| GenBank top hits | e value | %identity | Alignment |
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| KAA0025655.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] | 1.5e-65 | 83.56 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDF+EGLPRSRTFDSVLVVVDRLSKYAHF+ L HPFS K VAVEF KEIVRL+GYPRSIV D DQL SHFWKELFRLQGT+LKRSTAY PQTD Q +VV
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVV
NKCL+LYLRCLCQDRP WS+KLA EYWYNTNYHASIKT PYAVV
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVV
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| KAA0032774.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa] | 1.2e-67 | 74.57 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDFVEGLPRSR FDS+ VVVD LSKYAHFI LSHPFS K VA+EFIKEIVRL+GY RSIV D DQL FSHFWKELFRLQGTQLKRST YHPQTD Q +VV
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP---HYLLQSSEHNTKSLGQI
NKCL+LYLRCLCQ+RP TWSEKLA EYWYNTNYH SIKTTPY VVYG P P + LQ ++ K +
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP---HYLLQSSEHNTKSLGQI
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| KAA0034009.1 RNA-directed DNA polymerase (Reverse transcriptase) [Cucumis melo var. makuwa] | 1.3e-66 | 85.03 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDFVEGLPRSRTFDSVLVVVDRLSKYAHFI L HPFS K VAVEFIKEIVRL+GYPRSIVSD D+L SHFWKELF LQGT+LKRS AYHPQTD Q +VV
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVY
NKCL LYLRCLCQDRP TWS+KLA EYWYNTNYHASIKTT YA+VY
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVY
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| KAA0057085.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-65 | 84.35 | Show/hide |
Query: LPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVVNKCLDL
LPRSRTFDSVLVVVDRLSKYAHF+ L HPFS K VAVEFIKEIVRL+GYPRSIVS DQL SHFWKELFRLQGT+ KRSTAYHPQTD Q +VVNKCL+L
Subjt: LPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVVNKCLDL
Query: YLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP
YLRCLCQDRP TWSEKLA EYWYNTNYHASIKTTPYAVVYG P
Subjt: YLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP
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| TYK03080.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.1e-68 | 81.05 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDF+EGLPRSR FDS+LVVVDRLSKYAHF+ HPFS K VA++F KEIVRL+GY RSIVSD DQL SHFWKELFRLQGT+LKRSTAYHPQTD Q +VV
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP
NKCL+LYLRCLCQDRP +WS+KLA EYWYNTNYHASIKTTPYAVVYG AP P
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNK3 Putative retroelement pol polyprotein | 5.8e-68 | 74.57 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDFVEGLPRSR FDS+ VVVD LSKYAHFI LSHPFS K VA+EFIKEIVRL+GY RSIV D DQL FSHFWKELFRLQGTQLKRST YHPQTD Q +VV
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP---HYLLQSSEHNTKSLGQI
NKCL+LYLRCLCQ+RP TWSEKLA EYWYNTNYH SIKTTPY VVYG P P + LQ ++ K +
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP---HYLLQSSEHNTKSLGQI
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| A0A5A7SXV9 RNA-directed DNA polymerase (Reverse transcriptase) | 6.4e-67 | 85.03 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDFVEGLPRSRTFDSVLVVVDRLSKYAHFI L HPFS K VAVEFIKEIVRL+GYPRSIVSD D+L SHFWKELF LQGT+LKRS AYHPQTD Q +VV
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVY
NKCL LYLRCLCQDRP TWS+KLA EYWYNTNYHASIKTT YA+VY
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVY
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| A0A5A7UU61 Ty3-gypsy retrotransposon protein | 7.1e-66 | 84.35 | Show/hide |
Query: LPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVVNKCLDL
LPRSRTFDSVLVVVDRLSKYAHF+ L HPFS K VAVEFIKEIVRL+GYPRSIVS DQL SHFWKELFRLQGT+ KRSTAYHPQTD Q +VVNKCL+L
Subjt: LPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVVNKCLDL
Query: YLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP
YLRCLCQDRP TWSEKLA EYWYNTNYHASIKTTPYAVVYG P
Subjt: YLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP
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| A0A5D3BVC8 Ty3-gypsy retrotransposon protein | 2.0e-68 | 81.05 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDF+EGLPRSR FDS+LVVVDRLSKYAHF+ HPFS K VA++F KEIVRL+GY RSIVSD DQL SHFWKELFRLQGT+LKRSTAYHPQTD Q +VV
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP
NKCL+LYLRCLCQDRP +WS+KLA EYWYNTNYHASIKTTPYAVVYG AP P
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAPTP
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| A0A5D3CMZ9 Transposon Ty3-I Gag-Pol polyprotein | 7.1e-66 | 83.56 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDF+EGLPRSRTFDSVLVVVDRLSKYAHF+ L HPFS K VAVEF KEIVRL+GYPRSIV D DQL SHFWKELFRLQGT+LKRSTAY PQTD Q +VV
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVV
NKCL+LYLRCLCQDRP WS+KLA EYWYNTNYHASIKT PYAVV
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 2.5e-23 | 32.45 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDF+ LP S ++++ VVVDR SK A + + + + A F + ++ +G P+ I++D+D + S WK+ +K S Y PQTD Q +
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAP
N+ ++ LRC+C PNTW + ++ V+ YN H++ + TP+ +V+ +P
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAP
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| P0CT35 Transposon Tf2-2 polyprotein | 2.5e-23 | 32.45 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDF+ LP S ++++ VVVDR SK A + + + + A F + ++ +G P+ I++D+D + S WK+ +K S Y PQTD Q +
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAP
N+ ++ LRC+C PNTW + ++ V+ YN H++ + TP+ +V+ +P
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAP
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| P0CT36 Transposon Tf2-3 polyprotein | 2.5e-23 | 32.45 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDF+ LP S ++++ VVVDR SK A + + + + A F + ++ +G P+ I++D+D + S WK+ +K S Y PQTD Q +
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAP
N+ ++ LRC+C PNTW + ++ V+ YN H++ + TP+ +V+ +P
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAP
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| P0CT41 Transposon Tf2-12 polyprotein | 2.5e-23 | 32.45 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDF+ LP S ++++ VVVDR SK A + + + + A F + ++ +G P+ I++D+D + S WK+ +K S Y PQTD Q +
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAP
N+ ++ LRC+C PNTW + ++ V+ YN H++ + TP+ +V+ +P
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAP
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| Q9UR07 Transposon Tf2-11 polyprotein | 2.5e-23 | 32.45 | Show/hide |
Query: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
MDF+ LP S ++++ VVVDR SK A + + + + A F + ++ +G P+ I++D+D + S WK+ +K S Y PQTD Q +
Subjt: MDFVEGLPRSRTFDSVLVVVDRLSKYAHFIVLSHPFSVKNVAVEFIKEIVRLYGYPRSIVSDHDQLLFSHFWKELFRLQGTQLKRSTAYHPQTDRQIKVV
Query: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAP
N+ ++ LRC+C PNTW + ++ V+ YN H++ + TP+ +V+ +P
Subjt: NKCLDLYLRCLCQDRPNTWSEKLACVEYWYNTNYHASIKTTPYAVVYGTAP
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