; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0033961 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0033961
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionZinc finger CCCH domain-containing protein 39-like
Genome locationCMiso1.1chr01:33764028..33766448
RNA-Seq ExpressionCmc01g0033961
SyntenyCmc01g0033961
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135841.1 zinc finger CCCH domain-containing protein 39 isoform X1 [Cucumis sativus]2.0e-14990.85Show/hide
Query:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD
        MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYR TMSG VSSWRMPSNFGIPPWNNWNIGYEHE GRSY PGFNDT RMLPS PGIEF EGQLSERWNVD+
Subjt:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD

Query:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCP
        SNEMKVCRLFQRRKKCAYGDQCRFLHEIP+KTRDSGSSSQNYEV          R SGFDQLEEVRSKVQTKVVVRGEIPKPLI K RPCYPWQTTGRCP
Subjt:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCP

Query:  YGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
        YGAGCRFAHGEAELQKLEPC+ASQRGSVGGVS TATTTA VEAGLRSS+EIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Subjt:  YGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED

XP_008461087.1 PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo]3.5e-162100Show/hide
Query:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD
        MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD
Subjt:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD

Query:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHG
        SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHG
Subjt:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHG

Query:  EAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
        EAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Subjt:  EAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED

XP_011659534.1 uncharacterized protein LOC101205166 isoform X2 [Cucumis sativus]4.0e-11088.07Show/hide
Query:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD
        MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYR TMSG VSSWRMPSNFGIPPWNNWNIGYEHE GRSY PGFNDT RMLPS PGIEF EGQLSERWNVD+
Subjt:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD

Query:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCP
        SNEMKVCRLFQRRKKCAYGDQCRFLHEIP+KTRDSGSSSQNYEV          R SGFDQLEEVRSKVQTKVVVRGEIPKPLI K RPCYPWQTTGRCP
Subjt:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCP

Query:  YGAGCRFAHGEAELQKLE
        YGAGCRFAHGEAE +  E
Subjt:  YGAGCRFAHGEAELQKLE

XP_038897168.1 zinc finger CCCH domain-containing protein 39-like isoform X1 [Benincasa hispida]3.2e-12379.31Show/hide
Query:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHE--LGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNV
        MSAPNRFVPEARG+W  L PPYPD R QSF++ TMS  VSSW MPSN  IPPWNN N+GY+HE  LGR Y PGFNDTHR LPS PGIEFHEGQLSER  V
Subjt:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHE--LGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNV

Query:  D----DSNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQ
        D     SNEMKVCR FQRR+KCAYGDQCRFLHEIPEKTR+ GSSSQNYEV          RRSGFDQLEEVRSKVQTK+VVRGEIPKPLI K RPCYPWQ
Subjt:  D----DSNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQ

Query:  TTGRCPYGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
        TTGRCPYGAGCRFAHGEAELQK EPCSA+QRGSVGG S T +T    EAGLRSS  IGTDCKNKGPR+NQFFESKESKKLIGIYADWLED
Subjt:  TTGRCPYGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED

XP_038897171.1 zinc finger CCCH domain-containing protein 12-like isoform X2 [Benincasa hispida]1.3e-8978.44Show/hide
Query:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHE--LGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNV
        MSAPNRFVPEARG+W  L PPYPD R QSF++ TMS  VSSW MPSN  IPPWNN N+GY+HE  LGR Y PGFNDTHR LPS PGIEFHEGQLSER  V
Subjt:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHE--LGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNV

Query:  D----DSNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQ
        D     SNEMKVCR FQRR+KCAYGDQCRFLHEIPEKTR+ GSSSQNYEV          RRSGFDQLEEVRSKVQTK+VVRGEIPKPLI K RPCYPWQ
Subjt:  D----DSNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQ

