; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0036451 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0036451
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationCMiso1.1chr01:35362353..35368896
RNA-Seq ExpressionCmc01g0036451
SyntenyCmc01g0036451
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059439.1 protein WHI4 [Cucumis melo var. makuwa]2.3e-147100Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_004141677.1 protein WHI4 [Cucumis sativus]2.8e-14598.85Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLYNQPDPTYS+RSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPA+AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_008462363.2 PREDICTED: LOW QUALITY PROTEIN: protein WHI4 [Cucumis melo]7.4e-14699.24Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKK  ANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_023513427.1 U2 small nuclear ribonucleoprotein B'' 2 [Cucurbita pepo subsp. pepo]2.2e-13792.75Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLY+QPD  YSDR+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKK+D+N+QETSS+DGGSEPDEPSKK +QSNEAVV P + +SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
         KYPGFNVLKLRAKSGMPVAFADFE+IEQASKVMEELQGS+LPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_038898771.1 protein WHI4 isoform X1 [Benincasa hispida]1.8e-14497.71Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKA+QS EA+VTPA+A+SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

TrEMBL top hitse value%identityAlignment
A0A0A0K772 Uncharacterized protein1.4e-14598.85Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLYNQPDPTYS+RSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPA+AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A1S3CHB2 LOW QUALITY PROTEIN: protein WHI43.6e-14699.24Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKK  ANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A5A7V0X3 Protein WHI41.1e-147100Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A6J1HI97 protein WHI42.3e-13792.37Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLY+QPD  YSDR+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKK+D+N+QETSS+DGGSEPDEPSKK +QSNEAVV P + +SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
         KYPGFNVLKLRAKSGMPVAFADFE+IEQASKV+EELQGS+LPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A6J1KI66 U2 small nuclear ribonucleoprotein B'' 28.9e-13792.37Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH  YDPYYLY+QPD  YSDR+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKPGGGAYVVIDKRKK+D+N+QETSS+DGGSEPDEPSKK +QSNEAVV P + +SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
         KYPGFNVLKLRAKSGMPVAFADFE+IEQASKVMEELQGS+LPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

SwissProt top hitse value%identityAlignment
Q6DH13 RNA-binding protein, mRNA-processing factor 2a3.5e-1338.54Show/hide
Query:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        ++ + + S    + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF +   A  A +ALNG++FDP+S   L +E A++N++
Subjt:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q93062 RNA-binding protein with multiple splicing1.7e-1237.5Show/hide
Query:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        N P         + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F +F +   A  A +ALNG++FDP+    L +E A++N++
Subjt:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q9W6I1 RNA-binding protein with multiple splicing 21.3e-1241.67Show/hide
Query:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF +   A  A +ALNG++FDP++   L +E A++N++
Subjt:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q9WVB0 RNA-binding protein with multiple splicing1.7e-1237.5Show/hide
Query:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        N P         + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F +F +   A  A +ALNG++FDP+    L +E A++N++
Subjt:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q9YGP5 RNA-binding protein with multiple splicing 23.5e-1342.86Show/hide
Query:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF N   A  A +ALNG++FDP++   L +E A++N++
Subjt:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-4038.72Show/hide
Query:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      +   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED
        LA+SN + K       +  + K K     S  T+++ G      P   +   N    +PA        A  AP          PC TLFIAN+GPNC E 
Subjt:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED

Query:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGG-MHIEYARSKM
        EL +V  +  GF  LK++   G PVAF DF+D+  +S+ +  LQG+VL SS  G  + ++YARS+M
Subjt:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGG-MHIEYARSKM

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-3838.58Show/hide
Query:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      +   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED
        LA+SN + K       +  + K K     S  T+++ G      P   +   N    +PA        A  AP          PC TLFIAN+GPNC E 
Subjt:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED

Query:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRG
        EL +V  +  GF  LK++   G PVAF DF+D+  +S+ +  LQG+VL SS  G
Subjt:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRG

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein4.9e-3938.2Show/hide
Query:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      +   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED
        LA+SN + K       +  + K K     S  T+++ G      P   +   N    +PA        A  AP          PC TLFIAN+GPNC E 
Subjt:  LARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNED

Query:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK
        EL +V  +  GF  LK++   G PVAF DF+D+  +S+ +  LQG+VL SS  G +    +R  MRK
Subjt:  ELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK

AT3G13700.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.8e-8056.31Show/hide
Query:  HHPYDPYYLY---NQPD------PTYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQ------------------VVAFATFYN
        H PYDP+Y+Y   + P       P  +D    INTLF+SGLP+DVKAREIHNLFRRR GF+SCQLKYTGRG+Q                  VVAFATF +
Subjt:  HHPYDPYYLY---NQPD------PTYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQ------------------VVAFATFYN

Query:  HQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDE---------PSKKAQQSNEAVVTPASAIS
        H+ A+ A++ LNGVKFDPQ+GS LHIELARSNSRRK +PG G YVVID R K  + SQ+  SD+G S+PDE         P +     +EA   P S   
Subjt:  HQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDE---------PSKKAQQSNEAVVTPASAIS

Query:  APYEHHEK-NDGG----PCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIE
        +   H EK ++GG     CSTLFIANLGPNC EDELK++L +YPGF++LK+RA+ GMPVAFADFE+IEQA+  M  LQG++L SSDRGGMHIE
Subjt:  APYEHHEK-NDGG----PCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIE

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.5e-8861.13Show/hide
Query:  HHPYDPYYLY---NQPD------PTYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDP
        H PYDP+Y+Y   + P       P  +D    INTLF+SGLP+DVKAREIHNLFRRR GF+SCQLKYTGRG+QVVAFATF +H+ A+ A++ LNGVKFDP
Subjt:  HHPYDPYYLY---NQPD------PTYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDP

Query:  QSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDE---------PSKKAQQSNEAVVTPASAISAPYEHHEK-NDGG----P
        Q+GS LHIELARSNSRRK +PG G YVVID R K  + SQ+  SD+G S+PDE         P +     +EA   P S   +   H EK ++GG     
Subjt:  QSGSVLHIELARSNSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDE---------PSKKAQQSNEAVVTPASAISAPYEHHEK-NDGG----P

Query:  CSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK
        CSTLFIANLGPNC EDELK++L +YPGF++LK+RA+ GMPVAFADFE+IEQA+  M  LQG++L SSDRGGMHIEYARSKMRK
Subjt:  CSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCACCATCCTTACGATCCTTACTATCTCTATAATCAACCGGACCCGACCTACAGTGACCGGAGCAACATCAACACGCTATTCATCTCTGGTCTCCCTGAC
GACGTCAAGGCGCGCGAGATTCACAACCTTTTCCGCCGCCGCCCGGGGTTCGACTCTTGCCAGCTCAAGTACACTGGACGAGGCAATCAGGTTGTGGCATTTGCC
ACTTTTTACAATCACCAATCGGCTGTGACAGCGCTTCATGCATTAAATGGTGTCAAATTTGATCCACAAAGTGGATCGGTTCTGCATATTGAACTTGCTAGGTCA
AACTCAAGGAGAAAACATAAGCCAGGTGGTGGAGCATATGTTGTGATAGATAAAAGGAAAAAAACCGATGCCAATTCTCAGGAAACATCAAGTGATGATGGAGGC
AGTGAACCGGATGAACCATCAAAAAAGGCCCAACAAAGCAACGAGGCAGTGGTTACTCCTGCTAGTGCTATATCTGCTCCATATGAGCATCATGAAAAGAATGAT
GGAGGACCATGCTCCACTTTGTTTATCGCAAATCTGGGTCCAAACTGCAATGAAGATGAACTGAAGGAAGTCTTGTGCAAATATCCTGGATTCAACGTTCTCAAA
TTGCGTGCCAAAAGTGGAATGCCCGTTGCATTTGCTGATTTTGAGGACATCGAACAAGCTAGCAAGGTTATGGAGGAGCTTCAGGGCAGTGTTCTACCATCATCC
GACCGTGGCGGCATGCATATAGAGTATGCTCGGTCTAAAATGAGGAAGTCTTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAGAATAAATAAAATGTTGGACACTTATTGCTAAATGTTTTAAATTACCAAACTACAATGTTTTCCTATATACGTATTTCCCGCTCGAGTCAGAAGGAAACA
CAAAACACAGTAGAACCCAAACTCCGCCGTGTTCGAAGTTAATTCCGGTACAGTTTTCACCAATCTTCGCCGTGAGTTCCACCGGCTAATTCGCCAATGGCTCAC
CATCCTTACGATCCTTACTATCTCTATAATCAACCGGACCCGACCTACAGTGACCGGAGCAACATCAACACGCTATTCATCTCTGGTCTCCCTGACGACGTCAAG
GCGCGCGAGATTCACAACCTTTTCCGCCGCCGCCCGGGGTTCGACTCTTGCCAGCTCAAGTACACTGGACGAGGCAATCAGGTTGTGGCATTTGCCACTTTTTAC
AATCACCAATCGGCTGTGACAGCGCTTCATGCATTAAATGGTGTCAAATTTGATCCACAAAGTGGATCGGTTCTGCATATTGAACTTGCTAGGTCAAACTCAAGG
AGAAAACATAAGCCAGGTGGTGGAGCATATGTTGTGATAGATAAAAGGAAAAAAACCGATGCCAATTCTCAGGAAACATCAAGTGATGATGGAGGCAGTGAACCG
GATGAACCATCAAAAAAGGCCCAACAAAGCAACGAGGCAGTGGTTACTCCTGCTAGTGCTATATCTGCTCCATATGAGCATCATGAAAAGAATGATGGAGGACCA
TGCTCCACTTTGTTTATCGCAAATCTGGGTCCAAACTGCAATGAAGATGAACTGAAGGAAGTCTTGTGCAAATATCCTGGATTCAACGTTCTCAAATTGCGTGCC
AAAAGTGGAATGCCCGTTGCATTTGCTGATTTTGAGGACATCGAACAAGCTAGCAAGGTTATGGAGGAGCTTCAGGGCAGTGTTCTACCATCATCCGACCGTGGC
GGCATGCATATAGAGTATGCTCGGTCTAAAATGAGGAAGTCTTAGCTGAAAAGCATTTTTCAGTCTGGTAGGGACTCGTTTGCTGCTACTCTGAAGTTATATTGC
ATTAATCAGTCTGGTATCATTTCCAGTGCTTGCAAACTACGCATCATATCACCGCCTAAATGAAAATAGATTATGTCATCATGCACATCTTAGTTAAATTATATA
GTAAAGTATTGTGTGCGTGTTTTTTTTTTAAGGAGGCTATTCCTATGTAGTAGTTAGTTAATCTCATAGTGGAAGCTTTCTAAGGAGAACCAGGATCTGACTTGA
GCTATCTTAGTTAAAAGGGAAAAAGGAAGGAAGAGAGGAAATTCTCGTGATGGATGAGAGGCAGTTCATTTGGTAGCGCAGTATATCAGATGTTGTGGCTCAATT
AAAATCCTATTGATTATTGGACTTTCAGTTGTTTGAATTTGGTTTTTGGCGACCATAAGAACAAGCAAAGCAACGATGGTCCCACTCTAAGCTAAAAGACAAACG
CTTCATACATACGTTTAAACACTAGGATGGATTGGACTTGTAGTATCTTTCATTCCACTCTTTGATGGAGGGGCTGATTTAGCCTCGTAGGAGGATGTAACTGGT
GATTAGATAGTAATCGGACAAATCATCTATATCAAACTACGGTTGAACTTTGTAGCATCTTTCTTTTACTCAATTGACAACACAACATCTATATCAAACTACAAC
AGAAGATTTTGTTTAAGTAATGATAAGACAACTAGTTAAGATATAGACCATTGATCAAAAGATTAGAAGTTTAAGTCTCTGTTCTCCTTAGTTGAACTCAAACTG
CCAAAGTTGGCCTATGAGTGAATGACATGCATCCGCATCTACTACATCACATTTAACTGAAAAGTTATGATCTACACAAATCAATAACTTCGTATTCACCTTATT
TCTTAATCTTTCTAGTTTTGTAAGGATTTGCATGTTTTCCATTTGGAAGTAGTTATTGTACGTCGTACCTTAATGAACGAATCTCACTGCAATACTCCGTTTTCA
ACAACCATGTCACAAACTTTCCTGTTAATGGAAAATTCGCATCTAGAATATGGATTCTACTAGGACATCCAAGGCTATTTAAGGACTTTCATCGTCTCCGCAAAG
AAATTCTTATACATCCTCATCAGGTAAATTCCTCACCAAATCTGTAGTCGTTTTTACATCCTCTTCCTAGGGCACTTGTTTCTGTTGGGGGCATTCACTCCTTGA
TTGGAGTTGGATTAACATAAGAATCACATATATCTTCCCTTTCTTTCCTCCGAATTCAACATGTAGACCATGGATTCACACCCTTTGGACCTTTATCGATAAAAC
AATGTCTTAACAAATTAAGTTATGTTGTCTTTCATTGCTGGAAACTGTAGGCAGTTTATACTTTTCTCCAGTAGGATTTCTTAGAGGATTGAGGATTAATAATAG
TAAATAATTGTTCCATTGTTTTTGGACCAAGTTGAACACCTCACAGTAATTGCCTCAAATTTCTCCTCCATTTTGTATTATGGGTTGTTTATAATAGCCAACTAC
CCCCTCCCATGCCCTGGTAATGATATTAATTTGTTGTCCCAAAAAGAAAAAGAAAATGTCGATATGAACTTCCTTTAATATAACTTTGCGACCATTGACCACCGA
CCACACATCTTGTTTATTTATTTCTATTTTTTTGGGTAAGAAATTGAGTTTCGATTAAGATTGGAGAACCTAAAAAAAACATCATCTTAAGGGGCATTGAAAATT
TCACATTGGAAAAACTAAGGAGCTTCAAATTCTTTATGGATAGATGGATTATTCTTTTCATTCTTGATTCATTTTGAGATGGATTCTCGTACTATTAACTATTTT
ATATTTTATTTTCTATTTAAGTGCTTATAAAAATTTAATAAAATACTGTTTTAGTTATATATAAAATCACTCTGCCTTTGGATGCCATCAGTTGATGGTTACATA
TAATAAAAACAAATTTATAATGCTAATTAGATGATTAAATACAATAGAAATCAAAATATCATTTTGGTCGCAACTAGACTTGTTCAATTTTAGTGTCAGTTTTAA
AGATTTAATTTGGTCTTTCAATAAAAGTTAAATTCAGACTTAAAGTTAGTTTTTAATAGAAAGTGATGAATAATATTTATAGGCATGAAAAAAAGAAAAAAGAAA
AAAAAAAAAGAAAAACAGTGAAATGCAAGTGGATAATTCTTTTTCTTATAGAAAACAATCGACAATAAATTAGCCAGATGAGTTAAATTTAAGATTGTCGAAGAT
ATATAGACTAGAGCTAGACATTTAAAATTGCAACAACTTTCAAAGCAAGCGATTTTAAAAGTATAGAGAAGTAAATAATAAAATATTTAAAAATATTTATAACAT
GTAGTAAAATTTTTATTTGTTATATTTTATAAATATTTTGATTTATTTTATTGTATTTGAAAATATCTTATTTTTAACTTAACATGTATTATTATTTTTTATCAT
TTGAGTGACTTTAGTTTAATGGTAGCTTATAGCTTTTTGTTTGAATAAATAAAAGCAATTATTAGCACATCAATTGCAAGCAGATTGATTTTCTCACATTAGACA
TTAATTATGTCAACCAATATATATATATATACACACACACACATACACACACCCGAAGAAAATGATCGTTTGGTTATTATATTATTAGTTATTTTGGAAGTATAT
GGTTAAATTTTTTTCTGTTTGTTTTTGGATTTATTTTGGTAAGGTTGGTATGACTGAAGTTGTTGATATGATAAGATTTATTTTTCAATTGGAATAAAGACAAAC
TTATTTGTGTGAATTCCTATTTTGCTCTTATTAAAAGACAATCAGTGTTGTACTCATTGTATATCTGAATGGTTCATTCCCTATGTTTCAACTCTTTGTGGTTGT
GATTTGTGAATTTTTTACTAAAGTTAACTCCTGATTTTATTGTTTTAAAGAGAACTATTGAAATTTTAGATAGAGATTGAGACTTTGAAACAGAGTTGGC
Protein sequenceShow/hide protein sequence
MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARS
NSRRKHKPGGGAYVVIDKRKKTDANSQETSSDDGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVLCKYPGFNVLK
LRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS