CuGenDBv2

Gene ID	Cmc01g0032251
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein FRA10AC1
Genome location	CMiso1.1chr01:32794690..32797341
RNA-Seq Expression	Cmc01g0032251
Synteny	Cmc01g0032251
Gene Ontology terms	NA
InterPro domains	IPR019129 - Folate-sensitive fragile site protein Fra10Ac1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058628.1 protein FRA10AC1 [Cucumis melo var. makuwa]

5.7e-54

72.83

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Query:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC
        MEKEVISGKGQFICGNKHCDEKNGLASYE                                               VNFSYFEAGENKQALVKLVTCERC
Subjt:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC

Query:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
        SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
Subjt:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP

XP_004135932.1 protein FRA10AC1 isoform X2 [Cucumis sativus]

4.3e-49

68.02

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Query:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERCS
        EKEV+SGKGQFICGNKHCDEK+GLASYE                                               VNFSYFEAGENKQALVKLVTC RCS
Subjt:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERCS

Query:  KKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
        KKLHYKR+KEKEK+ERKEQEMSKRKRPSDDSSD+EDEGSRTRRKG KASTSFGDHKAD+KEEFDEYLEGMFP
Subjt:  KKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP

XP_008461295.1 PREDICTED: protein FRA10AC1 [Cucumis melo]

5.7e-54

72.83

Show/hide

Query:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC
        MEKEVISGKGQFICGNKHCDEKNGLASYE                                               VNFSYFEAGENKQALVKLVTCERC
Subjt:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC

Query:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
        SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
Subjt:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP

XP_031745033.1 protein FRA10AC1 isoform X1 [Cucumis sativus]

6.8e-47

64.64

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Query:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTC----
        EKEV+SGKGQFICGNKHCDEK+GLASYE                                               VNFSYFEAGENKQALVKLVTC    
Subjt:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTC----

Query:  -----ERCSKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
              RCSKKLHYKR+KEKEK+ERKEQEMSKRKRPSDDSSD+EDEGSRTRRKG KASTSFGDHKAD+KEEFDEYLEGMFP
Subjt:  -----ERCSKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP

XP_038898609.1 protein FRA10AC1 isoform X2 [Benincasa hispida]

6.8e-47

66.28

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Query:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERCS
        EKEVISGKGQFICGNKHCDEK+GLASYE                                               VNFSYFEAGENKQALVKLVTCERC 
Subjt:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERCS

Query:  KKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
        KKLHYKRKKEKEK ERKEQ+MSKRKR SDD+SDSEDEGSRTRRKG KASTS+GDHKA +KE+FDEYLEGMFP
Subjt:  KKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9S1 Uncharacterized protein

2.1e-49

68.02

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Query:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERCS
        EKEV+SGKGQFICGNKHCDEK+GLASYE                                               VNFSYFEAGENKQALVKLVTC RCS
Subjt:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERCS

Query:  KKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
        KKLHYKR+KEKEK+ERKEQEMSKRKRPSDDSSD+EDEGSRTRRKG KASTSFGDHKAD+KEEFDEYLEGMFP
Subjt:  KKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP

A0A1S3CFL8 protein FRA10AC1

2.8e-54

72.83

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Query:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC
        MEKEVISGKGQFICGNKHCDEKNGLASYE                                               VNFSYFEAGENKQALVKLVTCERC
Subjt:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC

Query:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
        SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
Subjt:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP

A0A5A7UTX2 Protein FRA10AC1

2.8e-54

72.83

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Query:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC
        MEKEVISGKGQFICGNKHCDEKNGLASYE                                               VNFSYFEAGENKQALVKLVTCERC
Subjt:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC

Query:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
        SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP
Subjt:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP

A0A6J1HB92 protein FRA10AC1 isoform X1

1.5e-44

64.94

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Query:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC
        +EKEV+SGKGQFICGNKHCDEK+GLASYE                                               VNFSYFEAGENKQALVKLVTCERC
Subjt:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC

Query:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRT-RRKGNKASTSFGDHKADNKEEFDEYLEGMFP
        SKKLHYKR KEKEK+ER EQEMSKRKRPSDDSSDSED GSRT RRKG KASTS  D KAD+KE+FDEYLEGMFP
Subjt:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRT-RRKGNKASTSFGDHKADNKEEFDEYLEGMFP

