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Cmc01g0033451 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0033451
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionserine-rich protein-related
Genome locationCMiso1.1chr01:33538692..33541146
RNA-Seq ExpressionCmc01g0033451
SyntenyCmc01g0033451
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058731.1 uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa]1.9e-5299.04Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
        M NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR

Query:  LAVS
        LAVS
Subjt:  LAVS

KAG6593379.1 hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2569.52Show/hide
Query:  MPNKTA-SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDP
        M NKTA SS RLCLCAPTTHPGSFRCSLHRR   +S+K P PLPPP G+QSKA + T     +KAFLMQ++KPSS  LQRR NFQPKPSRFCN  +A D 
Subjt:  MPNKTA-SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDP

Query:  RLAVS
         LAVS
Subjt:  RLAVS

KAG7025727.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-2570.83Show/hide
Query:  MPNKTA-SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVS
        M NKTA SS RLCLCAPTTHPGSFRCSLHRR   +S+K P PLPPP G+QSKA + T     +KAFLMQ++KPSS  LQRR NFQPKPSRFCN  S
Subjt:  MPNKTA-SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVS

KGN45240.1 hypothetical protein Csa_016736 [Cucumis sativus]1.4e-4286.79Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPP--PHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPD
        MPNKTASSSRLCLCAPTTHPGSFRCSLHRR SNSSHKTP PLPP  P GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRRG+F+PKPSRFC++VSA D
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPP--PHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPD

Query:  PRLAVS
        PRLAVS
Subjt:  PRLAVS

XP_008461151.1 PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo]2.2e-53100Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
        MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR

Query:  LAVS
        LAVS
Subjt:  LAVS

TrEMBL top hitse value%identityAlignment
A0A061G8R4 Uncharacterized protein6.2e-1755.79Show/hide
Query:  SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAA-----TTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSA
        SS+R CLC+PTTHPGSFRCS HR    +S K+    P  +  +SKAA     TT +    +KAFLMQI+KPSSH LQRR NFQ KP+RFC + S+
Subjt:  SSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAA-----TTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSA

A0A0A0K698 Uncharacterized protein6.6e-4386.79Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPP--PHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPD
        MPNKTASSSRLCLCAPTTHPGSFRCSLHRR SNSSHKTP PLPP  P GSQSKAA TTTDH+ LKAFLMQIVKPSSH LQRRG+F+PKPSRFC++VSA D
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPP--PHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPD

Query:  PRLAVS
        PRLAVS
Subjt:  PRLAVS

A0A1S3CEH6 uncharacterized protein LOC1034998221.1e-53100Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
        MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR

Query:  LAVS
        LAVS
Subjt:  LAVS

A0A5A7UZ19 Uncharacterized protein9.2e-5399.04Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
        M NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPR

Query:  LAVS
        LAVS
Subjt:  LAVS

A0A6J1DD51 uncharacterized protein LOC1110193813.2e-2162.77Show/hide
Query:  TASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHY---FLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVS
        +AS+SRLCLCAPTTHPGSFRCSLHRRP  +S K          S++ AA+   D      +KAFLMQI+KPSSH LQRR NFQPKPSRFCN+ S
Subjt:  TASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHY---FLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein1.1e-0547.37Show/hide
Query:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKT
        +  +T+ +  +C+C+PTTHPGSF+C LHR PS   +K+
Subjt:  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKT

AT5G11090.1 serine-rich protein-related3.5e-1233.04Show/hide
Query:  PNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNF
        P+     SR C+C+PTTHPGSFRCSLH+  +N           PHG  + + TT                    +  +++  L  +++PSSH L+RR  +
Subjt:  PNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNF

Query:  QPKPSRFCNIVSAPD
        QP+PSR   +  A +
Subjt:  QPKPSRFCNIVSAPD

AT5G20370.1 serine-rich protein-related1.7e-0632.38Show/hide
Query:  SSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPH----------------------GSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQP
        + R CLC+PTTHPGSFRCS HRR  +   KT                               S +K  +   +  F ++    + KPSS    RR  F+P
Subjt:  SSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPH----------------------GSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQP

Query:  KPSRF
        + SRF
Subjt:  KPSRF

AT5G25280.1 serine-rich protein-related1.0e-1132.46Show/hide
Query:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNFQ
        +K   S R C+C+PTTHPGSFRCSLH+  +N           PHG  + + TT                    +  +++  L  +++PSSH L+RR  ++
Subjt:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNFQ

Query:  PKPSRFCNIVSAPD
        P+ SR  ++  A D
Subjt:  PKPSRFCNIVSAPD

AT5G25280.2 serine-rich protein-related1.0e-1132.46Show/hide
Query:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNFQ
        +K   S R C+C+PTTHPGSFRCSLH+  +N           PHG  + + TT                    +  +++  L  +++PSSH L+RR  ++
Subjt:  NKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTT------------------TDHYFLKAFLMQIVKPSSHGLQRRGNFQ

Query:  PKPSRFCNIVSAPD
        P+ SR  ++  A D
Subjt:  PKPSRFCNIVSAPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAACAAAACCGCTTCCTCTTCCCGCCTTTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGTCCCTCGAATTCCTCC
CACAAGACGCCGCAGCCGCTGCCTCCTCCGCATGGAAGCCAATCGAAGGCGGCAACGACGACGACGGATCATTATTTCCTTAAGGCGTTTCTGATGCAGATCGTA
AAGCCGTCGAGTCATGGTCTTCAAAGACGGGGAAATTTCCAGCCTAAACCTTCTCGATTCTGCAATATCGTCTCCGCTCCGGATCCTCGTTTGGCTGTTTCATGA
mRNA sequenceShow/hide mRNA sequence
TCACTCACTCAATTCTCACATGCAAATTAAGGCTATAACTTCCCGTTTCCAATGCCGAACAAAACCGCTTCCTCTTCCCGCCTTTGCCTCTGTGCTCCGACCACC
CATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGTCCCTCGAATTCCTCCCACAAGACGCCGCAGCCGCTGCCTCCTCCGCATGGAAGCCAATCGAAGGCGGCA
ACGACGACGACGGATCATTATTTCCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGGTCTTCAAAGACGGGGAAATTTCCAGCCTAAACCTTCT
CGATTCTGCAATATCGTCTCCGCTCCGGATCCTCGTTTGGCTGTTTCATGATCGTGAATCGCGTACGTATGCATACATATGTGATTCATGGTTTTTGAAATTCTT
TATCGATCATTTCTGTTTTTGCGGATGGAATTTAGTGTGTGTTGTGTACAGGGGAACGTGAAATTGAAAACGTGATTAAGCGTTTCTGATCTTCGTTTTGAGATT
AATTTATGGAATTGTTAGGGCTTTTGAACTGAAATTGTGTAGTTTGTATATAATTGGAGGATTAGCAGACTGATCTTGTAAATAGTGAGAAAACTACAACTTTTA
TGAAACATAAAATAGTTTCAAATATTGATTGGAGAAGAAATTATTGAACTTTTGGTTAAAAAGGAAATCTTACGATATTACCCATTGTGTATGAATTAGTTTCGA
TAATTTAATGACATCAAATAGATTAATTAGTTTCAATTCAAATTATCACTCTGCCATTTTTGAAAGCTCCTCTTGATCATAATCACAATTTAAACTATCACTCTG
CCATTTTAAAAGTTTTGAAGTTTTTAAAACTTAAAAGCCTATAAACAGTACTTTTAATATTGGTTTTTATGTTTCAAACATTGAAAAATGTACTAGTTTTATTGT
CTTTCATTTTAGTAATAATTTTAAAATTCAAGTCAAAGTTTTGAAAAGTTTAAGCTAAAGTCAAATAATTAACTTCAATTTCCATTATTTGTTTAGTCTTATCTA
GTCCGTTAGTCTTTTCTCTAAACGAAGATACAATGGTCAATTGTTTAGTCTTATCAACTCGAATAGCTCGAGGTTTGTTTCCTTCGTCCACGGATTAATTACAAT
ACTTTTGTCGCCTCCACCGCCGGAAGAGCTTATGGACGAAAATGGGGAGAAGAAACCCGATTCTTTCTCCAAATTTCTTGCGGTGAGGGTTACAGCGCCACCCAT
TGTGTTCGATGATACGCCCTCTTCTCTTTCACATCCGCCGCATCTCCACCCCTGTGCGAGATGCTGTTTCTTGGGTATTTGAGCAAAATGGTAAAAGCATTGAAG
CTTTGGAGTTGTTTGCTGAACTCCATTGATCAGGAGCTGTTGTACCAAATCTTTCAAGCTTCACTTTGCCCTCTTTGCTTGTTCAAATGTTGGATTGGTTAAGGT
TGGTATGCAGATTACGTTCTCTCTCCATCAAAATGAGGCGTCGGTTTTTAATTTATTTGTGGGAAATGGATTAATATCAATGTATGCAAAATGTAATGCCATAAA
TGATGAAGAATAAAGATACTGTAACTTTGGAACTCTCTTATCTGTGGTTTTGTGGAGAACATTTTGGATGATGCACAGAAAACTTTTGAAAGGATGCCAGAATGT
GATGTTGTGTCTTGGACTACCATTATATCAGCGCTTATGGACAAGCCAAGCGTGTTCGGTGACATGCTTTCGAATCACCGATTTCCCCCCTCCTTTCTGCATGAG
CATCCCTTGGAACTACTAACAGCTTGGGGATGAAAGACAAGGGAGGCACTTCTTGTACCATCTTCTTGGCAGAGCAGGAAATCTTTCTGATGCTGAAGCTCTAAT
TGAAGCCATGCCGGTTAATCGGGATTGTGTTATATGGGAGGCACTTCTTGGTGCTCGTAGGATCGTAATTTAGAACTTGCACAAAAGGTTGCACAAAAGCTACTT
TCCCTAGGAACCGATAGACCTGGAACGTATGTTGTATTGTCTAATGTATATGCATGTAAAGGTCTGTCGGAGAAGGTTTCGGATGAAGTGCAGGTACACTATCTT
CTTACCAAGGACGATTCTCATGACAAGATTGAAGAGATCCATTCCTGCTTGAAGGTGTTGTTAAAATATCTCACCATGGCAGGTTATGTGCCAGATACAAATTTT
ATGCTCCATAATGTGGAAGAAGAACAAAAACAAAAATGAGCTTCTGTACCATAGTGAGAAGCTTGCCGTTGCTTATGCCATCTTAACCCGGCCGCTGGCAATGAG
TCCGTCGACAGATTAACGTATATTTCAACTCTGTGGAACTATCCTCTGTTCTATGCATCGAGAACTCAAATAATCACACCAATGATGAAGTTTTTGAGACACGGA
CCGAGAACAACACACGTAGAGGAATTGAGTATTTTTTTTT
Protein sequenceShow/hide protein sequence
MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS