| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032842.1 hypothetical protein E6C27_scaffold1987G00140 [Cucumis melo var. makuwa] | 1.8e-97 | 89.11 | Show/hide |
Query: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
+++GRLCIIICLYVDDMLIFGSNLHVINDVKSMLN NFDM+DLGEADVILGIKI R ENG LDQSHYIEK LKKYNYFDSKP CTPYDSSVKL KNTGD
Subjt: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
Query: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
SVNQSEYASIIGSLRYAADCTRPDIAY VGLLCRFTSRPSLEHWNA+ERVMRYLKK QNLGLHYNKFPAVLEGYNDAD NS D+S ATSGYIFNIAG
Subjt: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
Query: VA
VA
Subjt: VA
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| KAA0058878.1 putative polyprotein [Cucumis melo var. makuwa] | 2.2e-92 | 84.16 | Show/hide |
Query: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
+ KGRLCIIICLYVDDML F SNLHVINDVKSML+ NFDM+DLGEAD+ILGIKI R +NG LDQS+YIEK LKKYNYFDSKP CTPYDSSVKL KNTGD
Subjt: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
Query: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
+VNQSEY SIIGSLRY ADCTRPDIAY VGLLCRFTSRP LEHWNA+ER+MRYLKKTQNLGLHYNKF VLEGYND D NSL D+S ATSGYIFNIAGG
Subjt: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
Query: VA
VA
Subjt: VA
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| KAA0060459.1 hypothetical protein E6C27_scaffold22G002870 [Cucumis melo var. makuwa] | 2.3e-97 | 88.61 | Show/hide |
Query: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
+ +GRLCIIICLYVDDMLIFGSNLHVINDVKSML+ NFDM+DLGEADVILGIKI R ENG FLDQSHYIEK+LKKYNYFDSKP CTPYDSSVKL KNTGD
Subjt: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
Query: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
SVNQ+EYASIIGSLRYA D TRP IAY VGLLCRFTSRPSLEHWNA+ERVMRYLKKTQNLGLHYNKFP VLEGY+DAD NSLLD+S ATSGYIFNIAGGA
Subjt: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
Query: VA
VA
Subjt: VA
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| TYK00058.1 hypothetical protein E5676_scaffold596G00040 [Cucumis melo var. makuwa] | 2.5e-91 | 84.65 | Show/hide |
Query: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
+ +GR+CIIICLYVDDMLIFGSNLH+INDVKSML+ANFDM+DLGEADVILGIKI R ENG LDQSHYIEK LKKYNYF+SKP CTPYDSSVKL KNTGD
Subjt: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
Query: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
SVNQSEYASIIGSLRYAADCTRPDIAY +GLLCRFTSR SLEHWNA+ERVMRYLKKTQNLGLHYNKF VLEGY DAD NSL D+S A SGYIF I A
Subjt: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
Query: VA
VA
Subjt: VA
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| TYK06419.1 hypothetical protein E5676_scaffold163G001210 [Cucumis melo var. makuwa] | 2.0e-93 | 85.64 | Show/hide |
Query: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
+ +GRLCIIICLYVDD+LIFGSNL+VINDVKSML+ NFDM++L EADVILGIKI R +NG LDQSHYIEK LKKYNYFDSKP CTPYDSSVKL +NTGD
Subjt: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
Query: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
SVNQSEYASIIGSLRYAADCTRPDIAY VGLLCRFTSRPSLEHWN +ER++RYLKKTQNLGLHYNKFPAVLEGY DAD NSL D S ATSGYIFNIAGGA
Subjt: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
Query: VA
VA
Subjt: VA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNZ1 Reverse transcriptase Ty1/copia-type domain-containing protein | 8.5e-98 | 89.11 | Show/hide |
Query: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
+++GRLCIIICLYVDDMLIFGSNLHVINDVKSMLN NFDM+DLGEADVILGIKI R ENG LDQSHYIEK LKKYNYFDSKP CTPYDSSVKL KNTGD
Subjt: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
Query: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
SVNQSEYASIIGSLRYAADCTRPDIAY VGLLCRFTSRPSLEHWNA+ERVMRYLKK QNLGLHYNKFPAVLEGYNDAD NS D+S ATSGYIFNIAG
Subjt: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
Query: VA
VA
Subjt: VA
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| A0A5D3BLQ7 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.2e-91 | 84.65 | Show/hide |
Query: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
+ +GR+CIIICLYVDDMLIFGSNLH+INDVKSML+ANFDM+DLGEADVILGIKI R ENG LDQSHYIEK LKKYNYF+SKP CTPYDSSVKL KNTGD
Subjt: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
Query: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
SVNQSEYASIIGSLRYAADCTRPDIAY +GLLCRFTSR SLEHWNA+ERVMRYLKKTQNLGLHYNKF VLEGY DAD NSL D+S A SGYIF I A
Subjt: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
Query: VA
VA
Subjt: VA
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| A0A5D3C7T6 Reverse transcriptase Ty1/copia-type domain-containing protein | 9.7e-94 | 85.64 | Show/hide |
Query: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
