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Cmc02g0037791 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0037791
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGATA transcription factor 16-like
Genome locationCMiso1.1chr02:496386..496825
RNA-Seq ExpressionCmc02g0037791
SyntenyCmc02g0037791
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588601.1 GATA transcription factor 16, partial [Cucurbita argyrosperma subsp. sororia]8.3e-0963.83Show/hide
Query:  MGFVDLSQKGLLL------ADTKCCVDCKTTKTPLWRGGPTGPKKIC
        MG +D++QKGLLL         KCCVDC TTKTPLWRGGP GPK +C
Subjt:  MGFVDLSQKGLLL------ADTKCCVDCKTTKTPLWRGGPTGPKKIC
TYK10277.1 GATA transcription factor 16-like [Cucumis melo var. makuwa]4.6e-1597.5Show/hide
Query:  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKI
        MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK+I
Subjt:  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKI
XP_008450587.1 PREDICTED: GATA transcription factor 16-like [Cucumis melo]2.3e-2796.72Show/hide
Query:  MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKIC
        MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK +C
Subjt:  MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKIC
XP_011659732.1 GATA transcription factor 16 [Cucumis sativus]2.7e-1592.68Show/hide
Query:  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKIC
        MGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK +C
Subjt:  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKIC
XP_038880207.1 GATA transcription factor 17-like [Benincasa hispida]4.3e-2183.61Show/hide
Query:  MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKIC
        MIL SP LSLP SI FLN EMG +DL QKGLLLADTKCCVDCKTTKTPLWRGGPTGPK +C
Subjt:  MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKIC
TrEMBL top hitse value%identityAlignment
A0A0A0M1G9 GATA-type domain-containing protein1.3e-1592.68Show/hide
Query:  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKIC
        MGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK +C
Subjt:  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKIC
A0A1S3BQ71 GATA transcription factor 16-like1.1e-2796.72Show/hide
Query:  MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKIC
        MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK +C
Subjt:  MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKIC
A0A5D3CE96 GATA transcription factor 16-like2.2e-1597.5Show/hide
Query:  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKI
        MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK+I
Subjt:  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKI
A0A6J1F048 GATA transcription factor 16-like1.2e-0861.7Show/hide
Query:  MGFVDLSQKGLLL------ADTKCCVDCKTTKTPLWRGGPTGPKKIC
        MG ++++QKGLLL         KCCVDC TTKTPLWRGGP GPK +C
Subjt:  MGFVDLSQKGLLL------ADTKCCVDCKTTKTPLWRGGPTGPKKIC
A0A6J1JPG4 GATA transcription factor 16-like7.6e-0863.83Show/hide
Query:  MGFVDLSQKGL----LLAD--TKCCVDCKTTKTPLWRGGPTGPKKIC
        MG +D++QKGL     L D   KCCVDC TTKTPLWRGGP GPK +C
Subjt:  MGFVDLSQKGL----LLAD--TKCCVDCKTTKTPLWRGGPTGPKKIC
SwissProt top hitse value%identityAlignment
Q5HZ36 GATA transcription factor 215.8e-0568Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKKIC
        + C DC TTKTPLWR GP GPK +C
Subjt:  KCCVDCKTTKTPLWRGGPTGPKKIC
Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 12.0e-0556.41Show/hide
Query:  DLSQKGL--LLADTKCCVDCKTTKTPLWRGGPTGPKKIC
        D SQ+ L   L   + C DC TTKTPLWR GP GPK +C
Subjt:  DLSQKGL--LLADTKCCVDCKTTKTPLWRGGPTGPKKIC
Q8LC59 GATA transcription factor 232.1e-0776Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKKIC
        +CC +CKTTKTP+WRGGPTGPK +C
Subjt:  KCCVDCKTTKTPLWRGGPTGPKKIC
Q9FJ10 GATA transcription factor 161.2e-0572Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKKIC
        K C DC T+KTPLWRGGP GPK +C
Subjt:  KCCVDCKTTKTPLWRGGPTGPKKIC
Q9LIB5 GATA transcription factor 171.5e-0571.43Show/hide
Query:  DTK-CCVDCKTTKTPLWRGGPTGPKKIC
        DTK  CVDC T +TPLWRGGP GPK +C
Subjt:  DTK-CCVDCKTTKTPLWRGGPTGPKKIC
Arabidopsis top hitse value%identityAlignment
AT3G16870.1 GATA transcription factor 171.1e-0671.43Show/hide
Query:  DTK-CCVDCKTTKTPLWRGGPTGPKKIC
        DTK  CVDC T +TPLWRGGP GPK +C
Subjt:  DTK-CCVDCKTTKTPLWRGGPTGPKKIC
AT4G16141.1 GATA type zinc finger transcription factor family protein6.4e-0772Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKKIC
        K CVDC T++TPLWRGGP GPK +C
Subjt:  KCCVDCKTTKTPLWRGGPTGPKKIC
AT4G26150.1 cytokinin-responsive gata factor 14.1e-0668Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKKIC
        + C DC TTKTPLWR GP GPK +C
Subjt:  KCCVDCKTTKTPLWRGGPTGPKKIC
AT5G26930.1 GATA transcription factor 231.5e-0876Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKKIC
        +CC +CKTTKTP+WRGGPTGPK +C
Subjt:  KCCVDCKTTKTPLWRGGPTGPKKIC
AT5G49300.1 GATA transcription factor 168.3e-0772Show/hide
Query:  KCCVDCKTTKTPLWRGGPTGPKKIC
        K C DC T+KTPLWRGGP GPK +C
Subjt:  KCCVDCKTTKTPLWRGGPTGPKKIC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTATGTTCTCCCCTTCTCTCTCTTCCTCGTTCAATTTTCTTCCTAAATCCTGAAATGGGTTTCGTGGATTTAAGCCAAAAGGGACTTTTGCTGGCGGAT
ACTAAATGTTGTGTTGATTGTAAGACTACCAAAACTCCTTTGTGGCGTGGAGGCCCTACTGGACCTAAGAAGATTTGCCTTCTCCATTCCTTCTTCACTCTGTTC
TATTGTTTTCTTGTTTCATGTTTTCCATTTTGCTTTTGTTTGGTCTTGAGCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTTATGTTCTCCCCTTCTCTCTCTTCCTCGTTCAATTTTCTTCCTAAATCCTGAAATGGGTTTCGTGGATTTAAGCCAAAAGGGACTTTTGCTGGCGGAT
ACTAAATGTTGTGTTGATTGTAAGACTACCAAAACTCCTTTGTGGCGTGGAGGCCCTACTGGACCTAAGAAGATTTGCCTTCTCCATTCCTTCTTCACTCTGTTC
TATTGTTTTCTTGTTTCATGTTTTCCATTTTGCTTTTGTTTGGTCTTGAGCTTATGA
Protein sequenceShow/hide protein sequence
MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKKICLLHSFFTLFYCFLVSCFPFCFCLVLSL