CuGenDBv2

Gene ID	Cmc01g0033201
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Genome location	CMiso1.1chr01:33405418..33411087
RNA-Seq Expression	Cmc01g0033201
Synteny	Cmc01g0033201
Gene Ontology terms	NA
InterPro domains	IPR018962 - Domain of unknown function DUF1995 IPR044687 - Protein LOW PSII ACCUMULATION 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058708.1 protein LOW PSII ACCUMULATION 3 [Cucumis melo var. makuwa]

3.3e-219

99.48

Show/hide

Query:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        MPIMAF+SSPPYIPSLSRPF SNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_004135877.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus]

4.8e-210

95.88

Show/hide

Query:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        M IMAF+SSPP+IPSLS PF +NFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHC DKERAAPVTQ SDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAG VTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQY GPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_008461181.1 PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis melo]

5.2e-220

100

Show/hide

Query:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_022992481.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita maxima]

1.1e-206

92.84

Show/hide

Query:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSS---LRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        M IMAF+SSPP+IPSL RPF SNFLFSPISSS   LRRST SSLFGAQTLA SGFCFRIHC DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSS---LRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RAS+LFKTA+DSIDGIT+SSLDD+PAGPVTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_038900014.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Benincasa hispida]

9.7e-211

95.65

Show/hide

Query:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSS---LRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        M IMAF+SSPP IPSLSR F SNFLFSPISSS   LRRST SSLFGAQTLA SGFCFRIHCRDKER +PVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSS---LRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDGK+RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAGPVTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        VRNTLDFDFED+N+GRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA03 DUF1995 domain-containing protein

2.3e-210

95.88

Show/hide

Query:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        M IMAF+SSPP+IPSLS PF +NFLFSPISSSLRRST SSLFGAQTLAASGFCFRIHC DKERAAPVTQ SDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRAS+LFKTA+DSIDGITVSSLDDVPAG VTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQY GPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A1S3CFB8 protein LOW PSII ACCUMULATION 3, chloroplastic

2.5e-220

100

Show/hide

Query:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A5A7UU42 Protein LOW PSII ACCUMULATION 3

1.6e-219

99.48

Show/hide

Query:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
        MPIMAF+SSPPYIPSLSRPF SNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL
Subjt:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYAL

Query:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN
        EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN
Subjt:  EDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRN

Query:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
        TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP
Subjt:  TLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAP

Query:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  YIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A6J1GQW6 protein LOW PSII ACCUMULATION 3, chloroplastic

9.2e-207

92.84

Show/hide

Query:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSS---LRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        M IMAF+SSPP+IPSL RPF SNFLFSPI+SS   LRRST SSLFGAQTLA SGFCFRIHC DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSS---LRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RAS+LFKTA+DSIDGIT+SSLDDVPAGPVTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A6J1JTN7 protein LOW PSII ACCUMULATION 3, chloroplastic

5.4e-207

92.84

Show/hide

Query:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSS---LRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        M IMAF+SSPP+IPSL RPF SNFLFSPISSS   LRRST SSLFGAQTLA SGFCFRIHC DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MPIMAFISSPPYIPSLSRPFQSNFLFSPISSS---LRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RAS+LFKTA+DSIDGIT+SSLDD+PAGPVTSFFRS
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  VAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

SwissProt top hits

e value

%identity

Alignment

Q8H0W0 Protein LPA3

3.4e-150

78.5

Show/hide

Query:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASEL
        + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K RLEIDFPPLPS+ISSYKGSSD+FIDANIQLA+ V R LQEK  TR+CIVFPDKPEKRRAS+ 
Subjt:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASEL

Query:  FKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLG
        FK A DS+DGI++ SLDD+P   VT+FFRS+R+TLDFDFED+N G W   +PP+LYIFINCSTREL  IEK+VETFASS P LLFNLEL+TLRADLGLLG
Subjt:  FKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLG

Query:  FPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG
        FPPKDLHYRFLSQFIPVFYIR REYSKTVAVAP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Subjt:  FPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG

Query:  YKAATWWEEDVDSEVSSAWRS
        YK+ATWWEEDV+ E SS WR+
Subjt:  YKAATWWEEDVDSEVSSAWRS

Arabidopsis top hits

e value

%identity

Alignment

AT1G73060.1 Low PSII Accumulation 3

2.4e-151

78.5

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Query:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASEL
        + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K RLEIDFPPLPS+ISSYKGSSD+FIDANIQLA+ V R LQEK  TR+CIVFPDKPEKRRAS+ 
Subjt:  TQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASEL

Query:  FKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLG
        FK A DS+DGI++ SLDD+P   VT+FFRS+R+TLDFDFED+N G W   +PP+LYIFINCSTREL  IEK+VETFASS P LLFNLEL+TLRADLGLLG
Subjt:  FKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLG

Query:  FPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG
        FPPKDLHYRFLSQFIPVFYIR REYSKTVAVAP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRG
Subjt:  FPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRG

Query:  YKAATWWEEDVDSEVSSAWRS
        YK+ATWWEEDV+ E SS WR+
Subjt:  YKAATWWEEDVDSEVSSAWRS

AT5G48790.1 Domain of unknown function (DUF1995)

1.3e-11

25.36

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Query:  SPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRD----------KERAAPVTQSSDPKAGVP-IYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLP
        SP  S     +P+SL G     +      +H ++          K RA  V+   +    V  +  P+ Y  L++ A  ++  AL+D K  +EI+FP   
Subjt:  SPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRD----------KERAAPVTQSSDPKAGVP-IYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLP

Query:  SNISSYKGSSD---EFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASE-LFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNA
        S ++S  G  +   E  ++   +     R L  ++   + I FP+  E + A + +F      +D +T  SL +        FF  V+           A
Subjt:  SNISSYKGSSD---EFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASE-LFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNA

Query:  GRWTSSDPPSLYIFINCSTRELGLIEK-YVETFASSIPTL-LFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKT----VAVAPYIVNY
         R    D   L  +   +  E+ ++E+ Y E   ++   L +FN EL+ +R+     G+ PK             FY ++   +KT    +    YI N+
Subjt:  GRWTSSDPPSLYIFINCSTRELGLIEK-YVETFASSIPTL-LFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKT----VAVAPYIVNY

Query:  ----SGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL
             G LFR YPGPWQV L+++ N Y CV + E+  +L E   ++L
Subjt:  ----SGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL

Sequences

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CDS sequence

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ATGCCGATCATGGCGTTTATCTCTTCACCACCCTACATTCCCTCTCTTTCTCGACCGTTTCAGAGCAACTTTCTCTTTTCTCCCATTTCCTCTTCCTTACGGCGTTCTAC
TCCATCCAGTTTATTTGGCGCTCAAACTTTGGCGGCTTCCGGATTTTGCTTTAGAATACACTGTCGTGACAAAGAACGAGCTGCACCGGTTACTCAGAGCTCCGATCCTA
AGGCTGGTGTTCCGATTTATAAGCCCAAAACCTACGAGGTGTTAGTCTCCGATGCTGCGAATTCTCTTGCTTATGCTCTGGAAGATGGAAAGATGCGCTTGGAGATTGAT
TTCCCACCCCTGCCTAGCAACATTTCTTCGTATAAGGGATCTTCAGATGAGTTCATTGATGCAAATATTCAACTGGCCCTGGCTGTTGCAAGGAATCTTCAAGAAAAGAG
AGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGGAGAGCTTCAGAGTTGTTCAAAACAGCTATTGACTCGATCGATGGTATAACTGTAAGTTCTCTGG
ACGATGTTCCTGCTGGACCTGTCACATCTTTCTTCAGATCTGTTAGAAACACCCTTGATTTTGATTTTGAAGACGACAATGCAGGTCGTTGGACATCTAGTGACCCTCCA
TCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCGTCAATCCCCACCCTGTTGTTTAATCTAGAACTTGA
AACCTTGCGTGCGGACTTGGGCTTACTGGGATTTCCCCCCAAAGATTTGCATTATCGATTTCTCTCTCAGTTTATCCCAGTGTTCTACATTCGAATCAGAGAGTATTCTA
AGACAGTAGCAGTAGCACCTTATATTGTTAATTACAGTGGAGCATTGTTTCGTCAATACCCCGGACCTTGGCAAGTGATGCTGAAACAATCTGATAATTCTTATGCCTGC
GTTGCAGAGAGTGAAACAAGGTTCACCCTTGGTGAAACCAAAGATGAACTACTGAGGGTCCTTGGACTACAGGAGGAGCAAGGAAGCTCACTAGAATTTCTCCGCAGGGG
CTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGATTCTGAAGTATCTTCCGCATGGCGTAGTTGA

mRNA sequence

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TTGAAGGGGCTAATACGAATATTCAAGAAGATAGAGGACTCGCGGGAAAATCATAAAGTGGTGTCTTCAAGTTCGTTATCGTCTCATCCAAACGACCGGCTCTCTTTTCC
CCGGCGACTGAACTTCCACTGACAACTTCAGAGAGCTTAGCCATGCCGATCATGGCGTTTATCTCTTCACCACCCTACATTCCCTCTCTTTCTCGACCGTTTCAGAGCAA
CTTTCTCTTTTCTCCCATTTCCTCTTCCTTACGGCGTTCTACTCCATCCAGTTTATTTGGCGCTCAAACTTTGGCGGCTTCCGGATTTTGCTTTAGAATACACTGTCGTG
ACAAAGAACGAGCTGCACCGGTTACTCAGAGCTCCGATCCTAAGGCTGGTGTTCCGATTTATAAGCCCAAAACCTACGAGGTGTTAGTCTCCGATGCTGCGAATTCTCTT
GCTTATGCTCTGGAAGATGGAAAGATGCGCTTGGAGATTGATTTCCCACCCCTGCCTAGCAACATTTCTTCGTATAAGGGATCTTCAGATGAGTTCATTGATGCAAATAT
TCAACTGGCCCTGGCTGTTGCAAGGAATCTTCAAGAAAAGAGAGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGGAGAGCTTCAGAGTTGTTCAAAA
CAGCTATTGACTCGATCGATGGTATAACTGTAAGTTCTCTGGACGATGTTCCTGCTGGACCTGTCACATCTTTCTTCAGATCTGTTAGAAACACCCTTGATTTTGATTTT
GAAGACGACAATGCAGGTCGTTGGACATCTAGTGACCCTCCATCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGAAACTTT
TGCTTCGTCAATCCCCACCCTGTTGTTTAATCTAGAACTTGAAACCTTGCGTGCGGACTTGGGCTTACTGGGATTTCCCCCCAAAGATTTGCATTATCGATTTCTCTCTC
AGTTTATCCCAGTGTTCTACATTCGAATCAGAGAGTATTCTAAGACAGTAGCAGTAGCACCTTATATTGTTAATTACAGTGGAGCATTGTTTCGTCAATACCCCGGACCT
TGGCAAGTGATGCTGAAACAATCTGATAATTCTTATGCCTGCGTTGCAGAGAGTGAAACAAGGTTCACCCTTGGTGAAACCAAAGATGAACTACTGAGGGTCCTTGGACT
ACAGGAGGAGCAAGGAAGCTCACTAGAATTTCTCCGCAGGGGCTACAAGGCTGCCACTTGGTGGGAAGAAGATGTTGATTCTGAAGTATCTTCCGCATGGCGTAGTTGAG
CAGTACGAGTGTCGCAATTATTTCCTCCTCACATTTTCATGGACACAACATCGACGACATTGGACTCCCATTTCAAACGGATGGCTTCTTTCTTAAAGACTCTCATGGCT
CTCTTAGAACGGTTACTGCAGGGAAATTGTATCAGCTCTTTCAACCCACCAACTTCAGAAGATTGACACAGACTTCAATCCAACTCATTCACCTCTGGAGTTCGAGGTGA
AGTAGTCTTGTACATTTTATAAGTCCCAATAAATTACGATGTGTTGTTCATCCTTGATTCCGAGTTTCGTTTTCCTTTTTTCACTCATGTTCCTTCAAAAAGTATAAATC
AGGCATCTCACATGATTTGATCATTGTCTAGAATGAAGTTTAACTATTTCCATGCATTATGTGGTTCATAGATTCACTGATTGCACCCTTTCATTATCTTTTGTAATATA
AAAACGAAAATATTATCGAGTTCCTCCTCCATTCGTTGTTTAGCTCCTCCATTCGTTGTTTAGGG

Protein sequence

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MPIMAFISSPPYIPSLSRPFQSNFLFSPISSSLRRSTPSSLFGAQTLAASGFCFRIHCRDKERAAPVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEID
FPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTAIDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDDNAGRWTSSDPP
SLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAVAPYIVNYSGALFRQYPGPWQVMLKQSDNSYAC
VAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

Cmc01g0033201 (gene) of Melon (Charmono) v1.1 genome