; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc02g0043281 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0043281
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCMiso1.1chr02:5437465..5441236
RNA-Seq ExpressionCmc02g0043281
SyntenyCmc02g0043281
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK18848.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]9.6e-11449.03Show/hide
Query:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------
        MPLKPLKPSIS AQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS        
Subjt:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------

Query:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------
                                   DVVSWTSIISG SKLGFEKEALG                                                  
Subjt:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ
                                                                                   +HGGLINQGMMVFEAMKDVYNISPQ
Subjt:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ

Query:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK
        IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK
Subjt:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK

Query:  MAGCSWIELVNPSNPV
        MAGCSWIELVNPSNPV
Subjt:  MAGCSWIELVNPSNPV

XP_008450427.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 [Cucumis melo]7.8e-11649.52Show/hide
Query:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------
        MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS        
Subjt:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------

Query:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------
                                   DVVSWTSIISGFSKLGFEKEALG                                                  
Subjt:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ
                                                                                   +HGGLINQGMMVFEAMKDVYNISPQ
Subjt:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ

Query:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK
        IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK
Subjt:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK

Query:  MAGCSWIELVNPSNPVG
        MAGCSWIELVNPSNPVG
Subjt:  MAGCSWIELVNPSNPVG

XP_011660133.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus]9.0e-10446.12Show/hide
Query:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------
        MPLKPLKPSIS AQFTQIHAKLLTNPKPHIFNPLLGSLVNSI PENGLFLYNQML YPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS        
Subjt:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------

Query:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------
                                   DVVSWTSIISG SKLGFEKEAL                                                   
Subjt:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ
                                                                                   +HGGLINQGMMVFEAMKDVYNISPQ
Subjt:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ

Query:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK
        +RHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQ+HGNEKKYEKVRE LLGSKGVTVG FALLSNTYA CDRWNDANDVRVAMRSRGLKK
Subjt:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK

Query:  MAGCSWIELVNPSNPV
        MAG SWIE+V+ + P+
Subjt:  MAGCSWIELVNPSNPV

XP_011660134.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X2 [Cucumis sativus]4.2e-10949.48Show/hide
Query:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSI
        MPLKPLKPSIS AQFTQIHAKLLTNPKPHIFNPLLGSLVNSI PENGLFLYNQML YPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSI
Subjt:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSI

Query:  ISGFSKLGFEKEALG-------------------------------------------------------------------------------------
        ISG SKLGFEKEAL                                                                                      
Subjt:  ISGFSKLGFEKEALG-------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPV
                                                +HGGLINQGMMVFEAMKDVYNISPQ+RHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPV
Subjt:  ----------------------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPV

Query:  WGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPV
        WGALLHACQ+HGNEKKYEKVRE LLGSKGVTVG FALLSNTYA CDRWNDANDVRVAMRSRGLKKMAG SWIE+V+ + P+
Subjt:  WGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPV

XP_016900887.1 PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X2 [Cucumis melo]3.6e-12153.11Show/hide
Query:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSI
        MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSI
Subjt:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSI

Query:  ISGFSKLGFEKEALG-------------------------------------------------------------------------------------
        ISGFSKLGFEKEALG                                                                                     
Subjt:  ISGFSKLGFEKEALG-------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPV
                                                +HGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPV
Subjt:  ----------------------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPV

Query:  WGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVG
        WGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVG
Subjt:  WGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVG

TrEMBL top hitse value%identityAlignment
A0A0A0LXJ1 Uncharacterized protein4.3e-10446.12Show/hide
Query:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------
        MPLKPLKPSIS AQFTQIHAKLLTNPKPHIFNPLLGSLVNSI PENGLFLYNQML YPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS        
Subjt:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------

Query:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------
                                   DVVSWTSIISG SKLGFEKEAL                                                   
Subjt:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ
                                                                                   +HGGLINQGMMVFEAMKDVYNISPQ
Subjt:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ

Query:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK
        +RHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQ+HGNEKKYEKVRE LLGSKGVTVG FALLSNTYA CDRWNDANDVRVAMRSRGLKK
Subjt:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK

Query:  MAGCSWIELVNPSNPV
        MAG SWIE+V+ + P+
Subjt:  MAGCSWIELVNPSNPV

A0A1S4DY27 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X13.8e-11649.52Show/hide
Query:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------
        MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS        
Subjt:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------

Query:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------
                                   DVVSWTSIISGFSKLGFEKEALG                                                  
Subjt:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ
                                                                                   +HGGLINQGMMVFEAMKDVYNISPQ
Subjt:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ

Query:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK
        IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK
Subjt:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK

Query:  MAGCSWIELVNPSNPVG
        MAGCSWIELVNPSNPVG
Subjt:  MAGCSWIELVNPSNPVG

A0A1S4DY30 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X21.8e-12153.11Show/hide
Query:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSI
        MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSI
Subjt:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSI

Query:  ISGFSKLGFEKEALG-------------------------------------------------------------------------------------
        ISGFSKLGFEKEALG                                                                                     
Subjt:  ISGFSKLGFEKEALG-------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPV
                                                +HGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPV
Subjt:  ----------------------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPV

Query:  WGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVG
        WGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVG
Subjt:  WGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVG

A0A5D3D5L6 Pentatricopeptide repeat-containing protein4.6e-11449.03Show/hide
Query:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------
        MPLKPLKPSIS AQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS        
Subjt:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------

Query:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------
                                   DVVSWTSIISG SKLGFEKEALG                                                  
Subjt:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ
                                                                                   +HGGLINQGMMVFEAMKDVYNISPQ
Subjt:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ

Query:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK
        IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK
Subjt:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK

Query:  MAGCSWIELVNPSNPV
        MAGCSWIELVNPSNPV
Subjt:  MAGCSWIELVNPSNPV

A0A6J1H7Z9 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X12.0e-8840.23Show/hide
Query:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------
        MP +P K  IS AQ +QIHA+LLTNPKP +FNPLLG+LV+S++PENGLFLYNQML +PSSHNH+TFTYALKAC  LH+T KGLEIHA LIKS        
Subjt:  MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKS--------

Query:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------
                                   DVVSWTSIISG SKLGF++EALG                                                  
Subjt:  ---------------------------DVVSWTSIISGFSKLGFEKEALG--------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ
                                                                                   +HGGLINQG+MVFEAMKDVYN++P+
Subjt:  ---------------------------------------------------------------------------NHGGLINQGMMVFEAMKDVYNISPQ

Query:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK
        +RHYACMVDMYGKAGLLDEAEAFIKEMP+EAEGPVWGALLHACQ+HGNE +YEKVR+ LL SK +TVG +ALLSNTYASCDRWNDAN+VR AMRSRGLKK
Subjt:  IRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKK

Query:  MAGCSWIELVNPSNPVG
        MAGCSWIEL +P NP+G
Subjt:  MAGCSWIELVNPSNPVG

SwissProt top hitse value%identityAlignment
Q9FIF7 Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic6.6e-3330.69Show/hide
Query:  LLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAH-----------------------------------LIKSDVVSWT
        ++  LV +      L L+ +M     S N FT    L AC  L   + G  +H+                                    +   DV+S+ 
Subjt:  LLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAH-----------------------------------LIKSDVVSWT

Query:  SIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGP
        ++ISG +  G   EA+                         +HGGL++ G+ VF +MK V+N+ PQI HY C+VD+ G+ G L+EA  FI+ +P+E +  
Subjt:  SIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGP

Query:  VWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVN
        + G LL AC+IHGN +  EK+ + L  S+    G + LLSN YAS  +W ++ ++R +MR  G++K  GCS IE+ N
Subjt:  VWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVN

Q9LFL5 Pentatricopeptide repeat-containing protein At5g168601.9e-3237.84Show/hide
Query:  HLIKSDVVSWTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAF
        +++  + V+WTS+++G+   G+ +EALG                        +H G+I+QGM  F  MK V+ +SP   HYAC+VD+ G+AG L+ A   
Subjt:  HLIKSDVVSWTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAF

Query:  IKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIE
        I+EMPME    VW A L  C+IHG  +  E   E +        G++ LLSN YA+  RW D   +R  MR +G+KK  GCSW+E
Subjt:  IKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIE

Q9SHZ8 Pentatricopeptide repeat-containing protein At2g220701.5e-3239.23Show/hide
Query:  DVVSWTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMP
        D VSWTS+I   ++ G  +EAL                          H GL+NQG   F+ MKDV  I P + HYACMVD++G+AGLL EA+ FI++MP
Subjt:  DVVSWTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMP

Query:  MEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIEL
        +E +   WG+LL AC++H N    +   E LL  +    GA++ L+N Y++C +W +A  +R +M+   +KK  G SWIE+
Subjt:  MEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIEL

Q9SI53 Pentatricopeptide repeat-containing protein At2g03880, mitochondrial1.1e-3228.16Show/hide
Query:  IFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIK---------------------------------SDVVS
        ++N ++G    +   +  L L+ +M          T T  L+AC  L   + G++ H H++K                                  DV++
Subjt:  IFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIK---------------------------------SDVVS

Query:  WTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAE
        W+++ISG ++ G+ +EAL                         +H GL+  G   F +MK +Y I P   HY CM+D+ GKAG LD+A   + EM  E +
Subjt:  WTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAE

Query:  GPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIEL
           W  LL AC++  N    E   + ++       G + LLSN YA+  +W+   ++R  MR RG+KK  GCSWIE+
Subjt:  GPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIEL

Q9SY02 Pentatricopeptide repeat-containing protein At4g027501.2e-3431.05Show/hide
Query:  FNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSIISGFSKLGFEKEALG---------------
        F+  L +  + ++ E G  L+ +++        F     L   C     ++  ++   +   D+VSW ++I+G+S+ GF + AL                
Subjt:  FNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSIISGFSKLGFEKEALG---------------

Query:  ---------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVT
                 +H GL+++G   F  M   Y + P  +HYACMVD+ G+AGLL++A   +K MP E +  +WG LL A ++HGN +  E   + +   +   
Subjt:  ---------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVT

Query:  VGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSN
         G + LLSN YAS  RW D   +RV MR +G+KK+ G SWIE+ N ++
Subjt:  VGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSN

Arabidopsis top hitse value%identityAlignment
AT2G03880.1 Pentatricopeptide repeat (PPR) superfamily protein8.0e-3428.16Show/hide
Query:  IFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIK---------------------------------SDVVS
        ++N ++G    +   +  L L+ +M          T T  L+AC  L   + G++ H H++K                                  DV++
Subjt:  IFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIK---------------------------------SDVVS

Query:  WTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAE
        W+++ISG ++ G+ +EAL                         +H GL+  G   F +MK +Y I P   HY CM+D+ GKAG LD+A   + EM  E +
Subjt:  WTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAE

Query:  GPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIEL
           W  LL AC++  N    E   + ++       G + LLSN YA+  +W+   ++R  MR RG+KK  GCSWIE+
Subjt:  GPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIEL

AT2G22070.1 pentatricopeptide (PPR) repeat-containing protein1.0e-3339.23Show/hide
Query:  DVVSWTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMP
        D VSWTS+I   ++ G  +EAL                          H GL+NQG   F+ MKDV  I P + HYACMVD++G+AGLL EA+ FI++MP
Subjt:  DVVSWTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMP

Query:  MEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIEL
        +E +   WG+LL AC++H N    +   E LL  +    GA++ L+N Y++C +W +A  +R +M+   +KK  G SWIE+
Subjt:  MEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIEL

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.5e-3631.05Show/hide
Query:  FNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSIISGFSKLGFEKEALG---------------
        F+  L +  + ++ E G  L+ +++        F     L   C     ++  ++   +   D+VSW ++I+G+S+ GF + AL                
Subjt:  FNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSIISGFSKLGFEKEALG---------------

Query:  ---------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVT
                 +H GL+++G   F  M   Y + P  +HYACMVD+ G+AGLL++A   +K MP E +  +WG LL A ++HGN +  E   + +   +   
Subjt:  ---------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVT

Query:  VGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSN
         G + LLSN YAS  RW D   +RV MR +G+KK+ G SWIE+ N ++
Subjt:  VGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSN

AT5G16860.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.4e-3337.84Show/hide
Query:  HLIKSDVVSWTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAF
        +++  + V+WTS+++G+   G+ +EALG                        +H G+I+QGM  F  MK V+ +SP   HYAC+VD+ G+AG L+ A   
Subjt:  HLIKSDVVSWTSIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAF

Query:  IKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIE
        I+EMPME    VW A L  C+IHG  +  E   E +        G++ LLSN YA+  RW D   +R  MR +G+KK  GCSW+E
Subjt:  IKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIE

AT5G59200.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.7e-3430.69Show/hide
Query:  LLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAH-----------------------------------LIKSDVVSWT
        ++  LV +      L L+ +M     S N FT    L AC  L   + G  +H+                                    +   DV+S+ 
Subjt:  LLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAH-----------------------------------LIKSDVVSWT

Query:  SIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGP
        ++ISG +  G   EA+                         +HGGL++ G+ VF +MK V+N+ PQI HY C+VD+ G+ G L+EA  FI+ +P+E +  
Subjt:  SIISGFSKLGFEKEALG------------------------NHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGP

Query:  VWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVN
        + G LL AC+IHGN +  EK+ + L  S+    G + LLSN YAS  +W ++ ++R +MR  G++K  GCS IE+ N
Subjt:  VWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAFALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTGAAACCTCTGAAACCCTCAATTTCATTTGCTCAATTTACTCAAATCCATGCCAAACTTCTCACAAATCCAAAACCCCATATTTTCAACCCTTTGCTC
GGTTCTTTGGTAAACTCCATTTCCCCTGAAAATGGTCTCTTCCTCTACAACCAAATGCTTCACTACCCATCTTCCCACAACCACTTCACCTTCACATATGCCCTC
AAAGCCTGTTGCTTCCTTCATCAAACCCAAAAGGGCCTCGAAATCCATGCCCATCTCATCAAATCAGATGTTGTTTCTTGGACTTCAATCATTTCGGGTTTTTCC
AAGCTCGGTTTTGAAAAAGAAGCTCTGGGTAACCATGGTGGGTTGATCAATCAAGGCATGATGGTGTTTGAAGCCATGAAAGATGTTTATAACATTTCACCTCAG
ATAAGGCATTATGCTTGTATGGTGGACATGTATGGAAAGGCTGGGCTATTAGATGAAGCAGAGGCTTTCATAAAGGAGATGCCTATGGAAGCTGAAGGCCCAGTT
TGGGGAGCTTTGCTTCATGCTTGTCAAATTCATGGGAATGAGAAGAAGTATGAGAAAGTTAGGGAATGTTTGCTTGGAAGTAAAGGGGTTACAGTGGGAGCTTTT
GCTTTGTTATCAAATACTTATGCTAGTTGTGATAGATGGAATGATGCTAATGATGTTCGAGTTGCCATGAGAAGTAGAGGGTTGAAGAAAATGGCGGGATGTAGT
TGGATTGAATTGGTCAATCCTTCAAATCCTGTAGGTTAA
mRNA sequenceShow/hide mRNA sequence
TTTTCCACGTCCCTTTCTTAATTTATATTTTAGATTAAGATTAAGAAGAAAAAAAAAATAGATGCCCTACTTTCACCATCTTCTTCCTCCTCCTATTAGAGCCGT
CGACCACCGCATCTGCCGTCTTGTCTTTTCGCCGGCGACGAGCAGCAGTCTCGATAACAGACTCAGGCCACCATTTTTCGCGTCTCATACGATTCATACCGACAT
GCTCTTCATCCACGTTCGACACCGGAGCTAGCCCACCCCGTTAACACCCACTTCCAACAAGTTTTAAAGCACTTTTTCTTCTTCGTTTGAGACTCCAGCGTGATG
CGTCACGTTTTCGATGGCTGGTCATCTTGCAGCAACTTTTTGACTTGGACTTAGGCTTTTGATTGCTATTCCATTGGCTTCAAATCAGTTTACTTTAAGCTCCAT
ATCTGTAAGTTCAGAGTTTTTCGGTCACCAATCAGCAAGGTTCCGACCCTTTTCGATCAAGGATGAGGTGAGGTGATAGATTGAATGAAGTGAAGTTTTATGGCA
TGGTGCAGGAGATCAAAGGATGTTTACCTTAGGAATTGATAGTTTTACTCAGAAATTATTTATAATAAGTTGCTTCCGCTGAAGTGTGCGGTTATAAGTGTTCAA
TTCATCATTTCCAAGTTCTACACGAATGGTTGAGCAATAGCATGCCATTGAAACCTCTGAAACCCTCAATTTCATTTGCTCAATTTACTCAAATCCATGCCAAAC
TTCTCACAAATCCAAAACCCCATATTTTCAACCCTTTGCTCGGTTCTTTGGTAAACTCCATTTCCCCTGAAAATGGTCTCTTCCTCTACAACCAAATGCTTCACT
ACCCATCTTCCCACAACCACTTCACCTTCACATATGCCCTCAAAGCCTGTTGCTTCCTTCATCAAACCCAAAAGGGCCTCGAAATCCATGCCCATCTCATCAAAT
CAGATGTTGTTTCTTGGACTTCAATCATTTCGGGTTTTTCCAAGCTCGGTTTTGAAAAAGAAGCTCTGGGTAACCATGGTGGGTTGATCAATCAAGGCATGATGG
TGTTTGAAGCCATGAAAGATGTTTATAACATTTCACCTCAGATAAGGCATTATGCTTGTATGGTGGACATGTATGGAAAGGCTGGGCTATTAGATGAAGCAGAGG
CTTTCATAAAGGAGATGCCTATGGAAGCTGAAGGCCCAGTTTGGGGAGCTTTGCTTCATGCTTGTCAAATTCATGGGAATGAGAAGAAGTATGAGAAAGTTAGGG
AATGTTTGCTTGGAAGTAAAGGGGTTACAGTGGGAGCTTTTGCTTTGTTATCAAATACTTATGCTAGTTGTGATAGATGGAATGATGCTAATGATGTTCGAGTTG
CCATGAGAAGTAGAGGGTTGAAGAAAATGGCGGGATGTAGTTGGATTGAATTGGTCAATCCTTCAAATCCTGTAGGTTAAATATAAGAGAGATGGAGTAAGTTGG
GGTGGGAGATTGAACCCTCCAACTGGTAGGGATGGAGGTCATGTTAATATAGTCGAGATAAGTTCATTTTGACATATGTAGTAAGTTATATTTTTTTTGGTTAAA
TTGTATATGTCATTGTATTTTTCTATTGTACATTTTCAAGTCGTATAGATTAAAAATTTTGA
Protein sequenceShow/hide protein sequence
MPLKPLKPSISFAQFTQIHAKLLTNPKPHIFNPLLGSLVNSISPENGLFLYNQMLHYPSSHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSDVVSWTSIISGFS
KLGFEKEALGNHGGLINQGMMVFEAMKDVYNISPQIRHYACMVDMYGKAGLLDEAEAFIKEMPMEAEGPVWGALLHACQIHGNEKKYEKVRECLLGSKGVTVGAF
ALLSNTYASCDRWNDANDVRVAMRSRGLKKMAGCSWIELVNPSNPVG