; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc02g0048451 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0048451
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr02:13959554..13960243
RNA-Seq ExpressionCmc02g0048451
SyntenyCmc02g0048451
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]8.5e-12294.76Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
        MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHW A+KI+LKYLRRTRDYML+YGAKDLILTGYT+SDFQTDKDS+KSTSGSVFTLN GAV
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
        VWRSIKQGCIADSTME EYVAACE  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK
        I DPFTKTLTAKVFEGHLESLGLRDMYI+
Subjt:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]3.2e-12194.76Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
        MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHW A+KIILKYLRRTRDYML+YGAKDLILTGYTNSDFQTDKDS+KSTS SVFTLN GAV
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
        VWRSIKQGCIADSTME EYVAACE  KEAVWL+KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK
        I DPFTKTLTAKVFEGHLESLGLRDMYI+
Subjt:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK

KAA0042496.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-12194.76Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
        MRRIPYASAVGSLMY MLCTRPDICYAVGIVSRYQSNPGLDHW A+KIILKYLRRTRDYML+YGAKDLILTGYT+SDFQTDKDS+KSTSGSVFTLN GAV
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
        VWRSIKQGCIADSTME EYVAACE  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK
        I DPFTKTLTAKVFEGHLESLGLRDMYI+
Subjt:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]8.5e-12294.76Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
        MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHW A+KI+LKYLRRTRDYML+YGAKDLILTGYT+SDFQTDKDS+KSTSGSVFTLN GAV
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
        VWRSIKQGCIADSTME EYVAACE  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK
        I DPFTKTLTAKVFEGHLESLGLRDMYI+
Subjt:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK

TYK10337.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-127100Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
        MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
        VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK
        IVDPFTKTLTAKVFEGHLESLGLRDMYIK
Subjt:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK

TrEMBL top hitse value%identityAlignment
A0A5A7T2V9 Gag/pol protein1.6e-12194.76Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
        MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHW A+KIILKYLRRTRDYML+YGAKDLILTGYTNSDFQTDKDS+KSTS SVFTLN GAV
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
        VWRSIKQGCIADSTME EYVAACE  KEAVWL+KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK
        I DPFTKTLTAKVFEGHLESLGLRDMYI+
Subjt:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK

A0A5A7TKM4 Gag/pol protein9.2e-12294.76Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
        MRRIPYASAVGSLMY MLCTRPDICYAVGIVSRYQSNPGLDHW A+KIILKYLRRTRDYML+YGAKDLILTGYT+SDFQTDKDS+KSTSGSVFTLN GAV
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
        VWRSIKQGCIADSTME EYVAACE  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK
        I DPFTKTLTAKVFEGHLESLGLRDMYI+
Subjt:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK

A0A5A7TZD0 Gag/pol protein4.1e-12294.76Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
        MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHW A+KI+LKYLRRTRDYML+YGAKDLILTGYT+SDFQTDKDS+KSTSGSVFTLN GAV
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
        VWRSIKQGCIADSTME EYVAACE  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK
        I DPFTKTLTAKVFEGHLESLGLRDMYI+
Subjt:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK

A0A5A7UYE8 Gag/pol protein4.1e-12294.76Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
        MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHW A+KI+LKYLRRTRDYML+YGAKDLILTGYT+SDFQTDKDS+KSTSGSVFTLN GAV
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
        VWRSIKQGCIADSTME EYVAACE  KEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK
        I DPFTKTLTAKVFEGHLESLGLRDMYI+
Subjt:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK

A0A5D3CEF2 Gag/pol protein1.1e-127100Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
        MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
        VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK
        IVDPFTKTLTAKVFEGHLESLGLRDMYIK
Subjt:  IVDPFTKTLTAKVFEGHLESLGLRDMYIK

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.3e-3537.67Show/hide
Query:  PYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYG---AKDLILTGYTNSDFQTDKDSKKSTSGSVFTL-NVGAV
        P  S +G LMY MLCTRPD+  AV I+SRY S    + W  +K +L+YL+ T D  L++    A +  + GY +SD+   +  +KST+G +F + +   +
Subjt:  PYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYG---AKDLILTGYTNSDFQTDKDSKKSTSGSVFTL-NVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
         W + +Q  +A S+ E EY+A  E  +EA+WL+  L  + +   +  PI +Y DN G ++ +  P  HKR KHI+ KYH  RE VQ   + +  I +E+ 
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGL
        + D FTK L A  F    + LGL
Subjt:  IVDPFTKTLTAKVFEGHLESLGL

P0CV72 Secreted RxLR effector protein 1611.7e-2747.37Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMY-GAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGA
        M+ +PY SAVG++MY M+ TRPD+  AVG++S++ S+P   HW A+K +L+YL+ T+ Y L +  A    L GY+++D+  D +S++STSG +F LN G 
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMY-GAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGA

Query:  VVWRSIKQGCIADSTMEVEYVAACEVGKEAVWL
        V WRS KQ  +A S+ E EY+A  E  +EAVWL
Subjt:  VVWRSIKQGCIADSTMEVEYVAACEVGKEAVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-5247.09Show/hide
Query:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV
        M ++PY+SAVGSLMYAM+CTRPDI +AVG+VSR+  NPG +HW A+K IL+YLR T    L +G  D IL GYT++D   D D++KS++G +FT + GA+
Subjt:  MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAV

Query:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN
         W+S  Q C+A ST E EY+AA E GKE +WL++FL +L +         +YCD+  A+  SK    H R KHI+ +YH IRE+V    + V KI++  N
Subjt:  VWRSIKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHN

Query:  IVDPFTKTLTAKVFEGHLESLGL
          D  TK +    FE   E +G+
Subjt:  IVDPFTKTLTAKVFEGHLESLGL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.7e-2733.79Show/hide
Query:  YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDY-MLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAVVWRS
        Y   VGSL Y +  TRPDI YAV  +S++   P  +H  A+K IL+YL  T ++ + +     L L  Y+++D+  DKD   ST+G +  L    + W S
Subjt:  YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDY-MLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAVVWRS

Query:  IKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIVDP
         KQ  +  S+ E EY +      E  W+   L +L +   +  P  +YCDN GA      P  H R KHI   YH IR  VQ G + V  +++   + D 
Subjt:  IKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIVDP

Query:  FTKTLTAKVFEGHLESLGL
         TK L+   F+     +G+
Subjt:  FTKTLTAKVFEGHLESLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.1e-2834.25Show/hide
Query:  YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDY-MLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAVVWRS
        Y   VGSL Y +  TRPD+ YAV  +S+Y   P  DHW A+K +L+YL  T D+ + +     L L  Y+++D+  D D   ST+G +  L    + W S
Subjt:  YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDY-MLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAVVWRS

Query:  IKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIVDP
         KQ  +  S+ E EY +      E  W+   L +L +   ++ P  +YCDN GA      P  H R KHI   YH IR  VQ G + V  +++   + D 
Subjt:  IKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIVDP

Query:  FTKTLTAKVFEGHLESLGL
         TK L+   F+     +G+
Subjt:  FTKTLTAKVFEGHLESLGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.7e-2333.52Show/hide
Query:  YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAK-DLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAVVWRS
        Y   +G LMY  + TR DI +AV  +S++   P L H  A+  IL Y++ T    L Y ++ ++ L  ++++ FQ+ KD+++ST+G    L    + W+S
Subjt:  YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAK-DLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAVVWRS

Query:  IKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE
         KQ  ++ S+ E EY A      E +WL +F  +L++   ++ P  L+CDN+ A+  +     H+R KHIE   H +RE
Subjt:  IKQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIRE

ATMG00810.1 DNA/RNA polymerases superfamily protein2.1e-0929.92Show/hide
Query:  YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDY-MLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAVVWRS
        + S VG+L Y  L TRPDI YAV IV +    P L  +  +K +L+Y++ T  + + ++    L +  + +SD+     +++ST+G    L    + W +
Subjt:  YASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDY-MLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAVVWRS

Query:  IKQGCIADSTMEVEYVAACEVGKEAVW
         +Q  ++ S+ E EY A      E  W
Subjt:  IKQGCIADSTMEVEYVAACEVGKEAVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAG
TCCAACCCAGGGTTAGACCACTGGATGGCGATTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTATGTATGGAGCTAAGGATTTGATCCTT
ACAGGATACACTAACTCTGATTTCCAAACCGATAAGGATTCTAAAAAATCTACGTCGGGATCAGTGTTCACCCTAAATGTGGGAGCTGTAGTATGGCGTAGCATC
AAGCAAGGATGCATTGCAGACTCTACAATGGAGGTTGAATATGTCGCTGCTTGTGAAGTAGGAAAAGAAGCAGTTTGGCTTAGGAAATTCCTACATGATTTGGAA
GTTGTTCCAAACATGAATTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCCCGTAGCCATAAACGAGGGAAACACATAGAG
AGGAAGTATCACTTGATACGGGAGATTGTGCAACGAGGGGATGTAATCGTCACCAAGATTGCTTCGGAGCACAACATTGTTGATCCATTTACGAAGACTCTCACG
GCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAG
TCCAACCCAGGGTTAGACCACTGGATGGCGATTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTATGTATGGAGCTAAGGATTTGATCCTT
ACAGGATACACTAACTCTGATTTCCAAACCGATAAGGATTCTAAAAAATCTACGTCGGGATCAGTGTTCACCCTAAATGTGGGAGCTGTAGTATGGCGTAGCATC
AAGCAAGGATGCATTGCAGACTCTACAATGGAGGTTGAATATGTCGCTGCTTGTGAAGTAGGAAAAGAAGCAGTTTGGCTTAGGAAATTCCTACATGATTTGGAA
GTTGTTCCAAACATGAATTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCCCGTAGCCATAAACGAGGGAAACACATAGAG
AGGAAGTATCACTTGATACGGGAGATTGTGCAACGAGGGGATGTAATCGTCACCAAGATTGCTTCGGAGCACAACATTGTTGATCCATTTACGAAGACTCTCACG
GCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAAGTAA
Protein sequenceShow/hide protein sequence
MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWMAIKIILKYLRRTRDYMLMYGAKDLILTGYTNSDFQTDKDSKKSTSGSVFTLNVGAVVWRSI
KQGCIADSTMEVEYVAACEVGKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIVDPFTKTLT
AKVFEGHLESLGLRDMYIK