; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc02g0044801 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0044801
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr02:7993063..7993728
RNA-Seq ExpressionCmc02g0044801
SyntenyCmc02g0044801
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038903.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.9e-7976.67Show/hide
Query:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID
        MINCK ATTPMNVNEKLQQNDGAEMA A                             FMQC SRDHFGA KRVMRYIAGTIEYG+WYSKVSD KLC F D
Subjt:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID

Query:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR
        S+W SSLDDRRSVSANVFTLG GVITWSSKKQATV LSSSEAEYAA TSAACQAIWL+RMLTELQHEQEGATVIFC+NKATISM KN TFHSR KHIDI 
Subjt:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR

Query:  FHFIRDLVAK
        FHFIRDLVA+
Subjt:  FHFIRDLVAK

KAA0055915.1 copia protein [Cucumis melo var. makuwa]1.8e-116100Show/hide
Query:  ATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWASS
        ATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWASS
Subjt:  ATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWASS

Query:  LDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIRFHFIRD
        LDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIRFHFIRD
Subjt:  LDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIRFHFIRD

Query:  LVAKTKSFSVILQHT
        LVAKTKSFSVILQHT
Subjt:  LVAKTKSFSVILQHT

KAA0056051.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa]2.7e-9688.57Show/hide
Query:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID
        MINCK AT P+NVNEKLQQNDGAEMA+AQRFRS+VGGLIYLTHTRPDISYSI VIS FMQ PSRDHF A KRVMRYIAGTIEYG+W SKVS+ KLC F D
Subjt:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID

Query:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR
        SDWASSL DRRSVSANVFTLG GVITWS KKQAT ALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFC+NKATISM KN TFHSR KHIDIR
Subjt:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR

Query:  FHFIRDLVAK
        FHFIRDLVAK
Subjt:  FHFIRDLVAK

TYK28116.1 Zinc finger, CCHC-type [Cucumis melo var. makuwa]9.5e-8697.6Show/hide
Query:  LATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWAS
        LATTPMNVNEKLQQNDGAEMAHAQRFRS VGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYG+WYSKVSDSKLC FIDSDWAS
Subjt:  LATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWAS

Query:  SLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGAT
        SLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEG T
Subjt:  SLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGAT

XP_022148887.1 uncharacterized protein LOC111017449 [Momordica charantia]2.6e-8375.71Show/hide
Query:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID
        M NCK ATT MN+NEKLQQ DG EM  A +FRS+VGGLIYLTHTRPDI++S+ VIS FMQ PS++HFGA K+V+RYIAGT+EY +WYSKVS+ KLC F D
Subjt:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID

Query:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR
        SDWASSLDDR++VSAN+FTLGSGVITWSSKKQA   LSSSEA Y AATS  CQAIWLRR+L ELQ EQEGAT IFC+NKATISM KN TFHSR KHIDI 
Subjt:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR

Query:  FHFIRDLVAK
         HFI DLV K
Subjt:  FHFIRDLVAK

TrEMBL top hitse value%identityAlignment
A0A5A7T7G8 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-7976.67Show/hide
Query:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID
        MINCK ATTPMNVNEKLQQNDGAEMA A                             FMQC SRDHFGA KRVMRYIAGTIEYG+WYSKVSD KLC F D
Subjt:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID

Query:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR
        S+W SSLDDRRSVSANVFTLG GVITWSSKKQATV LSSSEAEYAA TSAACQAIWL+RMLTELQHEQEGATVIFC+NKATISM KN TFHSR KHIDI 
Subjt:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR

Query:  FHFIRDLVAK
        FHFIRDLVA+
Subjt:  FHFIRDLVAK

A0A5A7UQM0 Copia protein8.6e-117100Show/hide
Query:  ATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWASS
        ATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWASS
Subjt:  ATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWASS

Query:  LDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIRFHFIRD
        LDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIRFHFIRD
Subjt:  LDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIRFHFIRD

Query:  LVAKTKSFSVILQHT
        LVAKTKSFSVILQHT
Subjt:  LVAKTKSFSVILQHT

A0A5A7URA0 Putative gag-pol polyprotein, identical1.3e-9688.57Show/hide
Query:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID
        MINCK AT P+NVNEKLQQNDGAEMA+AQRFRS+VGGLIYLTHTRPDISYSI VIS FMQ PSRDHF A KRVMRYIAGTIEYG+W SKVS+ KLC F D
Subjt:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID

Query:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR
        SDWASSL DRRSVSANVFTLG GVITWS KKQAT ALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFC+NKATISM KN TFHSR KHIDIR
Subjt:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR

Query:  FHFIRDLVAK
        FHFIRDLVAK
Subjt:  FHFIRDLVAK

A0A5D3DWI5 Zinc finger, CCHC-type4.6e-8697.6Show/hide
Query:  LATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWAS
        LATTPMNVNEKLQQNDGAEMAHAQRFRS VGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYG+WYSKVSDSKLC FIDSDWAS
Subjt:  LATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWAS

Query:  SLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGAT
        SLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEG T
Subjt:  SLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGAT

A0A6J1D694 uncharacterized protein LOC1110174491.3e-8375.71Show/hide
Query:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID
        M NCK ATT MN+NEKLQQ DG EM  A +FRS+VGGLIYLTHTRPDI++S+ VIS FMQ PS++HFGA K+V+RYIAGT+EY +WYSKVS+ KLC F D
Subjt:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID

Query:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR
        SDWASSLDDR++VSAN+FTLGSGVITWSSKKQA   LSSSEA Y AATS  CQAIWLRR+L ELQ EQEGAT IFC+NKATISM KN TFHSR KHIDI 
Subjt:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR

Query:  FHFIRDLVAK
         HFI DLV K
Subjt:  FHFIRDLVAK

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.6e-2735.05Show/hide
Query:  MINCKLATTPM--NVNEKLQQNDGAEMAHAQRFRSIVGGLIY-LTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSK--VSDSKL
        M NC   +TP+   +N +L  +D  E  +    RS++G L+Y +  TRPD++ ++ ++S +    + + +   KRV+RY+ GTI+  + + K    ++K+
Subjt:  MINCKLATTPM--NVNEKLQQNDGAEMAHAQRFRSIVGGLIY-LTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSK--VSDSKL

Query:  CEFIDSDWASSLDDRRSVSANVFTL-GSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRI
          ++DSDWA S  DR+S +  +F +    +I W++K+Q +VA SS+EAEY A   A  +A+WL+ +LT +  + E    I+ +N+  IS+  N + H R 
Subjt:  CEFIDSDWASSLDDRRSVSANVFTL-GSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRI

Query:  KHIDIRFHFIRDLV
        KHIDI++HF R+ V
Subjt:  KHIDIRFHFIRDLV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.7e-3338.25Show/hide
Query:  MINCKLATTPMNVNEKLQQ-------NDGAEMAHAQRFRSIVGGLIY-LTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSD
        M N K  +TP+  + KL +        +   MA    + S VG L+Y +  TRPDI++++ V+S F++ P ++H+ A K ++RY+ GT    + +   SD
Subjt:  MINCKLATTPMNVNEKLQQ-------NDGAEMAHAQRFRSIVGGLIY-LTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSD

Query:  SKLCEFIDSDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTEL-QHEQEGATVIFCNNKATISMMKNLTFH
          L  + D+D A  +D+R+S +  +FT   G I+W SK Q  VALS++EAEY AAT    + IWL+R L EL  H++E   V++C++++ I + KN  +H
Subjt:  SKLCEFIDSDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTEL-QHEQEGATVIFCNNKATISMMKNLTFH

Query:  SRIKHIDIRFHFIRDLV
        +R KHID+R+H+IR++V
Subjt:  SRIKHIDIRFHFIRDLV

P92519 Uncharacterized mitochondrial protein AtMg008106.3e-2441.4Show/hide
Query:  MINCKLATTPMNVNEKLQQN-DGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFI
        M++CK  +TP+ +  KL  +   A+      FRSIVG L YLT TRPDISY++ ++   M  P+   F   KRV+RY+ GTI +G++  K S   +  F 
Subjt:  MINCKLATTPMNVNEKLQQN-DGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFI

Query:  DSDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIW
        DSDWA     RRS +     LG  +I+WS+K+Q TV+ SS+E EY A    A +  W
Subjt:  DSDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.4e-3841.35Show/hide
Query:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID
        MI  K  TTPM  + KL    G ++     +R IVG L YL  TRPDISY++  +S FM  P+ +H  A KR++RY+AGT  +G++  K +   L  + D
Subjt:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID

Query:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR
        +DWA   DD  S +  +  LG   I+WSSKKQ  V  SS+EAEY +  + + +  W+  +LTEL        VI+C+N     +  N  FHSR+KHI I 
Subjt:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR

Query:  FHFIRDLV
        +HFIR+ V
Subjt:  FHFIRDLV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.6e-3839.9Show/hide
Query:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID
        M+  K   TPM  + KL  + G ++     +R IVG L YL  TRPD+SY++  +S +M  P+ DH+ A KRV+RY+AGT ++G++  K +   L  + D
Subjt:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID

Query:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR
        +DWA   DD  S +  +  LG   I+WSSKKQ  V  SS+EAEY +  + + +  W+  +LTEL  +     VI+C+N     +  N  FHSR+KHI + 
Subjt:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR

Query:  FHFIRDLV
        +HFIR+ V
Subjt:  FHFIRDLV

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.8e-3435.44Show/hide
Query:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID
        ++ CK ++ PM+ +     + G +   A+ +R ++G L+YL  TR DIS+++  +S F + P   H  A  +++ YI GT+  G++YS  ++ +L  F D
Subjt:  MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFID

Query:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR
        + + S  D RRS +     LG+ +I+W SKKQ  V+ SS+EAEY A + A  + +WL +   ELQ      T++FC+N A I +  N  FH R KHI+  
Subjt:  SDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIR

Query:  FHFIRD
         H +R+
Subjt:  FHFIRD

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.6e-1142.11Show/hide
Query:  IYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWASSLDDRRSVS
        +YLT TRPD+++++  +S F          A  +V+ Y+ GT+  G++YS  SD +L  F DSDWAS  D RRSV+
Subjt:  IYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWASSLDDRRSVS

ATMG00810.1 DNA/RNA polymerases superfamily protein4.5e-2541.4Show/hide
Query:  MINCKLATTPMNVNEKLQQN-DGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFI
        M++CK  +TP+ +  KL  +   A+      FRSIVG L YLT TRPDISY++ ++   M  P+   F   KRV+RY+ GTI +G++  K S   +  F 
Subjt:  MINCKLATTPMNVNEKLQQN-DGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFI

Query:  DSDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIW
        DSDWA     RRS +     LG  +I+WS+K+Q TV+ SS+E EY A    A +  W
Subjt:  DSDWASSLDDRRSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAATTGCAAGCTAGCAACTACACCAATGAATGTGAATGAGAAGCTGCAACAAAATGATGGTGCAGAGATGGCCCATGCGCAGCGGTTTAGAAGCATTGTTGGAGG
CTTGATTTATCTAACTCATACCCGTCCCGATATTTCGTATTCTATTTGTGTGATTTCCACGTTTATGCAATGTCCTTCAAGGGATCATTTCGGAGCAGAAAAGCGGGTTA
TGCGATACATTGCTGGAACTATAGAATATGGCATGTGGTACTCTAAAGTTTCTGATAGCAAATTATGCGAGTTTATAGACAGTGATTGGGCGAGCTCCTTGGATGATAGG
CGAAGTGTTTCAGCAAATGTTTTCACTTTAGGGTCAGGAGTTATTACTTGGAGCTCGAAGAAACAAGCAACTGTTGCTTTATCATCTTCGGAAGCAGAATATGCTGCAGC
AACTTCAGCAGCATGTCAGGCAATTTGGTTGCGAAGAATGCTAACAGAACTCCAACATGAGCAAGAGGGAGCAACTGTGATATTCTGCAACAACAAAGCAACGATCTCAA
TGATGAAAAATCTGACATTTCATAGCCGGATAAAGCACATTGATATTCGCTTCCATTTTATTCGTGATTTGGTTGCAAAGACAAAAAGTTTCTCTGTCATATTGCAGCAC
ACATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAATTGCAAGCTAGCAACTACACCAATGAATGTGAATGAGAAGCTGCAACAAAATGATGGTGCAGAGATGGCCCATGCGCAGCGGTTTAGAAGCATTGTTGGAGG
CTTGATTTATCTAACTCATACCCGTCCCGATATTTCGTATTCTATTTGTGTGATTTCCACGTTTATGCAATGTCCTTCAAGGGATCATTTCGGAGCAGAAAAGCGGGTTA
TGCGATACATTGCTGGAACTATAGAATATGGCATGTGGTACTCTAAAGTTTCTGATAGCAAATTATGCGAGTTTATAGACAGTGATTGGGCGAGCTCCTTGGATGATAGG
CGAAGTGTTTCAGCAAATGTTTTCACTTTAGGGTCAGGAGTTATTACTTGGAGCTCGAAGAAACAAGCAACTGTTGCTTTATCATCTTCGGAAGCAGAATATGCTGCAGC
AACTTCAGCAGCATGTCAGGCAATTTGGTTGCGAAGAATGCTAACAGAACTCCAACATGAGCAAGAGGGAGCAACTGTGATATTCTGCAACAACAAAGCAACGATCTCAA
TGATGAAAAATCTGACATTTCATAGCCGGATAAAGCACATTGATATTCGCTTCCATTTTATTCGTGATTTGGTTGCAAAGACAAAAAGTTTCTCTGTCATATTGCAGCAC
ACATAA
Protein sequenceShow/hide protein sequence
MINCKLATTPMNVNEKLQQNDGAEMAHAQRFRSIVGGLIYLTHTRPDISYSICVISTFMQCPSRDHFGAEKRVMRYIAGTIEYGMWYSKVSDSKLCEFIDSDWASSLDDR
RSVSANVFTLGSGVITWSSKKQATVALSSSEAEYAAATSAACQAIWLRRMLTELQHEQEGATVIFCNNKATISMMKNLTFHSRIKHIDIRFHFIRDLVAKTKSFSVILQH
T