| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-113 | 97.14 | Show/hide |
Query: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
MPRRSGRVVSQPNRYLGL ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYK+KRDSAGKVQTFK RL
Subjt: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT+FLNGNLEESIFMSQ EGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQNID
KSYGFDQN+D
Subjt: KSYGFDQNID
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-111 | 95.24 | Show/hide |
Query: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
MPRRSGRVVSQPNRYLGL ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYK+KRDSAGKVQTFK RL
Subjt: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
VAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKT+FLNGNLEESIFMSQ EGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQNID
KSYGFDQN+D
Subjt: KSYGFDQNID
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-113 | 97.14 | Show/hide |
Query: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
MPRRSGRVVSQPNRYLGL ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYK+KRDSAGKVQTFK RL
Subjt: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT+FLNGNLEESIFMSQ EGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQNID
KSYGFDQN+D
Subjt: KSYGFDQNID
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-113 | 97.14 | Show/hide |
Query: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
MPRRSGRVVSQPNRYLGL ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYK+KRDSAGKVQTFK RL
Subjt: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT+FLNGNLEESIFMSQ EGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQNID
KSYGFDQN+D
Subjt: KSYGFDQNID
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| TYK28885.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-111 | 95.24 | