| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035790.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.9e-40 | 85.71 | Show/hide |
Query: YRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWGI
Y+MDVKSAFLN YLNEEVFVAQPKGFVDSEFP HVYKLNKALYGLKQAPRAWYERLTIYL DKGYS+ GT KTLFINRTSSELI+AQIY+D+ I+G+
Subjt: YRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWGI
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| KAA0037650.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 8.1e-39 | 69.57 | Show/hide |
Query: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
++ + LL + F +RMDVKSAFLN YLNEEV+VAQPKGFVDSEFPQ+VYKLNKALYGLKQAPRAWYERLT+YL ++GYS+G T++TLFINRTS++
Subjt: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
Query: LIVAQIYIDEYYIWG
LIVAQIY+D+ G
Subjt: LIVAQIYIDEYYIWG
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| KAA0039035.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 8.1e-39 | 81.44 | Show/hide |
Query: YRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWG
Y+MD+KSAFLN YLN+EV+VAQPKGFVDSEFPQHVYKLNKALYGLKQAP+AWYE LTIYL +KGYS+GG DKTLFINRTSS+LIVAQIY+D+ G
Subjt: YRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWG
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| TYK01623.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.8e-39 | 72.17 | Show/hide |
Query: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
++ + LL + Y+MDVKSAF+N YLNEEVFV QPK V+SEFP+HVYKLNKALYGLKQAPRAWYERLTIYL DKGYS+GGTDKTLFINRTSSE
Subjt: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
Query: LIVAQIYIDEYYIWG
LIVAQIY+D+ G
Subjt: LIVAQIYIDEYYIWG
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| TYK29824.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 3.9e-41 | 74.78 | Show/hide |
Query: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
+K + LL + Y+MDVKSAFLN YLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWY+RLTIYL DKGYS+ GT KTLFINRTSSE
Subjt: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
Query: LIVAQIYIDEYYIWG
LI+AQIY+D+ G
Subjt: LIVAQIYIDEYYIWG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SXM5 Putative gag-pol polyprotein | 9.4e-41 | 85.71 | Show/hide |
Query: YRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWGI
Y+MDVKSAFLN YLNEEVFVAQPKGFVDSEFP HVYKLNKALYGLKQAPRAWYERLTIYL DKGYS+ GT KTLFINRTSSELI+AQIY+D+ I+G+
Subjt: YRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWGI
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| A0A5A7T2Q0 Gag-pol polyprotein | 3.9e-39 | 69.57 | Show/hide |
Query: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
++ + LL + F +RMDVKSAFLN YLNEEV+VAQPKGFVDSEFPQ+VYKLNKALYGLKQAPRAWYERLT+YL ++GYS+G T++TLFINRTS++
Subjt: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
Query: LIVAQIYIDEYYIWG
LIVAQIY+D+ G
Subjt: LIVAQIYIDEYYIWG
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| A0A5A7TCA8 Gag-pol polyprotein | 3.9e-39 | 81.44 | Show/hide |
Query: YRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWG
Y+MD+KSAFLN YLN+EV+VAQPKGFVDSEFPQHVYKLNKALYGLKQAP+AWYE LTIYL +KGYS+GG DKTLFINRTSS+LIVAQIY+D+ G
Subjt: YRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWG
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| A0A5D3BPJ2 Gag-pol polyprotein | 2.3e-39 | 72.17 | Show/hide |
Query: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
++ + LL + Y+MDVKSAF+N YLNEEVFV QPK V+SEFP+HVYKLNKALYGLKQAPRAWYERLTIYL DKGYS+GGTDKTLFINRTSSE
Subjt: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
Query: LIVAQIYIDEYYIWG
LIVAQIY+D+ G
Subjt: LIVAQIYIDEYYIWG
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| A0A5D3E1T0 Putative gag-pol polyprotein | 1.9e-41 | 74.78 | Show/hide |
Query: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
+K + LL + Y+MDVKSAFLN YLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWY+RLTIYL DKGYS+ GT KTLFINRTSSE
Subjt: MKCLHLLPDLKLFTFCSEYRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSE
Query: LIVAQIYIDEYYIWG
LI+AQIY+D+ G
Subjt: LIVAQIYIDEYYIWG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-10 | 38.14 | Show/hide |
Query: YRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFI--NRTSSELIVAQIYIDEYYI
++MDVK+AFLN L EE+++ P+G S +V KLNKA+YGLKQA R W+E L + + D+ ++I +E I +Y+D+ I
Subjt: YRMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFI--NRTSSELIVAQIYIDEYYI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.0e-15 | 39.6 | Show/hide |
Query: RMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTS-SELIVAQIYIDEYYIWGISQ
++DVK+AFL+ L EE+++ QP+GF + V KLNK+LYGLKQAPR WY + ++ + Y K +D ++ R S + I+ +Y+D+ I G +
Subjt: RMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTS-SELIVAQIYIDEYYIWGISQ
Query: G
G
Subjt: G
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.8e-12 | 36.56 | Show/hide |
Query: MDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYI
MDV +AFLN ++E ++V QP GFV+ P +V++L +YGLKQAP W E + L G+ + + L+ TS I +Y+D+ +
Subjt: MDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.8e-18 | 42.71 | Show/hide |
Query: RMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWG
++DV +AFL L ++V+++QP GF+D + P +V KL KALYGLKQAPRAWY L YL G+ +D +LF+ + ++ +Y+D+ I G
Subjt: RMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.2e-18 | 43.75 | Show/hide |
Query: RMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWG
++DV +AFL L +EV+++QP GFVD + P +V +L KA+YGLKQAPRAWY L YL G+ +D +LF+ + +I +Y+D+ I G
Subjt: RMDVKSAFLNDYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYERLTIYLSDKGYSKGGTDKTLFINRTSSELIVAQIYIDEYYIWG
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