| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0046768.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-96 | 89.71 | Show/hide |
Query: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
QFQMK LGNAQYVLGIQIV N KNKTLAMSQTSYIDKMLSRYKM NSKKGLLPYRYGI LSKEQCPKTPQEVEDMSNIPYASA+GSLMY MLCTRP+ICY
Subjt: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
Query: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
S+GIVSRYQS PRRDHWT VKNILKY RRTKDYMLVYGSKDLILTGYTD FQTDKDARKST G VFT+N AVVWRSIKQSCIADSTMEA YVAACEA+
Subjt: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
Query: KEAV
KEAV
Subjt: KEAV
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| KAA0050040.1 gag/pol protein [Cucumis melo var. makuwa] | 1.5e-101 | 97.4 | Show/hide |
Query: VLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYSIGIVSRYQSKP
++G +VWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYSIGIVSRYQSKP
Subjt: VLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYSIGIVSRYQSKP
Query: RRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAAKEAV
RRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAAKEAV
Subjt: RRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAAKEAV
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| KAA0062742.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-95 | 88.73 | Show/hide |
Query: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
QFQMKDLGNAQYVLGIQIV N+KNKTLAMSQTSYIDKMLSRYKM NSKKGLLPY YGIHLSKEQCPKTP EVEDMSNIPYA AVGSLMY MLCTRP+ICY
Subjt: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
Query: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
S+ I SRYQS PRRDHWT VKNILKYLRRTK+YMLVYGSKDLILTGYTDF FQTDKDARKST G VFT++ AVVWRSIKQSCIADSTMEAEYVA+CEA
Subjt: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
Query: KEAV
KEAV
Subjt: KEAV
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-105 | 95.61 | Show/hide |
Query: MQFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNIC
MQFQMKDLGNAQYVLG+QIV NRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNIC
Subjt: MQFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNIC
Query: YSIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEA
YS+GIVSR QSKP RDHWT VKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMN AVVWRSIKQSCIADSTMEAEYVA CEA
Subjt: YSIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEA
Query: AKEAV
AKEAV
Subjt: AKEAV
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| TYK11050.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-95 | 88.73 | Show/hide |
Query: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
QFQMKDLGNAQYVLGIQIV N KNKTLAMSQTSYIDKMLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASA+GSLMY MLCTR +ICY
Subjt: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
Query: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
S+GIV+RYQS P RDHWT VKNILKYLRRTKDYMLVYGSKDLILTGYTD FQTDKDARKSTSG +FT+N AVVW+SIKQSCIA STMEA+YVAA EAA
Subjt: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
Query: KEAV
KEAV
Subjt: KEAV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TV73 Gag/pol protein | 9.2e-97 | 89.71 | Show/hide |
Query: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
QFQMK LGNAQYVLGIQIV N KNKTLAMSQTSYIDKMLSRYKM NSKKGLLPYRYGI LSKEQCPKTPQEVEDMSNIPYASA+GSLMY MLCTRP+ICY
Subjt: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
Query: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
S+GIVSRYQS PRRDHWT VKNILKY RRTKDYMLVYGSKDLILTGYTD FQTDKDARKST G VFT+N AVVWRSIKQSCIADSTMEA YVAACEA+
Subjt: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
Query: KEAV
KEAV
Subjt: KEAV
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| A0A5A7U428 Gag/pol protein | 7.2e-102 | 97.4 | Show/hide |
Query: VLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYSIGIVSRYQSKP
++G +VWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYSIGIVSRYQSKP
Subjt: VLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYSIGIVSRYQSKP
Query: RRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAAKEAV
RRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAAKEAV
Subjt: RRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAAKEAV
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| A0A5D3BX45 Gag/pol protein | 1.1e-105 | 95.61 | Show/hide |
Query: MQFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNIC
MQFQMKDLGNAQYVLG+QIV NRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNIC
Subjt: MQFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNIC
Query: YSIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEA
YS+GIVSR QSKP RDHWT VKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMN AVVWRSIKQSCIADSTMEAEYVA CEA