A0A6J1KWV6 protein FRA10AC1 isoform X2

4.4e-44

64.37

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Query:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC
        +EKEV+SGKGQFICGNKHCDEK+GLASYE                                               VNFSYFEAGENKQALVKLVTCERC
Subjt:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC

Query:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRT-RRKGNKASTSFGDHKADNKEEFDEYLEGMFP
        SKKLHYKR KEKEK+ER EQEMSKRKRPSDDSSDSED GSRT RRKG KASTS  D K D+KE+FDEYLEGMFP
Subjt:  SKKLHYKRKKEKEKVERKEQEMSKRKRPSDDSSDSEDEGSRT-RRKGNKASTSFGDHKADNKEEFDEYLEGMFP

SwissProt top hits

e value

%identity

Alignment

Q5FVF1 Protein FRA10AC1 homolog

4.0e-10

32.5

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Query:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC
        +EKEVISGKGQF CGNK CDEK GL S+E                                               VNF Y E GE + ALVKL  C+ C
Subjt:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC

Query:  SKKL--HYKR-------KKEKEKVERKEQ-EMSKRKRPSDDSSDSEDEG---------SRTRRKGNKASTSFGD---------HKADNKEEFDEYLEGMF
        S KL  H++R       K+ K K E  E    + R   S+++S  +DEG         SR R  G + S S  +          +   +EEFD+Y + +F
Subjt:  SKKL--HYKR-------KKEKEKVERKEQ-EMSKRKRPSDDSSDSEDEG---------SRTRRKGNKASTSFGD---------HKADNKEEFDEYLEGMF

Q70Z53 Protein FRA10AC1

6.9e-10

29.5

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Query:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC
        +EKEVISGKGQF CGNK+CD+K GL S+E                                               VNF Y E GE + ALVKL  C+ C
Subjt:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC

Query:  SKKLHY-------KRKKEKEKVERKEQEMSKRK---RPSDDSSDSEDEGSRTRRKGNKASTSFGDH------------------KADNKEEFDEYLEGMF
        S KL++       K KK K+K ++  +E S +K     ++++S  +D+G  + +K   +     D                   +   +EEFDEY + +F
Subjt:  SKKLHY-------KRKKEKEKVERKEQEMSKRK---RPSDDSSDSEDEGSRTRRKGNKASTSFGDH------------------KADNKEEFDEYLEGMF

Q8BP78 Protein FRA10AC1 homolog

3.4e-09

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Query:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC
        +EKEVISGKGQF CGNK C+EK GL S+E                                               VNF Y E GE + ALVKL  C+ C
Subjt:  MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERC

Query:  SKKL--HYKRK-----KEKEKVERKEQEMSKRKR---PSDDSSDSEDEG---------SRTRRKGNKASTSFGD---------HKADNKEEFDEYLEGMF
        S KL  H++RK     K+K K   +  E  ++K    PS+++S  +DEG         SR R    + S S  +          +   +EEFD+Y + +F
Subjt:  SKKL--HYKRK-----KEKEKVERKEQEMSKRKR---PSDDSSDSEDEG---------SRTRRKGNKASTSFGD---------HKADNKEEFDEYLEGMF

Arabidopsis top hits

e value

%identity

Alignment

AT4G15030.1 CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink).

3.9e-24

39.51

Show/hide

Query:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERCS
        EKEV++GKGQF+CG+KHCDEK GLASYE                                               VNFSY EAGE+KQALVKLV CERC+
Subjt:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERCS

Query:  KKLHYKRKKEKEKVERKEQEMSKRKRP---SDDSSDSED---EGSRT-------------------------RRKG--NKASTSFGDHKADNKEEFDEYL
        +KL+YK++KE E+ E KE++  KRKR    S+D +D E+   EG R+                         RRKG   K+     D +  + E FDEY+
Subjt:  KKLHYKRKKEKEKVERKEQEMSKRKRP---SDDSSDSED---EGSRT-------------------------RRKG--NKASTSFGDHKADNKEEFDEYL

Query:  EGMFP
        EGMFP
Subjt:  EGMFP

AT4G15030.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8498 Blast hits to 5699 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3838; Fungi - 743; Plants - 650; Viruses - 76; Other Eukaryotes - 2921 (source: NCBI BLink).

