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Cmc02g0043121 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0043121
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-protease polyprotein
Genome locationCMiso1.1chr02:5217967..5220298
RNA-Seq ExpressionCmc02g0043121
SyntenyCmc02g0043121
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016020 - membrane (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038832.1 pol protein [Cucumis melo var. makuwa]4.9e-0764.44Show/hide
Query:  VRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFW
        V+V YE DRRG R++ EGH  MSSF AS +CLC F FE+FK KFW
Subjt:  VRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFW
KAA0061928.1 gag-protease polyprotein [Cucumis melo var. makuwa]1.8e-0970.83Show/hide
Query:  MVRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFWLE
        MV+V YE DR+GARR+ EGH GMSSFIAS    C F FE+FKFKFWLE
Subjt:  MVRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFWLE
TYK24001.1 gag-protease polyprotein [Cucumis melo var. makuwa]1.8e-0970.83Show/hide
Query:  MVRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFWLE
        MV+V YE DR+GARR+ EGH GMSSFIAS    C F FE+FKFKFWLE
Subjt:  MVRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFWLE
TrEMBL top hitse value%identityAlignment
A0A5A7T5S4 Pol protein2.4e-0764.44Show/hide
Query:  VRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFW
        V+V YE DRRG R++ EGH  MSSF AS +CLC F FE+FK KFW
Subjt:  VRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFW
A0A5A7V2W6 Gag-protease polyprotein8.7e-1070.83Show/hide
Query:  MVRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFWLE
        MV+V YE DR+GARR+ EGH GMSSFIAS    C F FE+FKFKFWLE
Subjt:  MVRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFWLE
A0A5D3DK05 Gag-protease polyprotein8.7e-1070.83Show/hide
Query:  MVRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFWLE
        MV+V YE DR+GARR+ EGH GMSSFIAS    C F FE+FKFKFWLE
Subjt:  MVRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFWLE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGGGTATCATACGAGGTAGACCGACGAGGGGCAAGAAGGATATGTGAAGGCCATACGGGAATGTCGAGTTTTATTGCTTCCGCTAAATGTCTTTGTTATTTTCG
TTTTGAAGATTTTAAATTTAAGTTTTGGTTAGAACATTTATTCATTTGTTTCATTTGA
mRNA sequenceShow/hide mRNA sequence
TTATTATTATTTTATTTAAAATAAAACCTAAACCATTCCCTTCTTCTCCTTCTTCGTGCAGCCGCCCTCTTCTCTTTTTCTTCCTCTTATTCACCGAGCAACAGCGCCGC
CACCCACCCCTTCTCTCTATGTTCGTTCGTCCAACTGGTCACCGCCCTCCGTTCACCCAAGCTTAGCGCCAGCCGCCGTCGAGTCCTCACAAAAGCCCGAATCATTCCTC
TACGCACGACACCGGGTCTAAAGTCGTGCACGGTGTTTGTCGTGCGTCTCCTTGTCCGCGTGAAGCTCGCTTCGTCGCTCGCCTCAGCCTTGCGTTTTCTGCCTTGTTCT
GTCACCATGAATTGCTCCCGTTTTCGTCCGCCGTCGCGTTCCTCTCAAACCTAACTGCTGCCGCCGCATTCTGTCTGCCCCTCTCCGTTCGCGCATCCAGAATCATCGCC
ACCTACAGATCCGCCAGCCGTTGAGGTTGGTTAGTTGGATCTTAATGGATTAAGGATCGTAGCTAAATCTTAAGTTACGTAGCAATGGTAAGGGTATCATACGAGGTAGA
CCGACGAGGGGCAAGAAGGATATGTGAAGGCCATACGGGAATGTCGAGTTTTATTGCTTCCGCTAAATGTCTTTGTTATTTTCGTTTTGAAGATTTTAAATTTAAGTTTT
GGTTAGAACATTTATTCATTTGTTTCATTTGAAATTTCGTAGTCTATGTTTTGAAACTTTTGAAATTGATTTGAATTAGGGCCCGAAGACAATTTTTTTTATATCTTGAG
TTTTAATGAAATTTGAATAGGGTCTTTATTGAGTTTTTATGATTGGATATTGTCGGGTCTTAGTAGTAAGTAATGACCTCAGCTTAGACTGAAAAGTTGGGTCATTACAC
GCATGTTGTTGATGGCGTGGTTGATGGGGCATTTTTGTATTTTCCATTGTGAGTTTTTTTCGTTTTCGAAATTGTTTTATACGGTGTAAATATTTTGCTGCTTTGTTATA
TTTTTTAAAAGACCCCTAAAAGTTAGTTAAGATTCGATTGAAGATTTGG
Protein sequenceShow/hide protein sequence
MVRVSYEVDRRGARRICEGHTGMSSFIASAKCLCYFRFEDFKFKFWLEHLFICFI