q+EGVDFDETFAPV R
Subjt: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
Query: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
LE+I LLL ++CI +FKLYQMDV AFLN YLNEE Y QPKGF+D +P HVY+L K LYGL+QAPRAWYERL +L+ +GY + + K LF +Q
Subjt: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
Query: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
+L + ML + ++SEFEMS+VGEL+ FLGLQ+KQ +SIF+SQ KY KNIVKKFG+E + HKRTPA T +K++KD G D
Subjt: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
Query: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
LYRS+I SLL+LTASRPDI YAVG+C RYQ +P++SHL VKRILKYV+GTSD+ I+Y + + S+LVGYCDADWAGS DDRK+TSGGCF+LGNNLISW
Subjt: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
Query: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
FSKKQNCVSLSTAEAEYIA S+C+QLVW K ML EY QD+MTLYCDNM+AI+ISKN VQHSRTK+IDIRH++IRELV++KVITL H+ + Q+ADIF
Subjt: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
Query: IKPLDANTFEHLRTGLDAC
K LDA FE LR L C
Subjt: IKPLDANTFEHLRTGLDAC
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| MCH79363.1 gag-pol polyprotein [Trifolium medium] | 4.4e-179 | 61.51 | Show/hide |
Query: IADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRL
I++ C+ IEP L DE+WI A MQEEL QF+R+ VW LVP+P +IGTKW+ +NK+DE VT+NKARLVAQGY+QVEG+DFDETFAPV RL
Subjt: IADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRL
Query: EAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMMN
E+I LL+ ++CI RFKLYQMDV AFLN YL+EEV Y QPKGFID YP HVYKL K LYGL+QAPRAWYERL I+L +GY + K E+ N
Subjt: EAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMMN
Query: SLLHKSML---------------MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHK
++ + + + ++SEFEMS+VGEL+ FLGLQ+KQ ++IF+SQ KY KNIVKKFG+E + +KRTPAAT +K+T+D G D
Subjt: SLLHKSML---------------MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHK
Query: LYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFS
+Y+S+I SLL+LTASRPDI +AVG+C RYQ +P+MSHL VKRILKY++GTSD+ ILYS S LVGYCDADWAGS DDRK+TSGGCFFLGNNLISWFS
Subjt: LYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFS
Query: KKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIK
KKQNCVSLSTAEAEYIA S+C+QL+W K ML +Y QD+MTL+CDN++AI+ISKN +QHSRTK+IDIRH+FIR+LVE V+TL H+ ++ QLADIF K
Subjt: KKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIK
Query: PLDANTFEHLRTGLDAC
LDAN +E LR L C
Subjt: PLDANTFEHLRTGLDAC
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A392LWM0 Gag-pol polyprotein (Fragment) | 2.1e-179 | 61.51 | Show/hide |
Query: IADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRL
I++ C+ IEP L DE+WI A MQEEL QF+R+ VW LVP+P +IGTKW+ +NK+DE VT+NKARLVAQGY+QVEG+DFDETFAPV RL
Subjt: IADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRL
Query: EAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMMN
E+I LL+ ++CI RFKLYQMDV AFLN YL+EEV Y QPKGFID YP HVYKL K LYGL+QAPRAWYERL I+L +GY + K E+ N
Subjt: EAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMMN
Query: SLLHKSML---------------MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHK
++ + + + ++SEFEMS+VGEL+ FLGLQ+KQ ++IF+SQ KY KNIVKKFG+E + +KRTPAAT +K+T+D G D
Subjt: SLLHKSML---------------MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHK
Query: LYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFS
+Y+S+I SLL+LTASRPDI +AVG+C RYQ +P+MSHL VKRILKY++GTSD+ ILYS S LVGYCDADWAGS DDRK+TSGGCFFLGNNLISWFS
Subjt: LYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFS
Query: KKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIK
KKQNCVSLSTAEAEYIA S+C+QL+W K ML +Y QD+MTL+CDN++AI+ISKN +QHSRTK+IDIRH+FIR+LVE V+TL H+ ++ QLADIF K
Subjt: KKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIK
Query: PLDANTFEHLRTGLDAC
