; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0030341 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0030341
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationCMiso1.1chr01:31389550..31390359
RNA-Seq ExpressionCmc01g0030341
SyntenyCmc01g0030341
Gene Ontology termsGO:0007165 - signal transduction (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034017.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.6e-12495.67Show/hide
Query:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS
        MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDN  YLNNLRMAISLFEKASGLKINLTKSVMVPVNV WPRAL+CASSWDISCHTLPL+
Subjt:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS

Query:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE
        YLGVPLGGNPKSKLF RNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWR FLWKGSCGSKGSH+INWSIVTKPKE
Subjt:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE

Query:  EGGLGISRLQITNQALLTKWLWRYYSEPNSL
        E GLGISRLQITNQALL+KWLWRYYSEPNSL
Subjt:  EGGLGISRLQITNQALLTKWLWRYYSEPNSL

KAA0045138.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.5e-12279.55Show/hide
Query:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS
        MDYLSRLLSHLES+GAIKGV L ++CNISHILFADDILLF+EDN ++LNNLRMA+SLFE+ASGLKINL KS +VPVNV   RA +CAS W ISCH+LPLS
Subjt:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS

Query:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE
        YLGVPLGGNPKS LFWRN+ED+IQKKL+NWKYA ISK GRLTLIKSTLSSLPIYQLSVFQAPS T KNIEK WR+FLWKG+ GS+GSHLINW+ V+K KE
Subjt:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE

Query:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE
        EG LGISRL +TN+ALLTKWLWRY SEPN+LWRRLI  KY+  +PGD+PSNISSS+PKAPWRSII+NI+
Subjt:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE

KAA0050814.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.3e-14794.05Show/hide
Query:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS
        MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDN  YL NLRMAISLFEKASGLKINL+KSVMVPVNVPWPRAL+CASSW+ISCHTLPL+
Subjt:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS

Query:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE
        YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWR FLWKGSCGSKGSHLINW+IVTKPKE
Subjt:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE

Query:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE
        EG LGIS+LQITNQALL+KWLWRYYSEPNSLWRRLI+IKYQ KHPGD+PSNISSSSPKAPWRSIINNI+
Subjt:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE

TYK05690.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.0e-14795.54Show/hide
Query:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS
        MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDN  YLNNLRMAISLFEKASGLKINLTKSVMV VNV WPRAL+CASSWDISCHTLPL+
Subjt:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS

Query:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE
        YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQA SSTYKNIEKLWR FLWKGSCGSKGSHLINWSIVTKPKE
Subjt:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE

Query:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE
        EGGLGISRLQITNQALL+KWLWRYYSEPNSLWRRLI+IKYQ KHPGDLPSNISSSS KAPWRSIINNIE
Subjt:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE

TYK05808.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.9e-13788.48Show/hide
Query:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS
        MDYLSRLLSHLES+GAIKGVCLANDCNISHILFADDILLFVEDN  +LNNLRMA+SLFEKASGLKINL+KS MVPVNV W RAL+CASSW ISCHTLPL+
Subjt:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS

Query:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE
        YLGVPLGGNPKS +FWRNIEDRIQKKL+NWKYAHISKGGRLTLIKSTLSSL IYQLSVFQAP STYKNIEKLWR FLWKGS G KGSHLINWSIVTK KE
Subjt:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE

Query:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE
        EGGLGISRLQ+ NQALL+KWLWRYYSEPNSLWRRLI+IKY+ KHPGD+PSNISSSS KAPW+SIINNI+
Subjt:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE

TrEMBL top hitse value%identityAlignment
A0A5A7TQI1 LINE-1 retrotransposable element ORF2 protein2.2e-12279.55Show/hide
Query:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS
        MDYLSRLLSHLES+GAIKGV L ++CNISHILFADDILLF+EDN ++LNNLRMA+SLFE+ASGLKINL KS +VPVNV   RA +CAS W ISCH+LPLS
Subjt:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS

Query:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE
        YLGVPLGGNPKS LFWRN+ED+IQKKL+NWKYA ISK GRLTLIKSTLSSLPIYQLSVFQAPS T KNIEK WR+FLWKG+ GS+GSHLINW+ V+K KE
Subjt:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE

Query:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE
        EG LGISRL +TN+ALLTKWLWRY SEPN+LWRRLI  KY+  +PGD+PSNISSS+PKAPWRSII+NI+
Subjt:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE

A0A5D3BT10 LINE-1 retrotransposable element ORF2 protein8.0e-12595.67Show/hide
Query:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS
        MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDN  YLNNLRMAISLFEKASGLKINLTKSVMVPVNV WPRAL+CASSWDISCHTLPL+
Subjt:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS

Query:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE
        YLGVPLGGNPKSKLF RNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWR FLWKGSCGSKGSH+INWSIVTKPKE
Subjt:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE

Query:  EGGLGISRLQITNQALLTKWLWRYYSEPNSL
        E GLGISRLQITNQALL+KWLWRYYSEPNSL
Subjt:  EGGLGISRLQITNQALLTKWLWRYYSEPNSL

A0A5D3C2W8 LINE-1 retrotransposable element ORF2 protein2.0e-14795.54Show/hide
Query:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS
        MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDN  YLNNLRMAISLFEKASGLKINLTKSVMV VNV WPRAL+CASSWDISCHTLPL+
Subjt:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS

Query:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE
        YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQA SSTYKNIEKLWR FLWKGSCGSKGSHLINWSIVTKPKE
Subjt:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE

Query:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE
        EGGLGISRLQITNQALL+KWLWRYYSEPNSLWRRLI+IKYQ KHPGDLPSNISSSS KAPWRSIINNIE
Subjt:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE

A0A5D3C3M3 LINE-1 retrotransposable element ORF2 protein2.4e-13788.48Show/hide
Query:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS
        MDYLSRLLSHLES+GAIKGVCLANDCNISHILFADDILLFVEDN  +LNNLRMA+SLFEKASGLKINL+KS MVPVNV W RAL+CASSW ISCHTLPL+
Subjt:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS

Query:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE
        YLGVPLGGNPKS +FWRNIEDRIQKKL+NWKYAHISKGGRLTLIKSTLSSL IYQLSVFQAP STYKNIEKLWR FLWKGS G KGSHLINWSIVTK KE
Subjt:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE

Query:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE
        EGGLGISRLQ+ NQALL+KWLWRYYSEPNSLWRRLI+IKY+ KHPGD+PSNISSSS KAPW+SIINNI+
Subjt:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE

A0A5D3C9J6 LINE-1 retrotransposable element ORF2 protein2.5e-14794.05Show/hide
Query:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS
        MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDN  YL NLRMAISLFEKASGLKINL+KSVMVPVNVPWPRAL+CASSW+ISCHTLPL+
Subjt:  MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLS

Query:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE
        YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWR FLWKGSCGSKGSHLINW+IVTKPKE
Subjt:  YLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE

Query:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE
        EG LGIS+LQITNQALL+KWLWRYYSEPNSLWRRLI+IKYQ KHPGD+PSNISSSSPKAPWRSIINNI+
Subjt:  EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein3.0e-1225.11Show/hide
Query:  IKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLSYLGVPLGGNPKS--KL
        IKG+ L  +  +   LFADD+++++E+      NL   IS F K SG KIN+ KS     N               +  +  + YLG+ L  + K   K 
Subjt:  IKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLSYLGVPLGGNPKS--KL

Query:  FWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSV--FQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKEEGGLGISRLQIT
         ++ +   I++  + WK    S  GR+ ++K  +    IY+ +    + P + +  +EK   +F+W     ++    I  SI+++  + GG+ +   ++ 
Subjt:  FWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSV--FQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKEEGGLGISRLQIT

Query:  NQALLTKWLWRYYSEPN-SLWRR
         +A +TK  W +Y   +   W R
Subjt:  NQALLTKWLWRYYSEPN-SLWRR

P08548 LINE-1 reverse transcriptase homolog4.4e-1124Show/hide
Query:  AIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLSYLGVPLGGNPKS--K
        AIKG+ + ++  I   LFADD+++++E+       L   I  +   SG KIN  KSV                S   +     + YLGV L  + K   K
Subjt:  AIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLSYLGVPLGGNPKS--K

Query:  LFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSV--FQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKEEGGLGISRLQI
          +  +   I + ++ WK    S  GR+ ++K ++    IY  +    +AP S +K++EK+   F+W     ++    I  ++++   + GG+ +  L++
Subjt:  LFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSV--FQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKEEGGLGISRLQI

Query:  TNQALLTKWLWRYYSEPN-SLWRRL
          ++++ K  W ++      +W R+
Subjt:  TNQALLTKWLWRYYSEPN-SLWRRL

P0C2F6 Putative ribonuclease H protein At1g657507.7e-2438.36Show/hide
Query:  IEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKEEGGLGISRLQITNQALLT
        I +R+  ++S W+   +S  GRLTL K+ LSS+P++ +S    P S    +++L R FLW  +   K  HL+ WS V  PK+EGGLG+   +  N+AL++
Subjt:  IEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKEEGGLGISRLQITNQALLT

Query:  KWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSI
        K  WR   E NSLW  ++  KY      D    I   S  + WRSI
Subjt:  KWLWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSI

P93295 Uncharacterized mitochondrial protein AtMg003103.8e-0730.58Show/hide
Query:  SLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE-EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDL
        +LP+Y +S F+      K +      F W      +    + W  + K KE +GGLG   L   NQALL K  +R   +P++L  RL+  +Y   H   +
Subjt:  SLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE-EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDL

Query:  PSNISSSSPKAPWRSIINNIE
          ++  + P   WRSII+  E
Subjt:  PSNISSSSPKAPWRSIINNIE

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.4e-1831.76Show/hide
Query:  DCASSWDISCHTLPLSYLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGS
        D   S+  +   LP+ YLG+PL     +   +  + ++I+ ++  W   H+S  GRL LI S + SL  + +S F+ PS+  K I+ +   FLW G   +
Subjt:  DCASSWDISCHTLPLSYLGVPLGGNPKSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGS

Query:  KGSHLINWSIVTKPKEEGGLGISRLQ---------ITNQALLTKWLWR
             + WS V  PK+EGGLGI  L+         I+    L  W+W+
Subjt:  KGSHLINWSIVTKPKEEGGLGISRLQ---------ITNQALLTKWLWR

AT4G29090.1 Ribonuclease H-like superfamily protein7.6e-1132.17Show/hide
Query:  SLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKEEGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLP
        +LP Y ++ F  P +  K I  +   F W+    +KG H   W  ++  K EGG+G   ++  N ALL K +WR  S P SL  ++   +Y   H  D  
Subjt:  SLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKEEGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDLP

Query:  SNISSSSPKAPWRSI
        +    S P   W+SI
Subjt:  SNISSSSPKAPWRSI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.7e-0830.58Show/hide
Query:  SLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE-EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDL
        +LP+Y +S F+      K +      F W      +    + W  + K KE +GGLG   L   NQALL K  +R   +P++L  RL+  +Y   H   +
Subjt:  SLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKE-EGGLGISRLQITNQALLTKWLWRYYSEPNSLWRRLIYIKYQSKHPGDL