Query:  TTGRCPYGAGCRFAHGEA
        TTGRCPYGAGCRFAHGEA
Subjt:  TTGRCPYGAGCRFAHGEA

TrEMBL top hitse value%identityAlignment
A0A0A0KBW4 Uncharacterized protein9.5e-15090.85Show/hide
Query:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD
        MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYR TMSG VSSWRMPSNFGIPPWNNWNIGYEHE GRSY PGFNDT RMLPS PGIEF EGQLSERWNVD+
Subjt:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD

Query:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCP
        SNEMKVCRLFQRRKKCAYGDQCRFLHEIP+KTRDSGSSSQNYEV          R SGFDQLEEVRSKVQTKVVVRGEIPKPLI K RPCYPWQTTGRCP
Subjt:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCP

Query:  YGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
        YGAGCRFAHGEAELQKLEPC+ASQRGSVGGVS TATTTA VEAGLRSS+EIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Subjt:  YGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED

A0A1S4E329 zinc finger CCCH domain-containing protein 39-like1.7e-162100Show/hide
Query:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD
        MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD
Subjt:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD

Query:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHG
        SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHG
Subjt:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHG

Query:  EAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
        EAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Subjt:  EAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED

A0A5A7UUP3 Zinc finger CCCH domain-containing protein 39-like1.7e-162100Show/hide
Query:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD
        MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD
Subjt:  MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDD

Query:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHG
        SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHG
Subjt:  SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHG

Query:  EAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
        EAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Subjt:  EAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED

A0A6J1HGS0 zinc finger CCCH domain-containing protein 39-like2.3e-7962.02Show/hide
Query:  EARGNW-PLLPPPYPD----PRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIG-YEHELGRSYRPGFND-THRMLPSRPGIEFHEGQLSERWNVDD--
        EARG W PL PPP P      R  SFY+ TMS  V S  MPSNF IP WNN +IG +++EL   Y    ND T   LPS  GIEFHE +L E   V+   
Subjt:  EARGNW-PLLPPPYPD----PRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIG-YEHELGRSYRPGFND-THRMLPSRPGIEFHEGQLSERWNVDD--

Query:  --SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVR----------RSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGR
          S EMKVCR FQRR KCAYGDQCRFLH+IPE T+D GSSSQN+EVR          +S FDQ EEVRSKVQTK+V R EIP P+  K R CY WQTTG 
Subjt:  --SNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVR----------RSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGR

Query:  CPYGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKG-PRINQFFESKESKKLIGIYADWLED
        C YG  CRFAHGEAELQKLE CS S+RG VGG  A+ATT A   AGLR S+ IGTDCKNKG  R+ Q F+SKE KKLIGIYADWLE+
Subjt:  CPYGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKG-PRINQFFESKESKKLIGIYADWLED

A0A6J1JNJ8 zinc finger CCCH domain-containing protein 39-like isoform X11.0e-7959.79Show/hide
Query:  MSAPNRF------VPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSE
        MSA  RF      VPEARG+   LPPP+ D              +    MPS   IPP NN NIGY+HELG    P  NDTHR LPS  GIEFHEGQLS 
Subjt:  MSAPNRF------VPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSE

Query:  RWNVDDSNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQ
        R     SNEMK CR FQRR+KCAYGDQCR+LHEIPEKTRD GS++QNYEV          RR G DQLEEVRSKVQT++VVRGEIPKP+  K R CYP Q
Subjt:  RWNVDDSNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQ

Query:  TTGRCPYGAGCRFAHGEAELQKLEP-CSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
         TG CPYGA CR AH EAELQKL P  +ASQRGSV   SAT +    V        EIG  CKN+ PR+ QFF+SK+SK+LI IYADWLED
Subjt:  TTGRCPYGAGCRFAHGEAELQKLEP-CSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED

SwissProt top hitse value%identityAlignment
Q5PP65 Zinc finger CCCH domain-containing protein 281.3e-0527.87Show/hide
Query:  KVCRLFQRRKKCAY-GDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIG---KPRPCYPWQTTGRCPYGAGCRFAHG
        K+C  F R   C Y    C F H   E+ R       N++       +    R      +  RG + + L     K R C  WQTTG CP+G+ C FAHG
Subjt:  KVCRLFQRRKKCAY-GDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIG---KPRPCYPWQTTGRCPYGAGCRFAHG

