| GenBank top hits | e value | %identity | Alignment |
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| RVW26456.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.4e-90 | 72.69 | Show/hide |
Query: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
EE QV E N EIS++Y TG++W+R N+V+++IFA+ VA +II ++D EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPV+ TP+ +K VG+KW
Subjt: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
Query: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
VFV KRNENNE+ RYKARLVAQGFSQRPGIDYEETYSPV+DAIT R+LISL V E LDM LMDV+TAYLYGS+ N+IYMKIPEGFK+P + N+ R + S
Subjt: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
Query: IKLQRSLYGLKQLGRMWYNRLSEYLLK
IKLQRSLYGLKQ GRMWYNRLSEYLLK
Subjt: IKLQRSLYGLKQLGRMWYNRLSEYLLK
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| RVW50867.1 Copia protein [Vitis vinifera] | 1.4e-90 | 72.69 | Show/hide |
Query: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
EE QV E N EIS++Y TG++W+R N+V+++IFA+ VA +II ++D EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPV+ TP+ +K VG+KW
Subjt: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
Query: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
VFV KRNENNE+ RYKARLVAQGFSQRPGIDYEETYSPV+DAIT R+LISL V E LDM LMDV+TAYLYGS+ N+IYMKIPEGFK+P + N+ R + S
Subjt: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
Query: IKLQRSLYGLKQLGRMWYNRLSEYLLK
IKLQRSLYGLKQ GRMWYNRLSEYLLK
Subjt: IKLQRSLYGLKQLGRMWYNRLSEYLLK
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| RVW59049.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.4e-90 | 72.69 | Show/hide |
Query: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
EE QV E N EIS++Y TG++W+R N+V+++IFA+ VA +II ++D EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPV+ TP+ +K VG+KW
Subjt: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
Query: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
VFV KRNENNE+ RYKARLVAQGFSQRPGIDYEETYSPV+DAIT R+LISL V E LDM LMDV+TAYLYGS+ N+IYMKIPEGFK+P + N+ R + S
Subjt: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
Query: IKLQRSLYGLKQLGRMWYNRLSEYLLK
IKLQRSLYGLKQ GRMWYNRLSEYLLK
Subjt: IKLQRSLYGLKQLGRMWYNRLSEYLLK
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| RVW89885.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.4e-90 | 72.69 | Show/hide |
Query: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
EE QV E N EIS++Y TG++W+R N+V+++IFA+ VA +II ++D EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPV+ TP+ +K VG+KW
Subjt: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
Query: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
VFV KRNENNE+ RYKARLVAQGFSQRPGIDYEETYSPV+DAIT R+LISL V E LDM LMDV+TAYLYGS+ N+IYMKIPEGFK+P + N+ R + S
Subjt: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
Query: IKLQRSLYGLKQLGRMWYNRLSEYLLK
IKLQRSLYGLKQ GRMWYNRLSEYLLK
Subjt: IKLQRSLYGLKQLGRMWYNRLSEYLLK
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| RVX16158.1 Copia protein [Vitis vinifera] | 1.4e-90 | 72.69 | Show/hide |
Query: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
EE QV E N EIS++Y TG++W+R N+V+++IFA+ VA +II ++D EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPV+ TP+ +K VG+KW
Subjt: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
Query: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
VFV KRNENNE+ RYKARLVAQGFSQRPGIDYEETYSPV+DAIT R+LISL V E LDM LMDV+TAYLYGS+ N+IYMKIPEGFK+P + N+ R + S
Subjt: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
Query: IKLQRSLYGLKQLGRMWYNRLSEYLLK
IKLQRSLYGLKQ GRMWYNRLSEYLLK
Subjt: IKLQRSLYGLKQLGRMWYNRLSEYLLK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438CTC8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.6e-91 | 72.69 | Show/hide |
Query: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
EE QV E N EIS++Y TG++W+R N+V+++IFA+ VA +II ++D EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPV+ TP+ +K VG+KW
Subjt: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
Query: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
VFV KRNENNE+ RYKARLVAQGFSQRPGIDYEETYSPV+DAIT R+LISL V E LDM LMDV+TAYLYGS+ N+IYMKIPEGFK+P + N+ R + S
Subjt: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
Query: IKLQRSLYGLKQLGRMWYNRLSEYLLK
IKLQRSLYGLKQ GRMWYNRLSEYLLK
Subjt: IKLQRSLYGLKQLGRMWYNRLSEYLLK
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| A0A438ET65 Copia protein | 6.6e-91 | 72.69 | Show/hide |
Query: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
EE QV E N EIS++Y TG++W+R N+V+++IFA+ VA +II ++D EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPV+ TP+ +K VG+KW
Subjt: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
Query: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
VFV KRNENNE+ RYKARLVAQGFSQRPGIDYEETYSPV+DAIT R+LISL V E LDM LMDV+TAYLYGS+ N+IYMKIPEGFK+P + N+ R + S
Subjt: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
Query: IKLQRSLYGLKQLGRMWYNRLSEYLLK
IKLQRSLYGLKQ GRMWYNRLSEYLLK
Subjt: IKLQRSLYGLKQLGRMWYNRLSEYLLK
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| A0A438ETU3 Copia protein | 6.6e-91 | 72.69 | Show/hide |
Query: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
EE QV E N EIS++Y TG++W+R N+V+++IFA+ VA +II ++D EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPV+ TP+ +K VG+KW
Subjt: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
Query: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
VFV KRNENNE+ RYKARLVAQGFSQRPGIDYEETYSPV+DAIT R+LISL V E LDM LMDV+TAYLYGS+ N+IYMKIPEGFK+P + N+ R + S
Subjt: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
Query: IKLQRSLYGLKQLGRMWYNRLSEYLLK
IKLQRSLYGLKQ GRMWYNRLSEYLLK
Subjt: IKLQRSLYGLKQLGRMWYNRLSEYLLK
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| A0A438HZK0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.6e-91 | 72.69 | Show/hide |
Query: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
EE QV E N EIS++Y TG++W+R N+V+++IFA+ VA +II ++D EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPV+ TP+ +K VG+KW
Subjt: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
Query: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
VFV KRNENNE+ RYKARLVAQGFSQRPGIDYEETYSPV+DAIT R+LISL V E LDM LMDV+TAYLYGS+ N+IYMKIPEGFK+P + N+ R + S
Subjt: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
Query: IKLQRSLYGLKQLGRMWYNRLSEYLLK
IKLQRSLYGLKQ GRMWYNRLSEYLLK
Subjt: IKLQRSLYGLKQLGRMWYNRLSEYLLK
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| A0A438K4P3 Copia protein | 6.6e-91 | 72.69 | Show/hide |
Query: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
EE QV E N EIS++Y TG++W+R N+V+++IFA+ VA +II ++D EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPV+ TP+ +K VG+KW
Subjt: EETQVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKW
Query: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
VFV KRNENNE+ RYKARLVAQGFSQRPGIDYEETYSPV+DAIT R+LISL V E LDM LMDV+TAYLYGS+ N+IYMKIPEGFK+P + N+ R + S
Subjt: VFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCS
Query: IKLQRSLYGLKQLGRMWYNRLSEYLLK
IKLQRSLYGLKQ GRMWYNRLSEYLLK
Subjt: IKLQRSLYGLKQLGRMWYNRLSEYLLK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.7e-30 | 40.64 | Show/hide |
Query: AHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSP
AH I ++ P S DE + R D W+EAI ELN+ + + P+ V +WVF K NE RYKARLVA+GF+Q+ IDYEET++P
Subjt: AHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSP
Query: VVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCSIKLQRSLYGLKQLGRMWYNRLSEYL
V + R+++SL + NL +H MDV TA+L G+L EIYM++P+G + NS +C KL +++YGLKQ R W+ + L
Subjt: VVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCSIKLQRSLYGLKQLGRMWYNRLSEYL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-29 | 38.76 | Show/hide |
Query: DYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRY
D EP+S+ E + + + +A+Q E+ SL K + ++ PKG + + KWVF K++ + ++ RYKARLV +GF Q+ GID++E +SPVV ++R
Subjt: DYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRY
Query: LISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCSIKLQRSLYGLKQLGRMWYNRLSEYL
++SL +L++ +DV TA+L+G L EIYM+ PEGF++ +C KL +SLYGLKQ R WY + ++
Subjt: LISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCSIKLQRSLYGLKQLGRMWYNRLSEYL
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.2e-11 | 41.18 | Show/hide |
Query: EPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLI
EPKSV KD P W +A+Q EL++L++ + + ++ P +G KWVF K + + + R KARLVA+GF Q GI + ETYSPVV T+R ++
Subjt: EPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLI
Query: SL
++
Subjt: SL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.5e-28 | 33.18 | Show/hide |
Query: QVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKWVFV
Q+ +NN+ +N G R ++ Y++A ++ E+ EP++ + KD +W+ A+ +E+N+ + V P + VG +W+F
Subjt: QVYEDNNEISINYTMTGKRWNRINVVVDSIFAYNVAHNIIHENKDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKWVFV
Query: HKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCSIKL
K N + + RYKARLVA+G++QRPG+DY ET+SPV+ + ++R ++ + V + + +DV A+L G+L +++YM P GF R KL
Subjt: HKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDVVTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCSIKL
Query: QRSLYGLKQLGRMWYNRLSEYLL
+++LYGLKQ R WY L YLL
Subjt: QRSLYGLKQLGRMWYNRLSEYLL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-27 | 37.04 | Show/hide |
Query: KWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDV
+W++A+ +E+N+ + V P + VG +W+F K N + + RYKARLVA+G++QRPG+DY ET+SPV+ + ++R ++ + V + + +DV
Subjt: KWKEAIQAELNSLTKREVFGPVIHTPKGIKCVGFKWVFVHKRNENNEVTRYKARLVAQGFSQRPGIDYEETYSPVVDAITLRYLISLTVCENLDMHLMDV
Query: VTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCSIKLQRSLYGLKQLGRMWYNRLSEYLL
A+L G+L +E+YM P GF R +L++++YGLKQ R WY L YLL
Subjt: VTAYLYGSLVNEIYMKIPEGFKIPKSYNSNSRELCSIKLQRSLYGLKQLGRMWYNRLSEYLL
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