| GenBank top hits | e value | %identity | Alignment |
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| GAU21337.1 hypothetical protein TSUD_189240 [Trifolium subterraneum] | 1.8e-61 | 84.17 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
INDEM SLESN+TWHLVDLP GCK IGCKW+L+KKLK DG+V+KYK RLV KGFRQRENIDFFDTF+PVTRITSIRVLISIA L NL++HQMDVK AFLN
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
Query: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
GDLEEEIYMEQPEGF+++ QE+KVCKLDKSLYGLKQAPK
Subjt: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| GAU47690.1 hypothetical protein TSUD_245810 [Trifolium subterraneum] | 6.8e-61 | 83.45 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
INDEM SLESN+TWHLVDLP GCK IGCKW+L+KKLK DG+V+KYK RLV KGFRQRENIDFFDTF+PVTRITSIRVLISI L NL++HQMDVK AFLN
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
Query: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
GDLEEEIYMEQPEGF+++ QE+KVCKLDKSLYGLKQAPK
Subjt: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| GAU49932.1 hypothetical protein TSUD_408340 [Trifolium subterraneum] | 8.9e-61 | 82.73 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
INDEM SLESN+TWHLVD P GCK IGCKW+L+KKLK DG+V+KYK RL+ KGFRQRENIDFFDTF+PVTRITSIRV ISIATL NL++HQMDVK AFLN
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
Query: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
GDLEEEIYMEQPEGF+++ QE+KVCKLDKSLYGLKQAPK
Subjt: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| KAA0046026.1 putative Polyprotein [Cucumis melo var. makuwa] | 1.4e-61 | 89.93 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
INDEM SLESNRTWHLVDLP GCKAIGCKWVLRKKLK DGSVDKYK RLV KGFRQRENIDFFDTF+PVTRITSIRVLISI LNNLLIHQMDVK AFLN
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
Query: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
DLEEEIYMEQ EGFIV+ QESKVCKLDKSLYGLKQA K
Subjt: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| TYK22685.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 8.0e-62 | 88.49 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
INDEM SLESNRTWHLVDLP CKAIGCKWVLRKK K DGS+DKYK RLV KGFRQREN+DFFDTF+ VTRITSIRVLISIA LNNLLIHQMDVK FLN
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
Query: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
GDLEEEIYMEQPEGFIV QESKVCKLDKSLYGLKQAPK
Subjt: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2Z6MWZ1 Reverse transcriptase Ty1/copia-type domain-containing protein | 8.6e-62 | 84.17 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
INDEM SLESN+TWHLVDLP GCK IGCKW+L+KKLK DG+V+KYK RLV KGFRQRENIDFFDTF+PVTRITSIRVLISIA L NL++HQMDVK AFLN
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
Query: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
GDLEEEIYMEQPEGF+++ QE+KVCKLDKSLYGLKQAPK
Subjt: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| A0A2Z6PC97 CCHC-type domain-containing protein | 3.3e-61 | 83.45 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
INDEM SLESN+TWHLVDLP GCK IGCKW+L+KKLK DG+V+KYK RLV KGFRQRENIDFFDTF+PVTRITSIRVLISI L NL++HQMDVK AFLN
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
Query: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
GDLEEEIYMEQPEGF+++ QE+KVCKLDKSLYGLKQAPK
Subjt: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| A0A2Z6PHW1 CCHC-type domain-containing protein | 4.3e-61 | 82.73 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
INDEM SLESN+TWHLVD P GCK IGCKW+L+KKLK DG+V+KYK RL+ KGFRQRENIDFFDTF+PVTRITSIRV ISIATL NL++HQMDVK AFLN
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
Query: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
GDLEEEIYMEQPEGF+++ QE+KVCKLDKSLYGLKQAPK
Subjt: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| A0A5A7TV55 Putative Polyprotein | 6.6e-62 | 89.93 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
INDEM SLESNRTWHLVDLP GCKAIGCKWVLRKKLK DGSVDKYK RLV KGFRQRENIDFFDTF+PVTRITSIRVLISI LNNLLIHQMDVK AFLN
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
Query: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
DLEEEIYMEQ EGFIV+ QESKVCKLDKSLYGLKQA K
Subjt: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| A0A5D3DGJ1 Retrotransposon protein, putative, Ty1-copia sub-class | 3.9e-62 | 88.49 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
INDEM SLESNRTWHLVDLP CKAIGCKWVLRKK K DGS+DKYK RLV KGFRQREN+DFFDTF+ VTRITSIRVLISIA LNNLLIHQMDVK FLN
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
Query: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
GDLEEEIYMEQPEGFIV QESKVCKLDKSLYGLKQAPK
Subjt: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.7e-27 | 44.6 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
IN E+ + + N TW + P + +WV K G+ +YK RLV +GF Q+ ID+ +TF PV RI+S R ++S+ NL +HQMDVK AFLN
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFLN
Query: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
G L+EEIYM P+G + VCKL+K++YGLKQA +
Subjt: GDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.2e-37 | 54.23 | Show/hide |
Query: MARINDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIA
M + +EM SL+ N T+ LV+LP G + + CKWV + K D + +YK RLV KGF Q++ IDF + F+PV ++TSIR ++S+A +L + Q+DVK A
Subjt: MARINDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIA
Query: FLNGDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
FL+GDLEEEIYMEQPEGF V ++ VCKL+KSLYGLKQAP+
Subjt: FLNGDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 3.4e-15 | 43.9 | Show/hide |
Query: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIA
+ +E+ +L N+TW LV P +GCKWV + KL DG++D+ K RLV KGF Q E I F +T++PV R +IR ++++A
Subjt: INDEMYSLESNRTWHLVDLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.9e-30 | 45.71 | Show/hide |
Query: INDEMYSLESNRTWHLV-DLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFL
+ E+ + N TW LV P+ +GC+W+ KK DGS+++YK RLV KG+ QR +D+ +TF+PV + TSIR+++ +A + I Q+DV AFL
Subjt: INDEMYSLESNRTWHLV-DLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFL
Query: NGDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
G L +++YM QP GFI D+ + VCKL K+LYGLKQAP+
Subjt: NGDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.4e-30 | 44.29 | Show/hide |
Query: INDEMYSLESNRTWHLV-DLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFL
+ E+ + N TW LV P +GC+W+ KK DGS+++YK RLV KG+ QR +D+ +TF+PV + TSIR+++ +A + I Q+DV AFL
Subjt: INDEMYSLESNRTWHLV-DLPTGCKAIGCKWVLRKKLKLDGSVDKYKTRLVEKGFRQRENIDFFDTFTPVTRITSIRVLISIATLNNLLIHQMDVKIAFL
Query: NGDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
G L +E+YM QP GF+ D+ VC+L K++YGLKQAP+
Subjt: NGDLEEEIYMEQPEGFIVYDQESKVCKLDKSLYGLKQAPK
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