Query:  EAELQKLEPCSASQRGSVGGVSATA---------TTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
         +EL             + G SAT          T T+ V  G+ SS+   +    K   +    + K   K+  +Y DW++D
Subjt:  EAELQKLEPCSASQRGSVGGVSATA---------TTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED

Q84UQ3 Zinc finger CCCH domain-containing protein 563.8e-1027.75Show/hide
Query:  CRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFD---QLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHGEAE
        C+ F   + C YGD C FLH+   K R+S + S +  V   G           +   +     G + KP   K R C  W+ TG CP+G+ C FAHG AE
Subjt:  CRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFD---QLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHGEAE

Query:  LQK-----LEPCSASQRGSVGGVSATATTTAPVEAGLRSSK--------EIGTDCKNK---GPRINQ----FFESKESKKLIGIYADWLED
        L K     ++  S     +     A  +  AP E    S+          +G   +     G R  Q      + K   K+  IY DW+++
Subjt:  LQK-----LEPCSASQRGSVGGVSATATTTAPVEAGLRSSK--------EIGTDCKNK---GPRINQ----FFESKESKKLIGIYADWLED

Q9LQM3 Zinc finger CCCH domain-containing protein 122.4e-0928.78Show/hide
Query:  CRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSS---QNYEVRRSGFDQLEEV-RSKVQTKVVVRG-----------EIPKPLIGKPRPCYPWQTTGRCPY
        C+ F   + C YG+ C FLH+   + R+S + S     Y     G      V      + VVV G           +I KP   K R C  W+ TG CP+
Subjt:  CRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSS---QNYEVRRSGFDQLEEV-RSKVQTKVVVRG-----------EIPKPLIGKPRPCYPWQTTGRCPY

Query:  GAGCRFAHGEAELQKLEPCSASQRGSVG---------------GVSATATTTAP-VEAGLRSSKEIG------TDCKNKGPRINQFFESKESKKLIGIYA
        GA C FAHG AEL +       + G  G               G+S T T  +P V     +S   G      +    + P I    + K   K+  IY 
Subjt:  GAGCRFAHGEAELQKLEPCSASQRGSVG---------------GVSATATTTAP-VEAGLRSSKEIG------TDCKNKGPRINQFFESKESKKLIGIYA

Query:  DWLED
        DW++D
Subjt:  DWLED

Q9LT81 Zinc finger CCCH domain-containing protein 395.6e-1431.22Show/hide
Query:  MKVCRLFQRRKKCAYGDQCRFLHEIPEKTR-DSGS--SSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKP-----------LIGKPRPCYPWQTTGRC
        MK+CR F   ++C YGD+C F+HE   K R DSG    S    V  +  DQ  +  S +  +V  +G IP P           +  K R C  +  TG+C
Subjt:  MKVCRLFQRRKKCAYGDQCRFLHEIPEKTR-DSGS--SSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKP-----------LIGKPRPCYPWQTTGRC

Query:  PYGAGCRFAHGEAEL-QKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTD---CKNKGPRINQFFESKESKKLIGIYADWLED
        P+G  C FAHG+AEL   +         +V  V+  A   A     ++   ++  D      +G R     +  +SKK+  IY DW++D
Subjt:  PYGAGCRFAHGEAEL-QKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTD---CKNKGPRINQFFESKESKKLIGIYADWLED

Arabidopsis top hitse value%identityAlignment
AT1G32360.1 Zinc finger (CCCH-type) family protein1.7e-1028.78Show/hide
Query:  CRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSS---QNYEVRRSGFDQLEEV-RSKVQTKVVVRG-----------EIPKPLIGKPRPCYPWQTTGRCPY
        C+ F   + C YG+ C FLH+   + R+S + S     Y     G      V      + VVV G           +I KP   K R C  W+ TG CP+
Subjt:  CRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSS---QNYEVRRSGFDQLEEV-RSKVQTKVVVRG-----------EIPKPLIGKPRPCYPWQTTGRCPY

