| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035157.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.4e-218 | 96.51 | Show/hide |
Query: HNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDE
H RVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDL+SDIKQMNDEEDE
Subjt: HNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDE
Query: TPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFK
TPNMSEVRTTSTVEESKADNSSDS KSLKKS EEIINKKSKLI SAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYIS+IEHSTVDHSA K
Subjt: TPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFK
Query: DEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD
DEYWLNAMQEELL+ RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD
Subjt: DEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD
Query: VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVN
VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLV QIYVDDIIFGGFPQGL
Subjt: VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVN
Query: N
N
Subjt: N
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| KAA0053137.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 9.3e-154 | 70.12 | Show/hide |
Query: EAINTVCHIHNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDI
EA+N CHIHNRV IRTGTT+TLYELWKERKPNVKYFHVFGSTCY+LADREY QKWDARSEQGIFLGYSQNN AY+VYNN+S SVMETINVVINDL+S+I
Subjt: EAINTVCHIHNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDI
Query: KQMNDEEDETPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEH
KQMNDEED+T NM EVRT
Subjt: KQMNDEEDETPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEH
Query: STVDHSAFKDEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCI
+SA KDEYWLN MQEELL+ RNNVW L+ KP GVNVIGTKWIFKNKTDE GCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCI
Subjt: STVDHSAFKDEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCI
Query: QKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIF
QKFKLYQ+DVKS FLNGYLNEEVYVAQPKGFVD EHPKHVYKLNKALYGLKQA AWYDRLTVYLRGRGYSRGEIDK LFI KSDQLLVAQIYVDDIIF
Subjt: QKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIF
Query: GGFPQGLVNNFINIM
GGFP L+NNFINIM
Subjt: GGFPQGLVNNFINIM
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| KAA0066164.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.4e-162 | 82.92 | Show/hide |
Query: REYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKK
REY +KWDA+SEQGIFLGYSQN+ AYRV+NNRS VMETINVVINDL IKQ+NDEEDET NMSE RTTS+VE KA SD KSL+KSS+E I KK
Subjt: REYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKK
Query: SKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFKDEYWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFK
+LISSAHVKKNHPASSIIGDPS GMQTRRK+KIDY+KMVADLCYIS++E STVD SA +DEYWLNAMQEELL+ R NNVW LV KP GVNVIGTKW+FK
Subjt: SKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFKDEYWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFK
Query: NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYG
NKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQKFKLYQMDVKS FL+GYLNEEVYVAQPKGFVD EHPKH+YKLNKALYG
Subjt: NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYG
Query: LKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNNFI
LKQA AWYD+LTVYLRG+GYSRGEIDKTLFI KSDQLLVAQIYVDDIIF GFP LVNNFI
Subjt: LKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNNFI
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| TYJ98791.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.2e-188 | 84.9 | Show/hide |
Query: RVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETP
RVTIR+G TVTL+ELWK+RKPNVKYFHVFGSTCYILADREYRQKWDA+SEQGIFLGYSQN+ AYRV+NNR SVMETINVVIND++S IKQ+NDEEDE P
Subjt: RVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETP
Query: NMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFKDE
NMSE RTTS+V+ +KADN SD K L+KS EE I KKS+LIS AHVKKNHPASSIIGDPSAGMQTRRK+KIDY+KMVADLCYIS+ E STVD S +DE
Subjt: NMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFKDE
Query: YWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVK
Y LNAMQEELL+ RNNVW LVLKP GVNVIGTKW+FKNKTDE GCVTKNKARLVAQGYTQVEG+DFDETF+PVARLEAIRLLLGISCIQKFKLYQMDVK
Subjt: YWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVK
Query: SDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNNF
S FLNGYLNEEVYVAQPK FVD EH KHVYKLNKALYGLKQAP AWYDRLTVYLRG+GYSRGEIDKTLFI KSDQLLVAQIYVDDIIFGGFPQ LVNNF
Subjt: SDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNNF
Query: INIM
I +M
Subjt: INIM
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| TYK29237.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 9.1e-226 | 99.25 | Show/hide |
Query: HNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDE
H RVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDE
Subjt: HNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDE
Query: TPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFK
TPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFK
Subjt: TPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFK
Query: DEYWLNAMQEELLKLRNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDV
DEYWLNAMQEELLKLRNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDV
Subjt: DEYWLNAMQEELLKLRNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDV
Query: KSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNN
KSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGL N
Subjt: KSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T0Q0 Gag-pol polyprotein | 1.2e-218 | 96.51 | Show/hide |
Query: HNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDE
H RVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDL+SDIKQMNDEEDE
Subjt: HNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDE
Query: TPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFK
TPNMSEVRTTSTVEESKADNSSDS KSLKKS EEIINKKSKLI SAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYIS+IEHSTVDHSA K
Subjt: TPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFK
Query: DEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD
DEYWLNAMQEELL+ RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD
Subjt: DEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD
Query: VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVN
VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLV QIYVDDIIFGGFPQGL
Subjt: VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVN
Query: N
N
Subjt: N
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| A0A5D3BJA9 Gag-pol polyprotein | 5.6e-189 | 84.9 | Show/hide |
Query: RVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETP
RVTIR+G TVTL+ELWK+RKPNVKYFHVFGSTCYILADREYRQKWDA+SEQGIFLGYSQN+ AYRV+NNR SVMETINVVIND++S IKQ+NDEEDE P
Subjt: RVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETP
Query: NMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFKDE
NMSE RTTS+V+ +KADN SD K L+KS EE I KKS+LIS AHVKKNHPASSIIGDPSAGMQTRRK+KIDY+KMVADLCYIS+ E STVD S +DE
Subjt: NMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFKDE
Query: YWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVK
Y LNAMQEELL+ RNNVW LVLKP GVNVIGTKW+FKNKTDE GCVTKNKARLVAQGYTQVEG+DFDETF+PVARLEAIRLLLGISCIQKFKLYQMDVK
Subjt: YWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVK
Query: SDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNNF
S FLNGYLNEEVYVAQPK FVD EH KHVYKLNKALYGLKQAP AWYDRLTVYLRG+GYSRGEIDKTLFI KSDQLLVAQIYVDDIIFGGFPQ LVNNF
Subjt: SDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNNF
Query: INIM
I +M
Subjt: INIM
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| A0A5D3BPB3 Gag-pol polyprotein | 4.5e-154 | 70.12 | Show/hide |
Query: EAINTVCHIHNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDI
EA+N CHIHNRV IRTGTT+TLYELWKERKPNVKYFHVFGSTCY+LADREY QKWDARSEQGIFLGYSQNN AY+VYNN+S SVMETINVVINDL+S+I
Subjt: EAINTVCHIHNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDI
Query: KQMNDEEDETPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEH
KQMNDEED+T NM EVRT
Subjt: KQMNDEEDETPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEH
Query: STVDHSAFKDEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCI
+SA KDEYWLN MQEELL+ RNNVW L+ KP GVNVIGTKWIFKNKTDE GCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCI
Subjt: STVDHSAFKDEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCI
Query: QKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIF
QKFKLYQ+DVKS FLNGYLNEEVYVAQPKGFVD EHPKHVYKLNKALYGLKQA AWYDRLTVYLRGRGYSRGEIDK LFI KSDQLLVAQIYVDDIIF
Subjt: QKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIF
Query: GGFPQGLVNNFINIM
GGFP L+NNFINIM
Subjt: GGFPQGLVNNFINIM
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| A0A5D3CXU0 Gag-pol polyprotein | 6.9e-163 | 82.92 | Show/hide |
Query: REYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKK
REY +KWDA+SEQGIFLGYSQN+ AYRV+NNRS VMETINVVINDL IKQ+NDEEDET NMSE RTTS+VE KA SD KSL+KSS+E I KK
Subjt: REYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKK
Query: SKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFKDEYWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFK
+LISSAHVKKNHPASSIIGDPS GMQTRRK+KIDY+KMVADLCYIS++E STVD SA +DEYWLNAMQEELL+ R NNVW LV KP GVNVIGTKW+FK
Subjt: SKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFKDEYWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFK
Query: NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYG
NKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQKFKLYQMDVKS FL+GYLNEEVYVAQPKGFVD EHPKH+YKLNKALYG
Subjt: NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYG
Query: LKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNNFI
LKQA AWYD+LTVYLRG+GYSRGEIDKTLFI KSDQLLVAQIYVDDIIF GFP LVNNFI
Subjt: LKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNNFI
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| A0A5D3DZD2 Gag-pol polyprotein | 4.4e-226 | 99.25 | Show/hide |
Query: HNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDE
H RVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDE
Subjt: HNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDE
Query: TPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFK
TPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFK
Subjt: TPNMSEVRTTSTVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFK
Query: DEYWLNAMQEELLKLRNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDV
DEYWLNAMQEELLKLRNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDV
Subjt: DEYWLNAMQEELLKLRNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDV
Query: KSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNN
KSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGL N
Subjt: KSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGLVNN
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 3.8e-41 | 26.36 | Show/hide |
Query: ARVMIHTKNVPLCFWAEAINTVCHIHNRVTIR--TGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRS
AR M+ + FW EA+ T ++ NR+ R ++ T YE+W +KP +K+ VFG+T Y+ + + K+D +S + IF+GY N +++++ +
Subjt: ARVMIHTKNVPLCFWAEAINTVCHIHNRVTIR--TGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRS
Query: DSVMETINVVINDLN--------------SDIKQMNDEEDETPNMSEVRTTSTVEESKADN------SSDSPEKSLKKSSEEII----------------
+ + +VV+++ N D K+ ++ + ++T E + DN S +S K+ S +II
Subjt: DSVMETINVVINDLN--------------SDIKQMNDEEDETPNMSEVRTTSTVEESKADN------SSDSPEKSLKKSSEEII----------------
Query: ---------------------------------NKKSKLISSAHVKK---NHPASS----IIGDPSAGMQTRRKDKIDY-------LKMVADLCYISSIE
N+ + ++ H+K+ ++P + II S ++T K +I Y K+V + I +
Subjt: ---------------------------------NKKSKLISSAHVKK---NHPASS----IIGDPSAGMQTRRKDKIDY-------LKMVADLCYISSIE
Query: HSTVDHSAFKDE--YWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGI
++ D ++D+ W A+ EL + NN W + +P N++ ++W+F K +E+G + KARLVA+G+TQ +D++ETFAPVAR+ + R +L +
Subjt: HSTVDHSAFKDE--YWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGI
Query: SCIQKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKS--DQLLVAQIYV
K++QMDVK+ FLNG L EE+Y+ P+G + +V KLNKA+YGLKQA W++ L+ + +D+ ++I K ++ + +YV
Subjt: SCIQKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKS--DQLLVAQIYV
Query: DDIIFGGFPQGLVNNF
DD++ +NNF
Subjt: DDIIFGGFPQGLVNNF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-43 | 29 | Show/hide |
Query: RVMIHTKNVPLCFWAEAINTVCHIHNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSV
R M+ +P FW EA+ T C++ NR +W ++ + + VFG + +E R K D +S IF+GY + YR+++ V
Subjt: RVMIHTKNVPLCFWAEAINTVCHIHNRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYSQNNWAYRVYNNRSDSV
Query: METINVVINDLNSDIKQMNDEEDET-----PNMSEVRTTS---TVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASS------IIGDP
+ + +VV + S+++ D ++ PN + +TS T ES D S+ E+ E+I + +L + HP +
Subjt: METINVVINDLNSDIKQMNDEEDET-----PNMSEVRTTS---TVEESKADNSSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASS------IIGDP
Query: SAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFKDEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYT
+++RR +Y+ +++D S++ + H + + AMQEE+ L +N + LV P G + KW+FK K D + + KARLV +G+
Subjt: SAGMQTRRKDKIDYLKMVADLCYISSIEHSTVDHSAFKDEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYT
Query: QVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYS
Q +G+DFDE F+PV ++ +IR +L ++ ++ Q+DVK+ FL+G L EE+Y+ QP+GF V KLNK+LYGLKQAP WY + +++ + Y
Subjt: QVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYS
Query: RGEIDKTLFIDSKSD-QLLVAQIYVDDIIFGGFPQGLV
+ D ++ S+ ++ +YVDD++ G +GL+
Subjt: RGEIDKTLFIDSKSD-QLLVAQIYVDDIIFGGFPQGLV
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 3.8e-17 | 42.4 | Show/hide |
Query: MQTRRKDKIDYLKMVADLCYISSIEHSTVD-HSAFKDEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQV
M TR K I+ L L ++I+ A KD W AMQEEL L RN W+LV PV N++G KW+FK K G + + KARLVA+G+ Q
Subjt: MQTRRKDKIDYLKMVADLCYISSIEHSTVD-HSAFKDEYWLNAMQEELLKL-RNNVWMLVLKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQV
Query: EGVDFDETFAPVARLEAIRLLLGIS
EG+ F ET++PV R IR +L ++
Subjt: EGVDFDETFAPVARLEAIRLLLGIS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.9e-42 | 41.83 | Show/hide |
Query: AFKDEYWLNAMQEEL-LKLRNNVWMLVLKPVG-VNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKL
A KDE W NAM E+ ++ N+ W LV P V ++G +WIF K + G + + KARLVA+GY Q G+D+ ETF+PV + +IR++LG++ + + +
Subjt: AFKDEYWLNAMQEEL-LKLRNNVWMLVLKPVG-VNVIGTKWIFKNKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKL
Query: YQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQ
Q+DV + FL G L ++VY++QP GF+D + P +V KL KALYGLKQAP AWY L YL G+ D +LF+ + ++ +YVDDI+ G
Subjt: YQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGYSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQ
Query: GLVNNFIN
L++N ++
Subjt: GLVNNFIN
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-40 | 39.66 | Show/hide |
Query: MQTRRKDKIDYLKMVADLCYISSIEHSTVDHS---AFKDEYWLNAMQEEL-LKLRNNVWMLV-LKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGY
M TR KD I K Y +S+ ++ + A KD+ W AM E+ ++ N+ W LV P V ++G +WIF K + G + + KARLVA+GY
Subjt: MQTRRKDKIDYLKMVADLCYISSIEHSTVDHS---AFKDEYWLNAMQEEL-LKLRNNVWMLV-LKPVGVNVIGTKWIFKNKTDEIGCVTKNKARLVAQGY
Query: TQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGY
Q G+D+ ETF+PV + +IR++LG++ + + + Q+DV + FL G L +EVY++QP GFVD + P +V +L KA+YGLKQAP AWY L YL G+
Subjt: TQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMDVKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRGY
Query: SRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGG
D +LF+ + ++ +YVDDI+ G
Subjt: SRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGG
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