+ +GRLCIIICLYVDD+LIFGSNL+VINDVKSML+ NFDM++L EADVILGIKI R +NG LDQSHYIEK LKKYNYFDSKP CTPYDSSVKL +NTGD
Subjt: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
Query: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
SVNQSEYASIIGSLRYAADCTRPDIAY VGLLCRFTSRPSLEHWN +ER++RYLKKTQNLGLHYNKFPAVLEGY DAD NSL D S ATSGYIFNIAGGA
Subjt: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
Query: VA
VA
Subjt: VA
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| A0A5D3D4T4 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.1e-97 | 88.61 | Show/hide |
Query: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
+ +GRLCIIICLYVDDMLIFGSNLHVINDVKSML+ NFDM+DLGEADVILGIKI R ENG FLDQSHYIEK+LKKYNYFDSKP CTPYDSSVKL KNTGD
Subjt: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
Query: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
SVNQ+EYASIIGSLRYA D TRP IAY VGLLCRFTSRPSLEHWNA+ERVMRYLKKTQNLGLHYNKFP VLEGY+DAD NSLLD+S ATSGYIFNIAGGA
Subjt: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
Query: VA
VA
Subjt: VA
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| A0A5D3DJH9 Putative polyprotein | 1.1e-92 | 84.16 | Show/hide |
Query: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
+ KGRLCIIICLYVDDML F SNLHVINDVKSML+ NFDM+DLGEAD+ILGIKI R +NG LDQS+YIEK LKKYNYFDSKP CTPYDSSVKL KNTGD
Subjt: RLKGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGD
Query: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
+VNQSEY SIIGSLRY ADCTRPDIAY VGLLCRFTSRP LEHWNA+ER+MRYLKKTQNLGLHYNKF VLEGYND D NSL D+S ATSGYIFNIAGG
Subjt: SVNQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAGGA
Query: VA
VA
Subjt: VA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.7e-23 | 33.85 | Show/hide |
Query: IIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGDSVNQSEY
I + LYVDD++I ++ +N+ K L F M DL E +GI+I E+ +L QS Y++K L K+N + TP S + D +
Subjt: IIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGDSVNQSEY
Query: ASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNK---FPAVLEGYNDADLNSLLDESNATSGYIFNI
S+IG L Y CTRPD+ V +L R++S+ + E W ++RV+RYLK T ++ L + K F + GY D+D + +T+GY+F +
Subjt: ASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNK---FPAVLEGYNDADLNSLLDESNATSGYIFNI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.9e-36 | 40.2 | Show/hide |
Query: IIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKII--RIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGDSVNQS
II+ LYVDDMLI G + +I +K L+ +FDM+DLG A ILG+KI+ R +L Q YIE+ L+++N ++KP TP +KL K + +
Subjt: IIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKII--RIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGDSVNQS
Query: E-------YASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAG
+ Y+S +GSL YA CTRPDIA+ VG++ RF P EHW A++ ++RYL+ T L + +L+GY DAD+ +D +++GY+F +G
Subjt: E-------YASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAVLEGYNDADLNSLLDESNATSGYIFNIAG
Query: GAVA
GA++
Subjt: GAVA
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 4.3e-22 | 33.15 | Show/hide |
Query: ICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGDSVNQSEYAS
+ LYVDD+L+ GS+ ++N + L++ F M+DLG LGI+I +G FL Q+ Y E+ L D KP TP + +T + S++ S
Subjt: ICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGDSVNQSEYAS
Query: IIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAV-LEGYNDADLNSLLDESNATSGY
I+G+L+Y TRPDI+Y V ++C+ P+L ++ ++RV+RY+K T GL+ +K + ++ + D+D +T+G+
Subjt: IIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAV-LEGYNDADLNSLLDESNATSGY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.7e-24 | 36.27 | Show/hide |
Query: KGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGDSV
+G+ + + +YVDD+LI G++ ++++ L+ F ++D E LGI+ R+ G L Q YI L + N +KP TP S KL +G +
Subjt: KGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGDSV
Query: -NQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAV-LEGYNDADLNSLLDESNATSGYI
+ +EY I+GSL+Y A TRPDI+Y V L +F P+ EH A++R++RYL T N G+ K + L Y+DAD D+ +T+GYI
Subjt: -NQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAV-LEGYNDADLNSLLDESNATSGYI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.1e-25 | 35.23 | Show/hide |
Query: KGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGDSV
+GR I + +YVDD+LI G++ ++ L+ F +++ + LGI+ R+ G L Q Y L + N +KP TP +S KL ++G +
Subjt: KGRLCIIICLYVDDMLIFGSNLHVINDVKSMLNANFDMEDLGEADVILGIKIIRIENGFFLDQSHYIEKSLKKYNYFDSKPPCTPYDSSVKLLKNTGDSV
Query: -NQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAV-LEGYNDADLNSLLDESNATSGYI
+ +EY I+GSL+Y A TRPD++Y V L ++ P+ +HWNA++RV+RYL T + G+ K + L Y+DAD D+ +T+GYI
Subjt: -NQSEYASIIGSLRYAADCTRPDIAYVVGLLCRFTSRPSLEHWNAMERVMRYLKKTQNLGLHYNKFPAV-LEGYNDADLNSLLDESNATSGYI
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