Query:  GAGCRFAHGEAELQKLEPCSASQRGSVG---------------GVSATATTTAP-VEAGLRSSKEIG------TDCKNKGPRINQFFESKESKKLIGIYA
        GA C FAHG AEL +       + G  G               G+S T T  +P V     +S   G      +    + P I    + K   K+  IY 
Subjt:  GAGCRFAHGEAELQKLEPCSASQRGSVG---------------GVSATATTTAP-VEAGLRSSKEIG------TDCKNKGPRINQFFESKESKKLIGIYA

Query:  DWLED
        DW++D
Subjt:  DWLED

AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein8.9e-0727.87Show/hide
Query:  KVCRLFQRRKKCAY-GDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIG---KPRPCYPWQTTGRCPYGAGCRFAHG
        K+C  F R   C Y    C F H   E+ R       N++       +    R      +  RG + + L     K R C  WQTTG CP+G+ C FAHG
Subjt:  KVCRLFQRRKKCAY-GDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIG---KPRPCYPWQTTGRCPYGAGCRFAHG

Query:  EAELQKLEPCSASQRGSVGGVSATA---------TTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
         +EL             + G SAT          T T+ V  G+ SS+   +    K   +    + K   K+  +Y DW++D
Subjt:  EAELQKLEPCSASQRGSVGGVSATA---------TTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED

AT3G19360.1 Zinc finger (CCCH-type) family protein4.0e-1531.22Show/hide
Query:  MKVCRLFQRRKKCAYGDQCRFLHEIPEKTR-DSGS--SSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKP-----------LIGKPRPCYPWQTTGRC
        MK+CR F   ++C YGD+C F+HE   K R DSG    S    V  +  DQ  +  S +  +V  +G IP P           +  K R C  +  TG+C
Subjt:  MKVCRLFQRRKKCAYGDQCRFLHEIPEKTR-DSGS--SSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKP-----------LIGKPRPCYPWQTTGRC

