CuGenDBv2

Gene ID	Cmc02g0044111
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein Ycf2
Genome location	CMiso1.1chr02:6799904..6800212
RNA-Seq Expression	Cmc02g0044111
Synteny	Cmc02g0044111
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016020 - membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	IPR008543 - Uncharacterised protein family Ycf2

Homology

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GenBank top hits

e value

%identity

Alignment

QIT04093.1 Ycf2 protein [Luffa aegyptiaca]

5.2e-39

84.85

Show/hide

Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        MGSN IERS RDQKLLKKEQDV FV  +R +NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PFI+LFHLFHDRN+RGY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

QJR53001.1 hypothetical protein RF2 [Herpetospermum pedunculosum]

5.2e-39

84.85

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        MGSN IERS RDQKLLKKEQDV FV  +R +NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PFI+LFHLFHDRN+RGY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

YP_009439934.1 hypothetical chloroplast RF2 [Gynostemma caulopterum]

2.4e-39

84.85

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        +GSN IERS RDQKLLKKEQDV FV  +RL+NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PFI+LFHLFHDRN+RGY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

YP_009468904.1 hypothetical chloroplast RF2 [Gynostemma compressum]

2.4e-39

84.85

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        +GSN IERS RDQKLLKKEQDV FV  +RL+NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PFI+LFHLFHDRN+RGY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

YP_009752370.1 Ycf2 protein [Bryonia marmorata]

5.2e-39

84.85

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        MGSN IERS RDQKLLKKEQDV FV  +R +NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PFI+LFHLFHDRN+RGY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

TrEMBL top hits

e value

%identity

Alignment

A0A291IAJ3 Protein Ycf2

1.1e-39

84.85

Show/hide

Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        +GSN IERS RDQKLLKKEQDV FV  +RL+NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PFI+LFHLFHDRN+RGY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

A0A2L0WR04 Protein Ycf2

1.1e-39

84.85

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        +GSN IERS RDQKLLKKEQDV FV  +RL+NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PFI+LFHLFHDRN+RGY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

A0A6H0ESM3 Protein Ycf2

2.5e-39

84.85

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        MGSN IERS RDQKLLKKEQDV FV  +R +NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PFI+LFHLFHDRN+RGY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

A0A6H0EV63 Protein Ycf2

2.5e-39

84.85

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        MGSN IERS RDQKLLKKEQDV FV  +R +NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PFI+LFHLFHDRN+RGY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

A0A6M3RUH1 Protein Ycf2

2.5e-39

84.85

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        MGSN IERS RDQKLLKKEQDV FV  +R +NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PFI+LFHLFHDRN+RGY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

SwissProt top hits

e value

%identity

Alignment

P09976 Protein Ycf2

9.3e-39

78.79

Show/hide

Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        +GSN  ERS RDQKLLKK+QD+ FV  KR +NKE+VNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PF  LFHLFHDRN+ GY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

Q09WV7 Protein Ycf2

9.3e-39

79.8

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        +GSN  ERS RD KLLKKEQDV FV  +R +NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PF  LFHLFHDRN+ GY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

Q0ZIV6 Protein Ycf2

2.4e-39

79.8

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        +GSN IERS RDQKLLKK+QDV FV  +R +NKE+VNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PF  LFHLFHDRN+ GY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

Q2QD30 Protein Ycf2

3.4e-41

83.84

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        MGSN IERS RDQKLLKKEQDV FV  +R +NKEIVNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFL K+PFI+LFHLFHDRN+RGY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

Q3C1N4 Protein Ycf2

9.3e-39

78.79

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Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        +GSN  ERS RDQKLLKK+QD+ FV  KR +NKE+VNIFKIITYL NTVS+HPIS DPGCDMVPKDE DMDSSNKISFLNK+PF  LFHLFHDRN+ GY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

3.6e-38

77.78

Show/hide

Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        +GSN  ERS RDQKLLKKEQDV FV  +R +NKEIVNIFKIITYL NTVS+HPIS D GCDMVPKDE DMDSSNKISFLNK+PF  LFHLFH+R + GY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

3.6e-38

77.78

Show/hide

Query:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY
        +GSN  ERS RDQKLLKKEQDV FV  +R +NKEIVNIFKIITYL NTVS+HPIS D GCDMVPKDE DMDSSNKISFLNK+PF  LFHLFH+R + GY
Subjt:  MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGY

Sequences

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CDS sequence

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ATGGGTTCGAATCTTATTGAGAGGTCCATTAGAGATCAAAAATTGTTGAAGAAAGAACAAGATGTTTATTTTGTCTCTTTCAAGCGATTAAAAAATAAAGAAATAGTTAA
TATATTCAAGATAATTACGTATTTACATAATACCGTCTCAGTTCATCCTATTTCATTAGATCCGGGATGTGATATGGTTCCGAAGGATGAACAGGATATGGACAGTTCCA
ATAAGATTTCATTCTTAAACAAAGATCCATTTATTCATTTATTTCATCTATTCCATGACCGGAATAAGAGGGGATACGCACGATTTTGA

mRNA sequence

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Protein sequence

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MGSNLIERSIRDQKLLKKEQDVYFVSFKRLKNKEIVNIFKIITYLHNTVSVHPISLDPGCDMVPKDEQDMDSSNKISFLNKDPFIHLFHLFHDRNKRGYARF

Cmc02g0044111 (gene) of Melon (Charmono) v1.1 genome