| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-287 | 94.55 | Show/hide |
Query: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
MDL FQ+YMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA+LPSSFWGY VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Subjt: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQEN+VFVSTNATFL+EDHMR+HKPRSKL+L+EATDES RVVDEVGPSSRVDETTT GQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Query: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
PRRSGR+ SQPNRYLGL+ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM+LEMESMYFNSVWELVDL EGVKPIGC+WIYKRKRDSAGKVQTFK RLV
Subjt: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
AKGYTQREGVDYEETFSPVAMLKSIRIL SIATFYDYEIWQMDVKTAFLNGNL++SIF+SQPEGFIT+GQEQKVCKLN SIYGLKQASRSWNIRFDTAIK
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Query: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
SYGFDQNVDEPCVYKKINKGKVAFLVLY+DDILLI NDVGYLTDVKAWLAAQFQMKDLGEAQYVLGI+IIRDRKNKTLALSQATYIDK+LVRYSMQNSKK
Subjt: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Query: GLLPFRHGVHLSKE
GLLPFRHGVHLSKE
Subjt: GLLPFRHGVHLSKE
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 5.1e-284 | 93.39 | Show/hide |
Query: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
MDL FQ+YMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA+LPSSFWGY VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Subjt: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+EN+VFVSTNATFL+EDHMR+HKPRSKL+L+EATDES RVVDEVGPSSRVDETTT GQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Query: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
PRRSGR+ SQPNRYLGL+ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM+LEMESMYFNSVWELVDL EGVKPIGC+WIYKRKRDSAGKVQTFK RLV
Subjt: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
AKGYT++EGVDYEETFS VAMLKSIRIL SIA FYDYEIWQMDVKTAFLNGNL++SIF+SQPEGFIT+GQEQKVCKLN SIYGLKQASRSWNIRFDTAIK
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Query: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
SYGFDQNVDEPCVYKKINKGKVAFLVLY+DDILLI NDVGYLTDVKAWLAAQFQMKDLGE QYVLGI+IIRDRKNKTLALSQATYIDK+LVRYSMQNSKK
Subjt: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Query: GLLPFRHGVHLSKE
GLLPFRHGVHLSKE
Subjt: GLLPFRHGVHLSKE
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-287 | 94.55 | Show/hide |
Query: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
MDL FQ+YMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA+LPSSFWGY VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Subjt: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQEN+VFVSTNATFL+EDHMR+HKPRSKL+L+EATDES RVVDEVGPSSRVDETTT GQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Query: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
PRRSGR+ SQPNRYLGL+ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM+LEMESMYFNSVWELVDL EGVKPIGC+WIYKRKRDSAGKVQTFK RLV
Subjt: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
AKGYTQREGVDYEETFSPVAMLKSIRIL SIATFYDYEIWQMDVKTAFLNGNL++SIF+SQPEGFIT+GQEQKVCKLN SIYGLKQASRSWNIRFDTAIK
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Query: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
SYGFDQNVDEPCVYKKINKGKVAFLVLY+DDILLI NDVGYLTDVKAWLAAQFQMKDLGEAQYVLGI+IIRDRKNKTLALSQATYIDK+LVRYSMQNSKK
Subjt: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Query: GLLPFRHGVHLSKE
GLLPFRHGVHLSKE
Subjt: GLLPFRHGVHLSKE
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| TYK10336.1 gag/pol protein [Cucumis melo var. makuwa] | 9.3e-302 | 100 | Show/hide |
Query: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Subjt: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Query: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Subjt: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Query: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Subjt: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Query: GLLPFRHGVHLSKE
GLLPFRHGVHLSKE