LDAN +E LR L C
Subjt: PLDANTFEHLRTGLDAC
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| Q84VH6 Gag-pol polyprotein | 2.3e-181 | 62.81 | Show/hide |
Query: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
++++ C+ IEP L DE+WINA MQEEL QF+RN VW LVP+P+ +IGTKWI KNKT+E +T+NKARLVAQGY Q+EGVDFDETFAPV R
Subjt: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
Query: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
LE+I LLL ++CI +FKLYQMDV AFLN YLNEE Y QPKGF+D +P HVY+L K LYGL+QAPRAWYERL +L+ +GY + + K LF +Q
Subjt: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
Query: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
+L + ML + ++SEFEMS+VGEL+ FLGLQ+KQ +SIF+SQ KY KNIVKKFG+E + HKRTPA T +K++KD G D
Subjt: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
Query: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
LYRS+I SLL+LTASRPDI YAVG+C RYQ +P++SHL VKRILKYV+GTSD+ I+Y + + S+LVGYCDADWAGS DDRK+TSGGCF+LGNNLISW
Subjt: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
Query: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
FSKKQNCVSLSTAEAEYIA S+C+QLVW K ML EY QD+MTLYCDNM+AI+ISKN VQHSRTK+IDIRH++IRELV++KVITL H+ + Q+ADIF
Subjt: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
Query: IKPLDANTFEHLRTGLDAC
K LDA FE LR L C
Subjt: IKPLDANTFEHLRTGLDAC
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| Q84VH8 Gag-pol polyprotein | 6.6e-181 | 62.62 | Show/hide |
Query: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
++++ C+ IEP L DE+WINA MQEEL QF+RN VW LVP+P+ +IGTKWI KNKT+E +T+NKARLVAQGY Q+EGVDFDETFAPV R
Subjt: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
Query: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
LE+I LLL ++CI +FKLYQMDV AFLN YLNEEV Y QPKGF D +P HVY+L K LYGL+QAPRAWYERL +L+ +GY + + K LF +Q
Subjt: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
Query: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
+L + ML + ++SEFEMS+VGEL+ FLGLQ+KQ +SIF+SQ +Y KNIVKKFG+E + HKRTPA T +K++KD G D
Subjt: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
Query: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
LYRS+I SLL+LTASRPDI YAVG+C RYQ +P++SHL VKRILKYV+GTSD+ I+Y + + +LVGYCDADWAGS DDRK+TSGGCF+LGNNLISW
Subjt: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
Query: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
FSKKQNCVSLSTAEAEYIA S+C+QLVW K ML EY QD+MTLYCDNM+AI+ISKN VQHSRTK+IDIRH++IR+LV++KVITL H+ + Q+ADIF
Subjt: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
Query: IKPLDANTFEHLRTGLDAC
K LDAN FE LR L C
Subjt: IKPLDANTFEHLRTGLDAC
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| Q84VI2 Gag-pol polyprotein | 1.7e-181 | 62.81 | Show/hide |
Query: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
++++ C+ IEP L DE+WINA MQEEL QF+RN VW LVP+P+ +IGTKWI KNKT+E +T+NKARLVAQGY Q+EGVDFDETFAPV R
Subjt: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
Query: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
LE+I LLL ++CI +FKLYQMDV AFLN YLNEEV Y QPKGF D +P HVY+L K LYGL+QAPRAWYERL +L+ +GY + + K LF +Q
Subjt: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
Query: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
+L + ML + ++SEFEMS+VGEL+ FLGLQ+KQ +SIF+SQ +Y KNIVKKFG+E + HKRTPA T +K++KD G D
Subjt: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
Query: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
K YRS+I SLL+LTASRPDI YAVG+C RYQ +P++SHL VKRILKYV+GTSD+ I+Y + ++S+LVGYCDADWAGS DDRK+TSGGCF+LGNNLISW
Subjt: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
Query: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
FSKKQNCVSLSTAEAEYIA S+C+QLVW K ML EY QD+MTLYCDNM+AI+ISKN VQHSRTK+IDIRH++IR+LV++KVITL H+ + Q+ADIF
Subjt: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
Query: IKPLDANTFEHLRTGLDAC
K LDAN FE LR L C
Subjt: IKPLDANTFEHLRTGLDAC
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| Q84VI4 Gag-pol polyprotein | 6.6e-181 | 62.62 | Show/hide |
Query: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
++++ C+ IEP L DE+WINA MQEEL QF+RN VW LVP+P+ +IGTKWI KNKT+E +T+NKARLVAQGY Q+EGVDFDETFAPV R
Subjt: MIADLCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVR
Query: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
LE+I LLL ++CI +FKLYQMDV AFLN YLNEEV Y QPKGF D +P HVY+L K LYGL+QAPRAWYERL +L+ +GY + + K LF +Q
Subjt: LEAIGLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMM
Query: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
+L + ML + ++SEFEMS+VGEL+ FLGLQ+KQ +SIF+SQ +Y KNIVKKFG+E + HKRTPA T +K++KD G D
Subjt: NSL--------------LHKSML--MISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARAD
Query: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
LYRS+I SLL+LTASRPDI YAVG+C RYQ +P++SHL VKRILKYV+GTSD+ I+Y + + +LVGYCDADWAGS DDRK+TSGGCF+LGNNLISW
Subjt: HKLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISW
Query: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
FSKKQNCVSLSTAEAEYIA S+C+QLVW K ML EY QD+MTLYCDNM+AI+ISKN VQHSRTK+IDIRH++IR+LV++KVITL H+ + Q+ADIF
Subjt: FSKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIF
Query: IKPLDANTFEHLRTGLDAC
K LDAN FE LR L C
Subjt: IKPLDANTFEHLRTGLDAC
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 7.0e-71 | 34.7 | Show/hide |
Query: PSTFD-IFLKDE--YWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAIGLLLI
P++FD I +D+ W AI EL + NN WT+ +P+ I+ ++W+ K +E + KARLVA+G+ Q +D++ETFAPV R+ + +L
Subjt: PSTFD-IFLKDE--YWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAIGLLLI
Query: ISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTK-HYLFTEQMMNS----LL
+ K++QMDV AFLN L EE IY P+G +V KLNK +YGL+QA R W+E L + + + + Y+ + +N LL
Subjt: ISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTK-HYLFTEQMMNS----LL
Query: HKSMLMIS------------YLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHKLYRSII
+ ++I+ YL +F M+ + E+ F+G++I+ + + I++SQ YVK I+ KF +E TP +++ + N + RS+I
Subjt: HKSMLMIS------------YLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHKLYRSII
Query: ESLLH-LTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTT--SILVGYCDADWAGSTDDRKTTSGGCFFLGN-NLISWFSKK
L++ + +RPD+ AV I RY + + +KR+L+Y+ GT D ++++ + + ++GY D+DWAGS DRK+T+G F + + NLI W +K+
Subjt: ESLLH-LTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTT--SILVGYCDADWAGSTDDRKTTSGGCFFLGN-NLISWFSKK
Query: QNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGF-TQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIKP
QN V+ S+ EAEY+A+ A + +W K +L ++ + +Y DN I I+ N H R K+IDI+++F RE V+N VI L +I + QLADIF KP
Subjt: QNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGF-TQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIKP
Query: LDANTFEHLRTGL
L A F LR L
Subjt: LDANTFEHLRTGL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.1e-79 | 36.46 | Show/hide |
Query: MQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAIGLLLIISCIQRFKLYQMDVNGAFLN
MQEE+ ++N + LV PK + + KW+ K K D + + KARLV +G+ Q +G+DFDE F+PVV++ +I +L ++ ++ Q+DV AFL+
Subjt: MQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAIGLLLIISCIQRFKLYQMDVNGAFLN
Query: DYLNEEVIYAVQPKGFIDFEYPKH-VYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMMNS----LLHKSMLMI------------S
L EE IY QP+GF + KH V KLNK LYGL+QAPR WY + ++ + Y + F N+ LL+ ++I
Subjt: DYLNEEVIYAVQPKGFIDFEYPKH-VYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMMNS----LLHKSMLMI------------S
Query: YLESEFEMSMVGELSCFLGLQI--KQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHK------LYRSIIESLLH-LTASRP
L F+M +G LG++I ++ S +++SQEKY++ ++++F ++ ++ TP A +K++K + K Y S + SL++ + +RP
Subjt: YLESEFEMSMVGELSCFLGLQI--KQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHK------LYRSIIESLLH-LTASRP
Query: DIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVSLSTAEAEYIA
DIA+AVG+ R+ +P H EAVK IL+Y+ GT+ + + + IL GY DAD AG D+RK+++G F ISW SK Q CV+LST EAEYIA
Subjt: DIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVSLSTAEAEYIA
Query: VRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIKPLDANTFE
+++W K L E G Q +YCD+ +AID+SKN + H+RTK+ID+R+++IRE+V+++ + + I +N AD+ K + N FE
Subjt: VRSACTQLVWRKNMLHEYGFTQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIKPLDANTFE
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 6.4e-32 | 37.85 | Show/hide |
Query: NSLLHKSMLMISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHKLYRSIIESLLHLTA
N+LL+ ++I L S F M +G + FLG+QIK +F+SQ KY + I+ G+ + TP ++ + T D +RSI+ +L +LT
Subjt: NSLLHKSMLMISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHKLYRSIIESLLHLTA
Query: SRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILV-GYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVSLSTAEA
+RPDI+YAV I + +P ++ + +KR+L+YV GT F LY + + + V +CD+DWAG T R++T+G C FLG N+ISW +K+Q VS S+ E
Subjt: SRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILV-GYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVSLSTAEA
Query: EYIAVRSACTQLVW
EY A+ +L W
Subjt: EYIAVRSACTQLVW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-78 | 35.55 | Show/hide |
Query: EPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLV-PKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAIGLLLII
EP T LKDE W NA+ E Q N+ W LV P P I+G +WI K + + + KARLVA+GY Q G+D+ ETF+PV++ +I ++L +
Subjt: EPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLV-PKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAIGLLLII
Query: SCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMMNSLLHKSMLM
+ + + + Q+DVN AFL L ++V Y QP GFID + P +V KL K LYGL+QAPRAWY L YL G+ + ++ LF Q S+++ + +
Subjt: SCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMMNSLLHKSMLM
Query: ----------------ISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHKLYRSIIES
+ L F + EL FLG++ K+ + +SQ +Y+ +++ + + ++ TP A K++ + D YR I+ S
Subjt: ----------------ISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHKLYRSIIES
Query: LLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVSL
L +L +RPDI+YAV ++ P HL+A+KRIL+Y+ GT + I T L Y DADWAG DD +T+G +LG++ ISW SKKQ V
Subjt: LLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVSL
Query: STAEAEYIAVRSACTQLVWRKNMLHEYGF-TQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIKPLDANTF
S+ EAEY +V + +++ W ++L E G +YCDN+ A + N V HSR K+I I ++FIR V++ + + H+ ++ QLAD KPL F
Subjt: STAEAEYIAVRSACTQLVWRKNMLHEYGF-TQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIKPLDANTF
Query: EHLRTGLDACRI
++ + + R+
Subjt: EHLRTGLDACRI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.9e-78 | 34.57 | Show/hide |
Query: EPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLV-PKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAIGLLLII
EP T +KD+ W A+ E Q N+ W LV P P I+G +WI K + + + KARLVA+GY Q G+D+ ETF+PV++ +I ++L +
Subjt: EPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLV-PKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAIGLLLII
Query: SCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMMNSLLHKSMLM
+ + + + Q+DVN AFL L +EV Y QP GF+D + P +V +L K +YGL+QAPRAWY L YL G+ + ++ LF Q S+++ + +
Subjt: SCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFIDFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHYLFTEQMMNSLLHKSMLM
Query: ----------------ISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHKLYRSIIES
+ L F + +L FLG++ K+ + + +SQ +Y +++ + + ++ TP AT K+T + D YR I+ S
Subjt: ----------------ISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHKLYRSIIES
Query: LLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVSL
L +L +RPD++YAV +Y P H A+KR+L+Y+ GT D I T L Y DADWAG TDD +T+G +LG++ ISW SKKQ V
Subjt: LLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVSL
Query: STAEAEYIAVRSACTQLVWRKNMLHEYGF-TQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIKPLDANTF
S+ EAEY +V + ++L W ++L E G +YCDN+ A + N V HSR K+I + ++FIR V++ + + H+ ++ QLAD KPL F
Subjt: STAEAEYIAVRSACTQLVWRKNMLHEYGF-TQDIMTLYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRELVENKVITLAHIRSNLQLADIFIKPLDANTF
Query: EHLRTGLDACRI
++ + ++
Subjt: EHLRTGLDACRI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 4.4e-68 | 34.94 | Show/hide |
Query: LCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAI
+C A EPST++ + W A M +E+ + W + P K IG KW+ K K + + + KARLVA+GY Q EG+DF ETF+PV +L ++
Subjt: LCYTFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAI
Query: GLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFI----DFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHY---LFTE
L+L IS I F L+Q+D++ AFLN L+EE IY P G+ D P V L K +YGL+QA R W+ + ++ L G+ ++ Y +
Subjt: GLLLIISCIQRFKLYQMDVNGAFLNDYLNEEVIYAVQPKGFI----DFEYPKHVYKLNKVLYGLRQAPRAWYERLAIYLSCKGYFRAELTKHY---LFTE
Query: QMMNSLLHKSMLMI------------SYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADH
+ L++ ++I S L+S F++ +G L FLGL+I + + I I Q KY +++ + GL + P V + + G D
Subjt: QMMNSLLHKSMLMI------------SYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADH
Query: KLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWF
K YR +I L++L +R DI++AV ++ P+++H +AV +IL Y+ GT + YS L + DA + D R++T+G C FLG +LISW
Subjt: KLYRSIIESLLHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGCFFLGNNLISWF
Query: SKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMT-LYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRE
SKKQ VS S+AEAEY A+ A +++W E T L+CDN AI I+ N V H RTK+I+ + +RE
Subjt: SKKQNCVSLSTAEAEYIAVRSACTQLVWRKNMLHEYGFTQDIMT-LYCDNMNAIDISKNMVQHSRTKYIDIRHYFIRE
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 5.1e-08 | 31.82 | Show/hide |
Query: LHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGC-----FFLG
++LT +RPD+ +AV ++ + + + ++AV ++L YV GT + YS + L + D+DWA D R++ +G C +FLG
Subjt: LHLTASRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILVGYCDADWAGSTDDRKTTSGGC-----FFLG
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.6e-33 | 37.85 | Show/hide |
Query: NSLLHKSMLMISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHKLYRSIIESLLHLTA
N+LL+ ++I L S F M +G + FLG+QIK +F+SQ KY + I+ G+ + TP ++ + T D +RSI+ +L +LT
Subjt: NSLLHKSMLMISYLESEFEMSMVGELSCFLGLQIKQKSESIFISQEKYVKNIVKKFGLEQSRHKRTPAATQVKITKDTNGARADHKLYRSIIESLLHLTA
Query: SRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILV-GYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVSLSTAEA
+RPDI+YAV I + +P ++ + +KR+L+YV GT F LY + + + V +CD+DWAG T R++T+G C FLG N+ISW +K+Q VS S+ E
Subjt: SRPDIAYAVGICVRYQTDPQMSHLEAVKRILKYVHGTSDFRILYSYDTTSILV-GYCDADWAGSTDDRKTTSGGCFFLGNNLISWFSKKQNCVSLSTAEA
Query: EYIAVRSACTQLVW
EY A+ +L W
Subjt: EYIAVRSACTQLVW
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 1.9e-15 | 43.27 | Show/hide |
Query: TFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAIGLL
T EP + LKD W A MQEEL RN W LVP P I+G KW+ K K + + KARLVA+G+ Q EG+ F ET++PVVR I +
Subjt: TFAIEPSTFDIFLKDEYWINAIMQEELLQFRRNNVWTLVPKPKRAKIIGTKWILKNKTDEARCVTKNKARLVAQGYAQVEGVDFDETFAPVVRLEAIGLL
Query: LIIS
L ++
Subjt: LIIS
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