Query:  PSNISSSSPKAPWRSIINNIE
          ++  + P   WRSII+  E
Subjt:  PSNISSSSPKAPWRSIINNIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTATCTTAGCAGGCTCTTAAGTCATTTGGAGTCTACTGGCGCCATCAAAGGAGTGTGCCTTGCAAATGATTGTAACATCTCGCATATCCTCTTCGCTGATGACAT
TCTCCTTTTTGTTGAAGATAATGCCTTTTATCTGAACAATCTAAGAATGGCTATTTCTTTGTTTGAAAAGGCCTCGGGGCTCAAAATTAATTTGACAAAATCAGTTATGG
TTCCAGTTAATGTCCCTTGGCCTAGAGCTTTGGATTGTGCTTCTTCTTGGGATATTTCTTGCCACACGCTTCCTCTATCCTACTTAGGAGTCCCCCTTGGTGGAAACCCA
AAATCCAAACTTTTCTGGAGGAATATTGAGGACAGAATTCAAAAAAAGCTTAGCAACTGGAAATATGCCCACATCTCAAAAGGTGGAAGACTCACGCTAATCAAGTCTAC
TCTCAGTAGTCTCCCGATTTATCAGCTTTCTGTTTTTCAAGCTCCATCCTCCACGTATAAGAACATTGAAAAACTTTGGAGAAGATTCCTTTGGAAAGGCAGCTGCGGTT
CAAAAGGGTCTCACTTAATCAACTGGTCAATAGTTACAAAGCCTAAAGAAGAGGGTGGGCTGGGCATCTCGAGACTCCAAATTACAAATCAAGCTCTCTTAACGAAGTGG
CTTTGGCGTTACTATTCGGAGCCTAATTCCCTTTGGAGGAGACTAATCTATATAAAGTATCAAAGTAAACACCCTGGGGATCTACCTTCAAACATTTCCTCTAGTTCCCC
TAAAGCTCCGTGGAGATCTATTATTAACAACATTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTATCTTAGCAGGCTCTTAAGTCATTTGGAGTCTACTGGCGCCATCAAAGGAGTGTGCCTTGCAAATGATTGTAACATCTCGCATATCCTCTTCGCTGATGACAT
TCTCCTTTTTGTTGAAGATAATGCCTTTTATCTGAACAATCTAAGAATGGCTATTTCTTTGTTTGAAAAGGCCTCGGGGCTCAAAATTAATTTGACAAAATCAGTTATGG
TTCCAGTTAATGTCCCTTGGCCTAGAGCTTTGGATTGTGCTTCTTCTTGGGATATTTCTTGCCACACGCTTCCTCTATCCTACTTAGGAGTCCCCCTTGGTGGAAACCCA
AAATCCAAACTTTTCTGGAGGAATATTGAGGACAGAATTCAAAAAAAGCTTAGCAACTGGAAATATGCCCACATCTCAAAAGGTGGAAGACTCACGCTAATCAAGTCTAC
TCTCAGTAGTCTCCCGATTTATCAGCTTTCTGTTTTTCAAGCTCCATCCTCCACGTATAAGAACATTGAAAAACTTTGGAGAAGATTCCTTTGGAAAGGCAGCTGCGGTT
CAAAAGGGTCTCACTTAATCAACTGGTCAATAGTTACAAAGCCTAAAGAAGAGGGTGGGCTGGGCATCTCGAGACTCCAAATTACAAATCAAGCTCTCTTAACGAAGTGG
CTTTGGCGTTACTATTCGGAGCCTAATTCCCTTTGGAGGAGACTAATCTATATAAAGTATCAAAGTAAACACCCTGGGGATCTACCTTCAAACATTTCCTCTAGTTCCCC
TAAAGCTCCGTGGAGATCTATTATTAACAACATTGAATGA
Protein sequenceShow/hide protein sequence
MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNAFYLNNLRMAISLFEKASGLKINLTKSVMVPVNVPWPRALDCASSWDISCHTLPLSYLGVPLGGNP
KSKLFWRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRRFLWKGSCGSKGSHLINWSIVTKPKEEGGLGISRLQITNQALLTKW
LWRYYSEPNSLWRRLIYIKYQSKHPGDLPSNISSSSPKAPWRSIINNIE