| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 7.8e-48 | 80.95 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E SPV MLKSIRILLSI TFY+YEIWQMDVKT FLN NLEESIYM + EGFI Q QEQKVCKLQKSI GLK + +WNIRFDTAIK YGFEQN DEP V
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: YKRIVNSIVAFLVLYVDDILLIGNDV
YK+IVNS+VAFL+LYVDDILLIGNDV
Subjt: YKRIVNSIVAFLVLYVDDILLIGNDV
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 7.3e-46 | 77.95 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E SPV MLKSIRILLSI TFYDYEIWQMDVKT FLN NLEESI+M++ EGFI QGQEQKVCKL +SI GLK + +WNIRFDTAIK YGF+QN DEP V
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: YKRIVNSIVAFLVLYVDDILLIGNDVG
YK+I VAFLVLYVDDILLIGNDVG
Subjt: YKRIVNSIVAFLVLYVDDILLIGNDVG
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-47 | 79.37 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E SP+ M+KSIRILLSI TFYDYEIWQMDVKT FLN NLEESIYM + EGFI++GQEQKVCKLQKSI GLK + +WNIRFDT IK YGFEQN DEP V
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: YKRIVNSIVAFLVLYVDDILLIGNDV
YKRI+NS VAFLVLYVDDILLIGN+V
Subjt: YKRIVNSIVAFLVLYVDDILLIGNDV
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| TYK09500.1 gag/pol protein [Cucumis melo var. makuwa] | 4.3e-46 | 80 | Show/hide |
Query: MLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNS
MLKSIRILLSI TFYDYEIWQ+DVKT FLN NLEESIYM + EGFI++GQEQK+CK QKSI GLK + +WNIRFDTAIK YGFEQN D+P VYK++VNS
Subjt: MLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNS
Query: IVAFLVLYVDDILLIGNDVG
IVAFLVLYVDDILL+GNDVG
Subjt: IVAFLVLYVDDILLIGNDVG
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 7.3e-46 | 77.95 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E SPV MLKSIRILLSI TFYDYEIWQMDVKT FLN NLEESI+M++ EGFI QGQEQKVCKL +SI GLK + +WNIRFDTAIK YGF+QN DEP V
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: YKRIVNSIVAFLVLYVDDILLIGNDVG
YK+I VAFLVLYVDDILLIGNDVG
Subjt: YKRIVNSIVAFLVLYVDDILLIGNDVG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 4.9e-48 | 79.37 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E SP+ M+KSIRILLSI TFYDYEIWQMDVKT FLN NLEESIYM + EGFI++GQEQKVCKLQKSI GLK + +WNIRFDT IK YGFEQN DEP V
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: YKRIVNSIVAFLVLYVDDILLIGNDV
YKRI+NS VAFLVLYVDDILLIGN+V
Subjt: YKRIVNSIVAFLVLYVDDILLIGNDV
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| A0A5A7TZD0 Gag/pol protein | 3.5e-46 | 77.95 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E SPV MLKSIRILLSI TFYDYEIWQMDVKT FLN NLEESI+M++ EGFI QGQEQKVCKL +SI GLK + +WNIRFDTAIK YGF+QN DEP V
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: YKRIVNSIVAFLVLYVDDILLIGNDVG
YK+I VAFLVLYVDDILLIGNDVG
Subjt: YKRIVNSIVAFLVLYVDDILLIGNDVG
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| A0A5D3CDT9 Gag/pol protein | 2.1e-46 | 80 | Show/hide |
Query: MLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNS
MLKSIRILLSI TFYDYEIWQ+DVKT FLN NLEESIYM + EGFI++GQEQK+CK QKSI GLK + +WNIRFDTAIK YGFEQN D+P VYK++VNS
Subjt: MLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNS
Query: IVAFLVLYVDDILLIGNDVG
IVAFLVLYVDDILL+GNDVG
Subjt: IVAFLVLYVDDILLIGNDVG
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| A0A5D3CYF4 Gag/pol protein | 3.5e-46 | 77.95 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E SPV MLKSIRILLSI TFYDYEIWQMDVKT FLN NLEESI+M++ EGFI QGQEQKVCKL +SI GLK + +WNIRFDTAIK YGF+QN DEP V
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: YKRIVNSIVAFLVLYVDDILLIGNDVG
YK+I VAFLVLYVDDILLIGNDVG
Subjt: YKRIVNSIVAFLVLYVDDILLIGNDVG
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| E2GK51 Gag/pol protein (Fragment) | 3.8e-48 | 80.95 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E SPV MLKSIRILLSI TFY+YEIWQMDVKT FLN NLEESIYM + EGFI Q QEQKVCKLQKSI GLK + +WNIRFDTAIK YGFEQN DEP V
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: YKRIVNSIVAFLVLYVDDILLIGNDV
YK+IVNS+VAFL+LYVDDILLIGNDV
Subjt: YKRIVNSIVAFLVLYVDDILLIGNDV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.9e-12 | 35.66 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E +PV + S R +LS+ Y+ ++ QMDVKT FLN L+E IYM +G VCKL K+I GLK + W F+ A+K F ++ + +
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: Y---KRIVNSIVAFLVLYVDDILLIGNDV
Y K +N + +++LYVDD+++ D+
Subjt: Y---KRIVNSIVAFLVLYVDDILLIGNDV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-21 | 44.53 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E SPVV + SIR +LS+ D E+ Q+DVKT FL+ +LEE IYM + EGF G++ VCKL KS+ GLK + W ++FD+ +K + + +P V
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: Y-KRIVNSIVAFLVLYVDDILLIGNDVG
Y KR + L+LYVDD+L++G D G
Subjt: Y-KRIVNSIVAFLVLYVDDILLIGNDVG
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| P25600 Putative transposon Ty5-1 protein YCL074W | 8.2e-08 | 32.26 | Show/hide |
Query: MDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDILL
MDV T FLN ++E IY+ + GF+ + V +L + GLK + + WN + +K GF ++ E +Y R + ++ +YVDD+L+
Subjt: MDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYVYKRIVNSIVAFLVLYVDDILL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.9e-15 | 33.6 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E SPV+ SIRI+L + + I Q+DV FL L + +YM++ GFI++ + VCKL+K++ GLK + AW + + GF + + +
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: YKRIVNSIVAFLVLYVDDILLIGND
+ + ++++YVDDIL+ GND
Subjt: YKRIVNSIVAFLVLYVDDILLIGND
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.9e-15 | 33.6 | Show/hide |
Query: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
E SPV+ SIRI+L + + I Q+DV FL L + +YM++ GF+++ + VC+L+K+I GLK + AW + T + GF + + +
Subjt: EKLSPVVMLKSIRILLSIDTFYDYEIWQMDVKTTFLNFNLEESIYMTRLEGFIEQGQEQKVCKLQKSIDGLKHSFIAWNIRFDTAIKFYGFEQNADEPYV
Query: YKRIVNSIVAFLVLYVDDILLIGND
+ + ++++YVDDIL+ GND
Subjt: YKRIVNSIVAFLVLYVDDILLIGND
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