; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc02g0046351 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0046351
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr02:11340391..11341164
RNA-Seq ExpressionCmc02g0046351
SyntenyCmc02g0046351
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032016.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa]2.5e-12284.44Show/hide
Query:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV
        MQNSKK LLPYRY IHLSKEQCPKTPQEV+DMSNIPYA   GSLMY MLC R DICYSVGIVSRYQSNP  DHWT VKNILKY R+TKDYMLV GSKDL+
Subjt:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV

Query:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK
        LTGY+D  FQTDKDARKSTS S FTLNGGAVVWRSIKQSCI DSTMEAEYI ACEA KE +WLKKFLTDLEVVPNMHL ITLYCDNSGA+ NSREPRS+K
Subjt:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK

Query:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL
          KHIERKYH+++EI+HRGDVTVTKISSEQNMADPFTK LT KVFE HL GLGLRGL
Subjt:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL

KAA0058854.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-12385.21Show/hide
Query:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV
        MQNSKK LLPYRY IHLSKEQCPKTPQEV+DMSNIPYAF  GSLMY MLCIRPDICYSV IVS YQSNPG DHWT VKNI+KYLR+TKDYM VYGSKDL+
Subjt:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV

Query:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK
        LT Y+DSDFQTDKDARKSTS S F LNGGAVVWRSIKQSCI DSTME +Y+ ACEA KEAVWLKKFLTDLEVVPNM L ITLYCDNSGA+ANSREPRS+K
Subjt:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK

Query:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL
          KHIERKYH+I++IVHRGDVTVTKISSE+NMADPF KALTAK+FESHL GLGLRGL
Subjt:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL

KAA0063026.1 gag/pol protein [Cucumis melo var. makuwa]3.9e-12385.43Show/hide
Query:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV
        MQNSKKGLL YRYEIHLSKEQCPKTPQ+V+D+SNIPYA T  SLMY MLC RPDICYS+GI+SRYQSNPG DHWTTVKNILKYLR+TKDYMLVYGSKDL+
Subjt:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV

Query:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK
        LTGY+DSDFQTDKD RKSTS S FTLNGG VVWRSIKQSCI +STMEAEY+ ACEA KEAVWLKKFL DLEVVPNMHLSITLYCDNS  + NSREP S+K
Subjt:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK

Query:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGL
        R KHIE+KYHMI++IVHRGDVTVTKISSEQNMADPFTKALTAKVFES+L GLGL
Subjt:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGL

KAA0067716.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-12385.55Show/hide
Query:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV
        MQNSKKGLLPYRY IHLSKEQCPKT Q+VKDMSNIPYA   GSLMY MLC RP+ICYSVGIVSRYQSNPG DHWT VKNILKYLR+TK+YMLVYGSKDL+
Subjt:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV

Query:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK
        LTGY D DFQTDKDARKSTS S FTLNGGAVVWRSIKQSCITDSTME EY+ A EATKEAVWLKKFLTDLEVVPNMH+ ITLYCDNSG +ANSREPRS+K
Subjt:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK

Query:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRG
        R KHIERKYH+I+EIVHRGDVTVTK+ SEQNMA PFTKALT KVF SHL GL LRG
Subjt:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRG

TYK23767.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-12385.21Show/hide
Query:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV
        MQNSKK LLPYRY IHLSKEQCPKTPQEV+DMSNIPYAF  GSLMY MLCIRPDICYSV IVS YQSNPG DHWT VKNI+KYLR+TKDYM VYGSKDL+
Subjt:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV

Query:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK
        LT Y+DSDFQTDKDARKSTS S F LNGGAVVWRSIKQSCI DSTME +Y+ ACEA KEAVWLKKFLTDLEVVPNM L ITLYCDNSGA+ANSREPRS+K
Subjt:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK

Query:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL
          KHIERKYH+I++IVHRGDVTVTKISSE+NMADPF KALTAK+FESHL GLGLRGL
Subjt:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL

TrEMBL top hitse value%identityAlignment
A0A5A7UUR4 Gag/pol protein6.5e-12485.21Show/hide
Query:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV
        MQNSKK LLPYRY IHLSKEQCPKTPQEV+DMSNIPYAF  GSLMY MLCIRPDICYSV IVS YQSNPG DHWT VKNI+KYLR+TKDYM VYGSKDL+
Subjt:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV

Query:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK
        LT Y+DSDFQTDKDARKSTS S F LNGGAVVWRSIKQSCI DSTME +Y+ ACEA KEAVWLKKFLTDLEVVPNM L ITLYCDNSGA+ANSREPRS+K
Subjt:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK

Query:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL
          KHIERKYH+I++IVHRGDVTVTKISSE+NMADPF KALTAK+FESHL GLGLRGL
Subjt:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL

A0A5A7V9B0 Gag/pol protein1.9e-12385.43Show/hide
Query:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV
        MQNSKKGLL YRYEIHLSKEQCPKTPQ+V+D+SNIPYA T  SLMY MLC RPDICYS+GI+SRYQSNPG DHWTTVKNILKYLR+TKDYMLVYGSKDL+
Subjt:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV

Query:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK
        LTGY+DSDFQTDKD RKSTS S FTLNGG VVWRSIKQSCI +STMEAEY+ ACEA KEAVWLKKFL DLEVVPNMHLSITLYCDNS  + NSREP S+K
Subjt:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK

Query:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGL
        R KHIE+KYHMI++IVHRGDVTVTKISSEQNMADPFTKALTAKVFES+L GLGL
Subjt:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGL

A0A5A7VMF5 Gag/pol protein3.2e-12385.55Show/hide
Query:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV
        MQNSKKGLLPYRY IHLSKEQCPKT Q+VKDMSNIPYA   GSLMY MLC RP+ICYSVGIVSRYQSNPG DHWT VKNILKYLR+TK+YMLVYGSKDL+
Subjt:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV

Query:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK
        LTGY D DFQTDKDARKSTS S FTLNGGAVVWRSIKQSCITDSTME EY+ A EATKEAVWLKKFLTDLEVVPNMH+ ITLYCDNSG +ANSREPRS+K
Subjt:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK

Query:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRG
        R KHIERKYH+I+EIVHRGDVTVTK+ SEQNMA PFTKALT KVF SHL GL LRG
Subjt:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRG

A0A5D3CYG9 Retrovirus-related pol polyprotein from transposon tnt 1-941.2e-12284.44Show/hide
Query:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV
        MQNSKK LLPYRY IHLSKEQCPKTPQEV+DMSNIPYA   GSLMY MLC R DICYSVGIVSRYQSNP  DHWT VKNILKY R+TKDYMLV GSKDL+
Subjt:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV

Query:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK
        LTGY+D  FQTDKDARKSTS S FTLNGGAVVWRSIKQSCI DSTMEAEYI ACEA KE +WLKKFLTDLEVVPNMHL ITLYCDNSGA+ NSREPRS+K
Subjt:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK

Query:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL
          KHIERKYH+++EI+HRGDVTVTKISSEQNMADPFTK LT KVFE HL GLGLRGL
Subjt:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL

A0A5D3DJL5 Gag/pol protein6.5e-12485.21Show/hide
Query:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV
        MQNSKK LLPYRY IHLSKEQCPKTPQEV+DMSNIPYAF  GSLMY MLCIRPDICYSV IVS YQSNPG DHWT VKNI+KYLR+TKDYM VYGSKDL+
Subjt:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV

Query:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK
        LT Y+DSDFQTDKDARKSTS S F LNGGAVVWRSIKQSCI DSTME +Y+ ACEA KEAVWLKKFLTDLEVVPNM L ITLYCDNSGA+ANSREPRS+K
Subjt:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK

Query:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL
          KHIERKYH+I++IVHRGDVTVTKISSE+NMADPF KALTAK+FESHL GLGLRGL
Subjt:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.0e-3336.03Show/hide
Query:  YEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV----LTGYSDSD
        YE+  S E C           N P     G LMY+MLC RPD+  +V I+SRY S    + W  +K +L+YL+ T D  L++  K+L     + GY DSD
Subjt:  YEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV----LTGYSDSD