Query:  PYGAGCRFAHGEAEL-QKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTD---CKNKGPRINQFFESKESKKLIGIYADWLED
        P+G  C FAHG+AEL   +         +V  V+  A   A     ++   ++  D      +G R     +  +SKK+  IY DW++D
Subjt:  PYGAGCRFAHGEAEL-QKLEPCSASQRGSVGGVSATATTTAPVEAGLRSSKEIGTD---CKNKGPRINQFFESKESKKLIGIYADWLED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCTCCTAATCGGTTTGTCCCTGAGGCTCGTGGCAATTGGCCGCTATTGCCTCCTCCGTATCCTGATCCAAGAAACCAATCATTCTATCGGTCTACGATG
TCTGGAGCTGTTAGTAGTTGGAGAATGCCTTCAAATTTTGGGATTCCACCATGGAACAATTGGAACATTGGGTATGAACATGAGTTGGGGCGTTCATATAGACCT
GGTTTTAATGATACTCACAGAATGCTACCTTCCAGACCTGGAATTGAATTCCATGAAGGTCAATTATCAGAGCGTTGGAATGTTGATGACTCGAATGAAATGAAA
GTGTGCAGACTGTTCCAACGCCGGAAGAAATGTGCATATGGGGATCAGTGTCGTTTCCTTCATGAAATTCCTGAGAAAACTAGGGATTCTGGCTCCTCCAGCCAA
AATTATGAGGTTAGAAGAAGTGGGTTCGATCAATTGGAAGAAGTTCGATCAAAAGTACAAACGAAGGTGGTTGTCCGTGGTGAGATTCCAAAGCCTTTAATTGGC
AAACCAAGGCCCTGTTACCCCTGGCAGACCACTGGTCGCTGTCCATATGGGGCCGGTTGTCGCTTTGCCCATGGAGAAGCAGAACTACAGAAGCTTGAGCCCTGT
AGTGCATCACAACGTGGGAGCGTAGGTGGTGTCTCTGCGACTGCAACAACGACTGCTCCTGTCGAAGCTGGATTAAGGAGCAGCAAGGAAATTGGAACCGACTGT
AAGAATAAAGGGCCGAGAATTAACCAATTCTTTGAATCAAAGGAGTCTAAGAAGTTGATTGGCATTTATGCCGACTGGCTCGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
TTGATATTTAGAAGATGAAAAGAGAAAAAAGAAATCCAAACAGTTCAAAAATTAGACCGCGAAACAAGTCAAGGGGGGGAAACGAAAGGACCCCCCGAAACCGAA
GCAGCCACCGCGATTTATGATCGGAACTCCACCGATGAATCTCGCGGCGGAGTTCATTTCATCTTCTCCCCTCAGTTCTCCAATGGACGGCTAGGGTTTTACTCT
CGTTTGCTCTATTGGAATTTCTTTTCGACGCTCTGCTTGCTTATTGGGCAAATTTTCATCAGAATCGTTCTGTTTTTCCGTTCAAAGAATTTGAATACTGAAATT
GGATGGTTTGGCCCTTGAAATGAGCGCTCCTAATCGGTTTGTCCCTGAGGCTCGTGGCAATTGGCCGCTATTGCCTCCTCCGTATCCTGATCCAAGAAACCAATC
ATTCTATCGGTCTACGATGTCTGGAGCTGTTAGTAGTTGGAGAATGCCTTCAAATTTTGGGATTCCACCATGGAACAATTGGAACATTGGGTATGAACATGAGTT
GGGGCGTTCATATAGACCTGGTTTTAATGATACTCACAGAATGCTACCTTCCAGACCTGGAATTGAATTCCATGAAGGTCAATTATCAGAGCGTTGGAATGTTGA
TGACTCGAATGAAATGAAAGTGTGCAGACTGTTCCAACGCCGGAAGAAATGTGCATATGGGGATCAGTGTCGTTTCCTTCATGAAATTCCTGAGAAAACTAGGGA
TTCTGGCTCCTCCAGCCAAAATTATGAGGTTAGAAGAAGTGGGTTCGATCAATTGGAAGAAGTTCGATCAAAAGTACAAACGAAGGTGGTTGTCCGTGGTGAGAT
TCCAAAGCCTTTAATTGGCAAACCAAGGCCCTGTTACCCCTGGCAGACCACTGGTCGCTGTCCATATGGGGCCGGTTGTCGCTTTGCCCATGGAGAAGCAGAACT
ACAGAAGCTTGAGCCCTGTAGTGCATCACAACGTGGGAGCGTAGGTGGTGTCTCTGCGACTGCAACAACGACTGCTCCTGTCGAAGCTGGATTAAGGAGCAGCAA
GGAAATTGGAACCGACTGTAAGAATAAAGGGCCGAGAATTAACCAATTCTTTGAATCAAAGGAGTCTAAGAAGTTGATTGGCATTTATGCCGACTGGCTCGAAGA
TTGAGTTTTCCGCATGGCTTGCAGTACAAAGATTTGACCAAATCCCGAGGCTTTTTCTAAATCTCATAAATTGGTTGAGAAAATGAAGGTTCTTCCTGAACTTCA
TAACTTCATATTGACATTGAATATAGCGTCTGGATAATAGATATCATTCTTCACAAGAATATGAAAATTTTCTGTCTTTTTTGTGTACGACTCTGGACTATAGTA
GCAAAGGGCAAGAATCAAGATGATTAGTAAGTTCATGGTATTCCATCTTTCAACTTGTTTAGTTTTACTTTTTGACAGATATAAAAGTAGTATGAAGATTCGAAC
TCTAAATGAAAACTGTTTCCCAC
Protein sequenceShow/hide protein sequence
MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGYEHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDDSNEMK
VCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRRSGFDQLEEVRSKVQTKVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPC
SASQRGSVGGVSATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED