| GenBank top hits | e value | %identity | Alignment |
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| KAA0033349.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.8e-82 | 90.4 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
M LVAHYDLELHQM+VKTAFLNGNLDEEVFMDQPEGFM+EGKEHMVCKLKRSIYGLKQASRQ YLKFNDTITSFGFKENIVDRCIYLKISGSKFI+LVLY
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Query: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
VDDILL T DFGLLCQTKEFLSKNFEMKD GEASYVI IEIFRDR HGLLGLSQKAYINKVLE FKM KCSS+
Subjt: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
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| KAA0052755.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.7e-85 | 92.09 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
M LVAHYDLELHQM+VKTAFLNGNLDEEVFMDQPEGFM+EGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Query: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
VDDILL TNDFGLLCQTKEFLSKNFEMKD EASYVIGIEIFRDRTHGLLGLSQ AYINKVLE FKM KCSS+
Subjt: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
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| RYE20331.1 hypothetical protein EOP45_11235, partial [Sphingobacteriaceae bacterium] | 1.1e-79 | 89.35 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
M +VAHYDLELHQM+VKTAFLNGNLDEEVFMDQPEGF+++GKEHMVCKLK+SIYGLKQASRQWYLKFNDT+TSFGFKENIVDRCIYLKISGSKFIILVLY
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Query: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKK
VDDILL TND GLL QTKEFLSKNFEMKD GEASYVIGIEI RDR+ G LGLSQKAYINKVLE FKM K
Subjt: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKK
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| TYK00088.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.5e-84 | 90.4 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
M LVAHYDLELHQM+VKTAF+NGNLDE++FMDQPEGFM+EGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Query: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
VDDILL TNDFGLLCQTKEFLSKNFEMKD GEASYVIGIEIFRDRTHGLL LSQKAYINKVL+ FKM KCSS+
Subjt: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
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| TYK04201.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.7e-85 | 92.09 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
M LVAHYDLELHQM+VKTAFLNGNLDEEVFMDQPEGFM+EGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Query: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
VDDILL TNDFGLLCQTKEFLSKNFEMKD EASYVIGIEIFRDRTHGLLGLSQ AYINKVLE FKM KCSS+
Subjt: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A4V1T029 Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) | 5.3e-80 | 89.35 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
M +VAHYDLELHQM+VKTAFLNGNLDEEVFMDQPEGF+++GKEHMVCKLK+SIYGLKQASRQWYLKFNDT+TSFGFKENIVDRCIYLKISGSKFIILVLY
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Query: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKK
VDDILL TND GLL QTKEFLSKNFEMKD GEASYVIGIEI RDR+ G LGLSQKAYINKVLE FKM K
Subjt: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKK
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| A0A5A7SVZ5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.7e-83 | 90.4 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
M LVAHYDLELHQM+VKTAFLNGNLDEEVFMDQPEGFM+EGKEHMVCKLKRSIYGLKQASRQ YLKFNDTITSFGFKENIVDRCIYLKISGSKFI+LVLY
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Query: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
VDDILL T DFGLLCQTKEFLSKNFEMKD GEASYVI IEIFRDR HGLLGLSQKAYINKVLE FKM KCSS+
Subjt: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
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| A0A5A7UG95 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.4e-86 | 92.09 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
M LVAHYDLELHQM+VKTAFLNGNLDEEVFMDQPEGFM+EGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Query: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
VDDILL TNDFGLLCQTKEFLSKNFEMKD EASYVIGIEIFRDRTHGLLGLSQ AYINKVLE FKM KCSS+
Subjt: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
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| A0A5D3BLU0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-84 | 90.4 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
M LVAHYDLELHQM+VKTAF+NGNLDE++FMDQPEGFM+EGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Query: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
VDDILL TNDFGLLCQTKEFLSKNFEMKD GEASYVIGIEIFRDRTHGLL LSQKAYINKVL+ FKM KCSS+
Subjt: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
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| A0A5D3BWW5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.4e-86 | 92.09 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
M LVAHYDLELHQM+VKTAFLNGNLDEEVFMDQPEGFM+EGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLY
Query: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
VDDILL TNDFGLLCQTKEFLSKNFEMKD EASYVIGIEIFRDRTHGLLGLSQ AYINKVLE FKM KCSS+
Subjt: VDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMKKMLFKCSSN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.1e-29 | 41.76 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISG--SKFIILV
++LV Y+L++HQM+VKTAFLNG L EE++M P+G I VCKL ++IYGLKQA+R W+ F + F + VDRCIY+ G ++ I ++
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISG--SKFIILV
Query: LYVDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMK
LYVDD+++ T D + K +L + F M D E + IGI I + + LSQ AY+ K+L F M+
Subjt: LYVDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.1e-45 | 52.66 | Show/hide |
Query: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLK-ISGSKFIILVL
++L A DLE+ Q++VKTAFL+G+L+EE++M+QPEGF + GK+HMVCKL +S+YGLKQA RQWY+KF+ + S + + D C+Y K S + FIIL+L
Subjt: MTLVAHYDLELHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLK-ISGSKFIILVL
Query: YVDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMK
YVDD+L+ D GL+ + K LSK+F+MKD G A ++G++I R+RT L LSQ+ YI +VLE F MK
Subjt: YVDDILLDTNDFGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKMK
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| P25600 Putative transposon Ty5-1 protein YCL074W | 3.0e-16 | 33.33 | Show/hide |
Query: MNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLDTNDFGL
M+V TAFLN +DE +++ QP GF+ E V +L +YGLKQA W N+T+ GF + + +Y + + I + +YVDD+L+ +
Subjt: MNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLDTNDFGL
Query: LCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINK
+ K+ L+K + MKD G+ +G+ I + ++G + LS + YI K
Subjt: LCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.2e-26 | 38.85 | Show/hide |
Query: LHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLDTND
+ Q++V AFL G L ++V+M QP GF+ + + + VCKL++++YGLKQA R WY++ + + + GF ++ D +++ G + +++YVDDIL+ ND
Subjt: LHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLDTND
Query: FGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKM
LL T + LS+ F +KD E Y +GIE R T L LSQ+ YI +L M
Subjt: FGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKM
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.2e-24 | 38.22 | Show/hide |
Query: LHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLDTND
+ Q++V AFL G L +EV+M QP GF+ + + VC+L+++IYGLKQA R WY++ + + GF +I D +++ G I +++YVDDIL+ ND
Subjt: LHQMNVKTAFLNGNLDEEVFMDQPEGFMIEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLDTND
Query: FGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKM
LL T + LS+ F +K+ + Y +GIE R L LSQ+ Y +L M
Subjt: FGLLCQTKEFLSKNFEMKDTGEASYVIGIEIFRDRTHGLLGLSQKAYINKVLENFKM
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