Query:  FQTDKDARKSTSRSFFTL-NGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYKREKHIER
        +   +  RKST+   F + +   + W + +Q+ +  S+ EAEY+   EA +EA+WLK  LT + +   +   I +Y DN G I+ +  P  +KR KHI+ 
Subjt:  FQTDKDARKSTSRSFFTL-NGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYKREKHIER

Query:  KYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGL
        KYH  +E V    + +  I +E  +AD FTK L A  F      LGL
Subjt:  KYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFESHLRGLGL

P0CV72 Secreted RxLR effector protein 1611.2e-2644.36Show/hide
Query:  MSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV-LTGYSDSDFQTDKDARKSTSRSFFTLNGGA
        M N+PY    G++MY+M+  RPD+  +VG++S++ S+P   HW  +K +L+YL+ T+ Y L +       L GYSD+D+  D ++R+STS   F LNGG 
Subjt:  MSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV-LTGYSDSDFQTDKDARKSTSRSFFTLNGGA

Query:  VVWRSIKQSCITDSTMEAEYIVACEATKEAVWL
        V WRS KQ  +  S+ E EY+   EAT+EAVWL
Subjt:  VVWRSIKQSCITDSTMEAEYIVACEATKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-946.8e-5443.9Show/hide
Query:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV
        M+N+K    P    + LSK+ CP T +E  +M+ +PY+   GSLMY M+C RPDI ++VG+VSR+  NPG +HW  VK IL+YLR T    L +G  D +
Subjt:  MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLV

Query:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK
        L GY+D+D   D D RKS++   FT +GGA+ W+S  Q C+  ST EAEYI A E  KE +WLK+FL +L +    ++   +YCD+  AI  S+    + 
Subjt:  LTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYK

Query:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFE
        R KHI+ +YH I+E+V    + V KIS+ +N AD  TK +    FE
Subjt:  REKHIERKYHMIKEIVHRGDVTVTKISSEQNMADPFTKALTAKVFE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.6e-2332.42Show/hide
Query:  YAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDY-MLVYGSKDLVLTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRS
        Y    GSL Y+    RPDI Y+V  +S++   P  +H   +K IL+YL  T ++ + +     L L  YSD+D+  DKD   ST+     L    + W S
Subjt:  YAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDY-MLVYGSKDLVLTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRS

Query:  IKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYKREKHIERKYHMIKEIVHRGDVTVTKISSEQNMADP
         KQ  +  S+ EAEY      + E  W+   LT+L +   +     +YCDN GA      P  + R KHI   YH I+  V  G + V  +S+   +AD 
Subjt:  IKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYKREKHIERKYHMIKEIVHRGDVTVTKISSEQNMADP

Query:  FTKALTAKVFESHLRGLGL
         TK L+   F++    +G+
Subjt:  FTKALTAKVFESHLRGLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.7e-2633.33Show/hide
Query:  YAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDY-MLVYGSKDLVLTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRS
        Y    GSL Y+    RPD+ Y+V  +S+Y   P  DHW  +K +L+YL  T D+ + +     L L  YSD+D+  D D   ST+     L    + W S
Subjt:  YAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDY-MLVYGSKDLVLTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRS

Query:  IKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYKREKHIERKYHMIKEIVHRGDVTVTKISSEQNMADP
         KQ  +  S+ EAEY      + E  W+   LT+L +   +     +YCDN GA      P  + R KHI   YH I+  V  G + V  +S+   +AD 
Subjt:  IKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYKREKHIERKYHMIKEIVHRGDVTVTKISSEQNMADP

Query:  FTKALTAKVFESHLRGLGL
         TK L+   F++  R +G+
Subjt:  FTKALTAKVFESHLRGLGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.7e-2033.52Show/hide
Query:  YAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSK-DLVLTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRS
        Y    G LMY+ +  R DI ++V  +S++   P   H   V  IL Y++ T    L Y S+ ++ L  +SD+ FQ+ KD R+ST+     L    + W+S
Subjt:  YAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSK-DLVLTGYSDSDFQTDKDARKSTSRSFFTLNGGAVVWRS