Subjt: GLLPFRHGVHLSKE
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 4.3e-283 | 93.19 | Show/hide |
Query: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
MDL FQ+YMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMV SMMSYA+LPSSFWGY VETAVHILNNVPSKSVS+ PFELWRGRKPSLSHFRIWGCPAH
Subjt: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQEN+VFVSTNATFL+EDHMR+HKPRSKL+L+EATDES RVVDEVGPSSRVDETTT GQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Query: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
PRRSGR+ SQPNRYLGL+ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM+LEMESMYFNSVWELVDL EGVKPIGC+WIYKRKRDSAGKVQTFK RLV
Subjt: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
AKGYTQREGVDYEETFSPVAMLKSIRIL SIATFYDYEIWQMDVKTAFLNGNL++SIF+SQPEGFIT+GQEQKVCKLN SIYGLKQASRSWNIRFDTAIK
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Query: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
SYGFDQNVDEPCVYKKINKGKVAFLVLY+DDILLI NDVGYLTDVKAWLAAQFQMKDLGEAQYVLGI+IIRDRKNKTLALSQATYIDKMLVRY MQNSKK
Subjt: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Query: GLLPFRHGVHLSKE
LLPF+HG HLS+E
Subjt: GLLPFRHGVHLSKE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 2.5e-284 | 93.39 | Show/hide |
Query: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
MDL FQ+YMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA+LPSSFWGY VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Subjt: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+EN+VFVSTNATFL+EDHMR+HKPRSKL+L+EATDES RVVDEVGPSSRVDETTT GQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Query: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
PRRSGR+ SQPNRYLGL+ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM+LEMESMYFNSVWELVDL EGVKPIGC+WIYKRKRDSAGKVQTFK RLV
Subjt: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
AKGYT++EGVDYEETFS VAMLKSIRIL SIA FYDYEIWQMDVKTAFLNGNL++SIF+SQPEGFIT+GQEQKVCKLN SIYGLKQASRSWNIRFDTAIK
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Query: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
SYGFDQNVDEPCVYKKINKGKVAFLVLY+DDILLI NDVGYLTDVKAWLAAQFQMKDLGE QYVLGI+IIRDRKNKTLALSQATYIDK+LVRYSMQNSKK
Subjt: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Query: GLLPFRHGVHLSKE
GLLPFRHGVHLSKE
Subjt: GLLPFRHGVHLSKE
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| A0A5A7TZD0 Gag/pol protein | 1.1e-287 | 94.55 | Show/hide |
Query: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
MDL FQ+YMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA+LPSSFWGY VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Subjt: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQEN+VFVSTNATFL+EDHMR+HKPRSKL+L+EATDES RVVDEVGPSSRVDETTT GQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Query: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
PRRSGR+ SQPNRYLGL+ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM+LEMESMYFNSVWELVDL EGVKPIGC+WIYKRKRDSAGKVQTFK RLV
Subjt: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
AKGYTQREGVDYEETFSPVAMLKSIRIL SIATFYDYEIWQMDVKTAFLNGNL++SIF+SQPEGFIT+GQEQKVCKLN SIYGLKQASRSWNIRFDTAIK
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Query: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
SYGFDQNVDEPCVYKKINKGKVAFLVLY+DDILLI NDVGYLTDVKAWLAAQFQMKDLGEAQYVLGI+IIRDRKNKTLALSQATYIDK+LVRYSMQNSKK
Subjt: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Query: GLLPFRHGVHLSKE
GLLPFRHGVHLSKE
Subjt: GLLPFRHGVHLSKE
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| A0A5A7UYE8 Gag/pol protein | 1.1e-287 | 94.55 | Show/hide |
Query: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
MDL FQ+YMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA+LPSSFWGY VETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Subjt: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQEN+VFVSTNATFL+EDHMR+HKPRSKL+L+EATDES RVVDEVGPSSRVDETTT GQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Query: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
PRRSGR+ SQPNRYLGL+ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM+LEMESMYFNSVWELVDL EGVKPIGC+WIYKRKRDSAGKVQTFK RLV
Subjt: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
AKGYTQREGVDYEETFSPVAMLKSIRIL SIATFYDYEIWQMDVKTAFLNGNL++SIF+SQPEGFIT+GQEQKVCKLN SIYGLKQASRSWNIRFDTAIK
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Query: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
SYGFDQNVDEPCVYKKINKGKVAFLVLY+DDILLI NDVGYLTDVKAWLAAQFQMKDLGEAQYVLGI+IIRDRKNKTLALSQATYIDK+LVRYSMQNSKK
Subjt: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Query: GLLPFRHGVHLSKE
GLLPFRHGVHLSKE
Subjt: GLLPFRHGVHLSKE
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| A0A5D3CIZ2 Gag/pol protein | 4.5e-302 | 100 | Show/hide |
Query: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Subjt: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Query: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Subjt: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Query: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Subjt: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Query: GLLPFRHGVHLSKE
GLLPFRHGVHLSKE
Subjt: GLLPFRHGVHLSKE
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| A0A5D3CYF4 Gag/pol protein | 2.1e-283 | 93.19 | Show/hide |
Query: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
MDL FQ+YMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMV SMMSYA+LPSSFWGY VETAVHILNNVPSKSVS+ PFELWRGRKPSLSHFRIWGCPAH
Subjt: MDLTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH
Query: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQEN+VFVSTNATFL+EDHMR+HKPRSKL+L+EATDES RVVDEVGPSSRVDETTT GQSHPSQSLRM
Subjt: VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHMRDHKPRSKLLLNEATDESRRVVDEVGPSSRVDETTTLGQSHPSQSLRM
Query: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
PRRSGR+ SQPNRYLGL+ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAM+LEMESMYFNSVWELVDL EGVKPIGC+WIYKRKRDSAGKVQTFK RLV
Subjt: PRRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLV
Query: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
AKGYTQREGVDYEETFSPVAMLKSIRIL SIATFYDYEIWQMDVKTAFLNGNL++SIF+SQPEGFIT+GQEQKVCKLN SIYGLKQASRSWNIRFDTAIK
Subjt: AKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIK
Query: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
SYGFDQNVDEPCVYKKINKGKVAFLVLY+DDILLI NDVGYLTDVKAWLAAQFQMKDLGEAQYVLGI+IIRDRKNKTLALSQATYIDKMLVRY MQNSKK
Subjt: SYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK
Query: GLLPFRHGVHLSKE
LLPF+HG HLS+E
Subjt: GLLPFRHGVHLSKE
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.7e-70 | 29.78 | Show/hide |
Query: QEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSV---SETPFELWRGRKPSLSHFRIWGCPAHVL
+++ ++ GI L+ P TPQ NGVSER RT+ + R+M+S A+L SFWG V TA +++N +PS+++ S+TP+E+W +KP L H R++G +V
Subjt: QEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSV---SETPFELWRGRKPSLSHFRIWGCPAHVL
Query: VTNPK-KLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHM---RDHKPRSKLLLNEATDE-------SRRVVDEVGP--SSRVDETTTL
+ N + K + +S FVGY E G +D N+ F+ +DE +M R K + L + E SR+++ P S D L
Subjt: VTNPK-KLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHM---RDHKPRSKLLLNEATDE-------SRRVVDEVGP--SSRVDETTTL
Query: GQSHPSQSLRMPRRSGRI--------------------ESQPNRYL-------------------------GLSETQVVIPDDGVEDP------------
S S++ P S +I + N+Y SET + + G+++P
Subjt: GQSHPSQSLRMPRRSGRI--------------------ESQPNRYL-------------------------GLSETQVVIPDDGVEDP------------
Query: ---------LSYKQ--------------AMNDV-----------DKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTR
+SY + NDV DK W +A+N E+ + N+ W + E + RW++ K + G +K R
Subjt: ---------LSYKQ--------------AMNDV-----------DKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTR
Query: LVAKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTA
LVA+G+TQ+ +DYEETF+PVA + S R + S+ Y+ ++ QMDVKTAFLNG LK+ I++ P+G VCKLN +IYGLKQA+R W F+ A
Subjt: LVAKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTA
Query: IKSYGFDQNVDEPCVY--KKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQ
+K F + + C+Y K N + +++LY+DD+++ D+ + + K +L +F+M DL E ++ +GI+I + + + LSQ+ Y+ K+L +++M+
Subjt: IKSYGFDQNVDEPCVY--KKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQ
Query: N
N
Subjt: N
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.4e-104 | 38.59 | Show/hide |
Query: FQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCP--AHV
F+EY HGI+ + + PGTPQ NGV+ER NRT+++ VRSM+ A+LP SFWG V+TA +++N PS ++ E P +W ++ S SH +++GC AHV
Subjt: FQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCP--AHV
Query: LVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHM----RDHKPRSKLLLNEAT--------DESRRVVDEVG-----PSSRVD
KL+ +S C F+GY E G +DP + KV S + F + + K ++ ++ N T + DEV P ++
Subjt: LVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATFLDEDHM----RDHKPRSKLLLNEAT--------DESRRVVDEVG-----PSSRVD
Query: ETTTLGQ-----SHPSQSLRMP---RRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPI
+ L + HP+Q RRS R + RY S V+I DD +P S K+ ++ +K+Q +KAM EMES+ N ++LV+L +G +P+
Subjt: ETTTLGQ-----SHPSQSLRMP---RRSGRIESQPNRYLGLSETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPI
Query: GCRWIYKRKRDSAGKVQTFKTRLVAKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCK
C+W++K K+D K+ +K RLV KG+ Q++G+D++E FSPV + SIR + S+A D E+ Q+DVKTAFL+G+L++ I++ QPEGF G++ VCK
Subjt: GCRWIYKRKRDSAGKVQTFKTRLVAKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCK
Query: LNGSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKN
LN S+YGLKQA R W ++FD+ +KS + + +PCVY K+ ++ L+LY+DD+L++ D G + +K L+ F MKDLG AQ +LG+KI+R+R +
Subjt: LNGSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKN
Query: KTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKE
+ L LSQ YI+++L R++M+N+K P + LSK+
Subjt: KTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLSKE
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| P25600 Putative transposon Ty5-1 protein YCL074W | 2.0e-17 | 34.69 | Show/hide |
Query: MDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGY
MDV TAFLN + + I++ QP GF+ E V +L G +YGLKQA WN + +K GF ++ E +Y + ++ +Y+DD+L+
Subjt: MDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNGSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGY
Query: LTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDK
VK L + MKDLG+ LG+ I N + LS YI K
Subjt: LTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.3e-61 | 27.01 | Show/hide |
Query: EYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVT-
EY +HGI S P TP+ NG+SER++R +++ +++S+A +P ++W Y AV+++N +P+ + E+PF+ G P+ R++GC + +
Subjt: EYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVT-
Query: -NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATF---------------------------------------------LDEDHMRDHKPR
N KL+ +SR C F+GY L Q +++++S + F + H P
Subjt: -NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATF---------------------------------------------LDEDHMRDHKPR
Query: SKLLLNEATDESRRVVD-----------------EVGPSSRVDETTTLGQSHPS-----------------QSLRMPRRSGRIESQPNRYLGLSETQVVI
S + S +D + GP T T Q+H S QSL P +S P S T
Subjt: SKLLLNEATDESRRVVD-----------------EVGPSSRVDETTTLGQSHPS-----------------QSLRMPRRSGRIESQPNRYLGLSETQVVI
Query: PDDGVEDPLSYKQAMND--------------------------------------------VDKDQWVKAMNLEMESMYFNSVWELVDLLEG-VKPIGCR
P + P Q +N+ + ++W AM E+ + N W+LV V +GCR
Subjt: PDDGVEDPLSYKQAMND--------------------------------------------VDKDQWVKAMNLEMESMYFNSVWELVDLLEG-VKPIGCR
Query: WIYKRKRDSAGKVQTFKTRLVAKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNG
WI+ +K +S G + +K RLVAKGY QR G+DY ETFSPV SIRI+ +A + I Q+DV AFL G L +++SQP GFI + + VCKL
Subjt: WIYKRKRDSAGKVQTFKTRLVAKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQEQKVCKLNG
Query: SIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLA
++YGLKQA R+W + + + GF +V + ++ + ++++Y+DDIL+ ND L + L+ +F +KD E Y LGI+ R L
Subjt: SIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLA
Query: LSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLS
LSQ YI +L R +M +K P LS
Subjt: LSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.1e-58 | 25.91 | Show/hide |
Query: LTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHV
+ ++Y+ +HGI S P TP+ NG+SER++R +++M +++S+A +P ++W Y AV+++N +P+ + ++PF+ G+ P+ +++GC +
Subjt: LTFQEYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHV
Query: LVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATF---------------LDEDHMRDHKPR---------------SKLLLNEATDE
+ N KLE +S+ C F+GY L +++ S + F ++ D P + L D
Subjt: LVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENKVFVSTNATF---------------LDEDHMRDHKPR---------------SKLLLNEATDE
Query: SRR------------VVDEVGPSSRVDETTT-------------LGQSHPSQS-------LRMPRRSGRIESQPNRYLGLSETQVVIP------------
S R V PSS + ++ Q H +Q+ L P + + PN+ L ++ + P
Subjt: SRR------------VVDEVGPSSRVDETTT-------------LGQSHPSQS-------LRMPRRSGRIESQPNRYLGLSETQVVIP------------
Query: ----------------------------------------DDGVEDP---LSY----------KQAMNDVDKDQWVKAMNLEMESMYFNSVWELV-DLLE
DG+ P SY + A+ + D+W +AM E+ + N W+LV
Subjt: ----------------------------------------DDGVEDP---LSY----------KQAMNDVDKDQWVKAMNLEMESMYFNSVWELV-DLLE
Query: GVKPIGCRWIYKRKRDSAGKVQTFKTRLVAKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQE
V +GCRWI+ +K +S G + +K RLVAKGY QR G+DY ETFSPV SIRI+ +A + I Q+DV AFL G L +++SQP GF+ + +
Subjt: GVKPIGCRWIYKRKRDSAGKVQTFKTRLVAKGYTQREGVDYEETFSPVAMLKSIRILFSIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQE
Query: QKVCKLNGSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIR
VC+L +IYGLKQA R+W + T + + GF ++ + ++ + ++++Y+DDIL+ ND L L+ +F +K+ + Y LGI+
Subjt: QKVCKLNGSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIR
Query: DRKNKTLALSQATYIDKMLVRYSMQNSKKGLLP
R + L LSQ Y +L R +M +K P
Subjt: DRKNKTLALSQATYIDKMLVRYSMQNSKKGLLP
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 4.6e-49 | 34.49 | Show/hide |
Query: EDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLVAKGYTQREGVDYEETFSPVAMLKSIRILF
++P +Y +A + W AM+ E+ +M WE+ L KPIGC+W+YK K +S G ++ +K RLVAKGYTQ+EG+D+ ETFSPV L S++++
Subjt: EDPLSYKQAMNDVDKDQWVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLVAKGYTQREGVDYEETFSPVAMLKSIRILF
Query: SIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQE----QKVCKLNGSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFL
+I+ Y++ + Q+D+ AFLNG+L + I++ P G+ + VC L SIYGLKQASR W ++F + +GF Q+ + + KI +
Subjt: SIATFYDYEIWQMDVKTAFLNGNLKKSIFLSQPEGFITEGQE----QKVCKLNGSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFL
Query: VLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLS
++Y+DDI++ N+ + ++K+ L + F+++DLG +Y LG++I R + + Q Y +L + K +P V S
Subjt: VLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGVHLS
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 1.2e-09 | 37.8 | Show/hide |
Query: NRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSR
NRT+++ VRSM+ LP +F TAVHI+N PS +++ P E+W P+ S+ R +GC A++ + KL+PR++
Subjt: NRTLLDMVRSMMSYAELPSSFWGYVVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSR
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 3.5e-04 | 38.16 | Show/hide |
Query: FLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSK
+L+LY+DDILL + L + L++ F MKDLG Y LGI+I L LSQ Y +++L M + K
Subjt: FLVLYMDDILLIRNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIKIIRDRKNKTLALSQATYIDKMLVRYSMQNSK
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 4.1e-13 | 38.37 | Show/hide |
Query: WVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLVAKGYTQREGVDYEETFSPVAMLKSIRILFSIA
W +AM E++++ N W LV +GC+W++K K S G + K RLVAKG+ Q EG+ + ET+SPV +IR + ++A
Subjt: WVKAMNLEMESMYFNSVWELVDLLEGVKPIGCRWIYKRKRDSAGKVQTFKTRLVAKGYTQREGVDYEETFSPVAMLKSIRILFSIA
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