3.9e-24

39.51

Show/hide

Query:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERCS
        EKEV++GKGQF+CG+KHCDEK GLASYE                                               VNFSY EAGE+KQALVKLV CERC+
Subjt:  EKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERCS

Query:  KKLHYKRKKEKEKVERKEQEMSKRKRP---SDDSSDSED---EGSRT-------------------------RRKG--NKASTSFGDHKADNKEEFDEYL
        +KL+YK++KE E+ E KE++  KRKR    S+D +D E+   EG R+                         RRKG   K+     D +  + E FDEY+
Subjt:  KKLHYKRKKEKEKVERKEQEMSKRKRP---SDDSSDSED---EGSRT-------------------------RRKG--NKASTSFGDHKADNKEEFDEYL

Query:  EGMFP
        EGMFP
Subjt:  EGMFP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGAAGGAAGTAATATCTGGGAAAGGGCAGTTCATATGCGGTAACAAGCATTGTGATGAGAAGAATGGTTTAGCAAGCTATGAGGTAGTATTAATATCTCTTGATGA
GCTGGGATGTTCAAATTTGGAATTGTTTCCCATTTGTTACAAAATAAATATTCTAAATGATCGATGTTGGCTGCTTCTATTTGTTACTGCATGTCTTTTTACTTCTCTGT
TATTGCAGGTGAACTTTTCTTATTTTGAAGCAGGAGAAAACAAGCAAGCCCTTGTAAAGTTGGTAACATGTGAGAGATGCTCAAAGAAGCTTCACTACAAGCGAAAGAAA
GAAAAGGAGAAAGTGGAAAGGAAGGAGCAAGAAATGTCCAAAAGGAAGAGGCCAAGTGATGACAGTTCAGATAGTGAGGATGAAGGGAGCAGAACGAGGAGAAAAGGAAA
TAAGGCCTCAACATCATTTGGGGATCATAAAGCTGATAACAAAGAAGAGTTTGATGAATATCTGGAGGGAATGTTTCCATAA

mRNA sequence

Show/hide mRNA sequence

GTATGGAGAAGGAAGTAATATCTGGGAAAGGGCAGTTCATATGCGGTAACAAGCATTGTGATGAGAAGAATGGTTTAGCAAGCTATGAGGTAGTATTAATATCTCTTGAT
GAGCTGGGATGTTCAAATTTGGAATTGTTTCCCATTTGTTACAAAATAAATATTCTAAATGATCGATGTTGGCTGCTTCTATTTGTTACTGCATGTCTTTTTACTTCTCT
GTTATTGCAGGTGAACTTTTCTTATTTTGAAGCAGGAGAAAACAAGCAAGCCCTTGTAAAGTTGGTAACATGTGAGAGATGCTCAAAGAAGCTTCACTACAAGCGAAAGA
AAGAAAAGGAGAAAGTGGAAAGGAAGGAGCAAGAAATGTCCAAAAGGAAGAGGCCAAGTGATGACAGTTCAGATAGTGAGGATGAAGGGAGCAGAACGAGGAGAAAAGGA
AATAAGGCCTCAACATCATTTGGGGATCATAAAGCTGATAACAAAGAAGAGTTTGATGAATATCTGGAGGGAATGTTTCCATAATAATGTCGATGATGATGAATATAGGC
CTCAAGGCTACACTTCCTGGCCTCCACAACCATTGTTTTCAGCGATCCGCTTCCTTGAAACCTTTTCGAAGTCAAAAAATGGCTGTGGTTGTATTGTACGTACTCTCTTT
TTTCTTGAAACTTATATCTTAGCATTAAACATCATGTCTGTGTGGTTGTTTCCTAAGTCGTTTTATTGTTTT

Protein sequence

Show/hide protein sequence

MEKEVISGKGQFICGNKHCDEKNGLASYEVVLISLDELGCSNLELFPICYKINILNDRCWLLLFVTACLFTSLLLQVNFSYFEAGENKQALVKLVTCERCSKKLHYKRKK
EKEKVERKEQEMSKRKRPSDDSSDSEDEGSRTRRKGNKASTSFGDHKADNKEEFDEYLEGMFP

Cmc01g0032251 (gene) of Melon (Charmono) v1.1 genome