Query:  IKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYKREKHIERKYHMIKE
         KQ  ++ S+ EAEY     AT E +WL +F  +L++   +     L+CDN+ AI  +     ++R KHIE   H ++E
Subjt:  IKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYKREKHIERKYHMIKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAATTCTAAAAAGGGTCTGTTGCCGTACAGATATGAAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTAAGGATATGAGTAACATTCCCTA
TGCTTTTACTTTTGGGAGCCTGATGTATGTAATGTTATGTATTAGACCTGACATTTGCTACTCAGTGGGGATAGTTAGTAGATATCAGTCCAATCCTGGATGTGATCATT
GGACAACCGTTAAGAATATTCTAAAATATCTTAGAAAAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATTTGGTCCTTACTGGATACAGTGACTCCGATTTTCAA
ACTGATAAAGATGCTAGAAAGTCTACATCAAGGTCATTTTTCACTCTGAATGGAGGAGCAGTAGTGTGGAGAAGCATAAAACAATCCTGTATTACTGACTCCACTATGGA
AGCTGAATATATAGTTGCTTGTGAAGCAACAAAAGAAGCAGTGTGGCTTAAAAAGTTCTTAACAGATTTGGAAGTTGTTCCAAATATGCATCTATCAATCACCTTATACT
GTGACAACAGTGGTGCAATTGCAAATTCACGAGAACCTAGAAGTTATAAACGAGAAAAGCACATTGAACGAAAGTACCATATGATCAAGGAAATCGTACATCGAGGAGAT
GTTACAGTAACAAAAATCTCCTCCGAGCAAAACATGGCTGATCCGTTTACAAAAGCTCTCACGGCTAAAGTGTTTGAGAGCCACTTACGTGGTTTAGGTCTGCGTGGTTT
GTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAATTCTAAAAAGGGTCTGTTGCCGTACAGATATGAAATTCATTTATCAAAAGAACAATGTCCAAAGACACCTCAAGAAGTTAAGGATATGAGTAACATTCCCTA
TGCTTTTACTTTTGGGAGCCTGATGTATGTAATGTTATGTATTAGACCTGACATTTGCTACTCAGTGGGGATAGTTAGTAGATATCAGTCCAATCCTGGATGTGATCATT
GGACAACCGTTAAGAATATTCTAAAATATCTTAGAAAAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATTTGGTCCTTACTGGATACAGTGACTCCGATTTTCAA
ACTGATAAAGATGCTAGAAAGTCTACATCAAGGTCATTTTTCACTCTGAATGGAGGAGCAGTAGTGTGGAGAAGCATAAAACAATCCTGTATTACTGACTCCACTATGGA
AGCTGAATATATAGTTGCTTGTGAAGCAACAAAAGAAGCAGTGTGGCTTAAAAAGTTCTTAACAGATTTGGAAGTTGTTCCAAATATGCATCTATCAATCACCTTATACT
GTGACAACAGTGGTGCAATTGCAAATTCACGAGAACCTAGAAGTTATAAACGAGAAAAGCACATTGAACGAAAGTACCATATGATCAAGGAAATCGTACATCGAGGAGAT
GTTACAGTAACAAAAATCTCCTCCGAGCAAAACATGGCTGATCCGTTTACAAAAGCTCTCACGGCTAAAGTGTTTGAGAGCCACTTACGTGGTTTAGGTCTGCGTGGTTT
GTAA
Protein sequenceShow/hide protein sequence
MQNSKKGLLPYRYEIHLSKEQCPKTPQEVKDMSNIPYAFTFGSLMYVMLCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRKTKDYMLVYGSKDLVLTGYSDSDFQ
TDKDARKSTSRSFFTLNGGAVVWRSIKQSCITDSTMEAEYIVACEATKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAIANSREPRSYKREKHIERKYHMIKEIVHRGD
VTVTKISSEQNMADPFTKALTAKVFESHLRGLGLRGL