Subjt: YSIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEA
Query: AKEAV
AKEAV
Subjt: AKEAV
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| A0A5D3CI71 Gag/pol protein | 5.9e-96 | 88.73 | Show/hide |
Query: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
QFQMKDLGNAQYVLGIQIV N KNKTLAMSQTSYIDKMLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASA+GSLMY MLCTR +ICY
Subjt: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
Query: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
S+GIV+RYQS P RDHWT VKNILKYLRRTKDYMLVYGSKDLILTGYTD FQTDKDARKSTSG +FT+N AVVW+SIKQSCIA STMEA+YVAA EAA
Subjt: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
Query: KEAV
KEAV
Subjt: KEAV
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| A0A5D3DFR5 Gag/pol protein | 5.9e-96 | 88.73 | Show/hide |
Query: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
QFQMKDLGNAQYVLGIQIV N+KNKTLAMSQTSYIDKMLSRYKM NSKKGLLPY YGIHLSKEQCPKTP EVEDMSNIPYA AVGSLMY MLCTRP+ICY
Subjt: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
Query: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
S+ I SRYQS PRRDHWT VKNILKYLRRTK+YMLVYGSKDLILTGYTDF FQTDKDARKST G VFT++ AVVWRSIKQSCIADSTMEAEYVA+CEA
Subjt: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAA
Query: KEAV
KEAV
Subjt: KEAV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.7e-23 | 33.8 | Show/hide |
Query: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLP----YRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRP
+F+M DL ++ +GI+I + + +SQ++Y+ K+LS++ M N P Y + S E C N P S +G LMY+MLCTRP
Subjt: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLP----YRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRP
Query: NICYSIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLI----LTGYTDFYFQTDKDARKSTSGLVFTM-NRVAVVWRSIKQSCIADSTMEA
++ ++ I+SRY SK + W +K +L+YL+ T D L++ K+L + GY D + + RKST+G +F M + + W + +Q+ +A S+ EA
Subjt: NICYSIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLI----LTGYTDFYFQTDKDARKSTSGLVFTM-NRVAVVWRSIKQSCIADSTMEA
Query: EYVAACEAAKEAV
EY+A EA +EA+
Subjt: EYVAACEAAKEAV
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| P0CV72 Secreted RxLR effector protein 161 | 6.5e-23 | 42.75 | Show/hide |
Query: MSNIPYASAVGSLMYVMLCTRPNICYSIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDFYFQTDKDARKSTSGLVFTMNRVA
M N+PY SAVG++MY+M+ TRP++ ++G++S++ S P HW +K +L+YL+ T+ Y L + L GY+D + D ++R+STSG +F +N
Subjt: MSNIPYASAVGSLMYVMLCTRPNICYSIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDFYFQTDKDARKSTSGLVFTMNRVA
Query: VVWRSIKQSCIADSTMEAEYVAACEAAKEAV
V WRS KQ +A S+ E EY+A EA +EAV
Subjt: VVWRSIKQSCIADSTMEAEYVAACEAAKEAV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-47 | 47.78 | Show/hide |
Query: FQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYS
F MKDLG AQ +LG++IV R ++ L +SQ YI+++L R+ M N+K P + LSK+ CP T +E +M+ +PY+SAVGSLMY M+CTRP+I ++
Subjt: FQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYS
Query: IGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAAK
+G+VSR+ P ++HW VK IL+YLR T L +G D IL GYTD D D RKS++G +FT + A+ W+S Q C+A ST EAEY+AA E K
Subjt: IGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEAAK
Query: EAV
E +
Subjt: EAV
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| P25600 Putative transposon Ty5-1 protein YCL074W | 5.5e-14 | 31.53 | Show/hide |
Query: FQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYS
+ MKDLG LG+ I N + +S YI K S +++ K P + SK T ++D++ PY S VG L++ RP+I Y
Subjt: FQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICYS
Query: IGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGS-KDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIK-QSCIADSTMEAEYVAACEA
+ ++SR+ +PR H + +L+YL T+ L Y S L LT Y D D ST G V + V W S K + I + EAEY+ A E
Subjt: IGIVSRYQSKPRRDHWTVVKNILKYLRRTKDYMLVYGS-KDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIK-QSCIADSTMEAEYVAACEA
Query: AKE
E
Subjt: AKE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.8e-16 | 30.05 | Show/hide |
Query: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
+F +K+ + Y LGI+ R + L +SQ Y +L+R M +K P L+ K P E Y VGSL Y+ TRP++ Y
Subjt: QFQMKDLGNAQYVLGIQIVWNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYVMLCTRPNICY
Query: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDY-MLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEA
++ +S+Y P DHW +K +L+YL T D+ + + L L Y+D + D D ST+G + + + W S KQ + S+ EAEY +
Subjt: SIGIVSRYQSKPRRDHWTVVKNILKYLRRTKDY-MLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNRVAVVWRSIKQSCIADSTMEAEYVAACEA
Query: AKE
+ E
Subjt: AKE
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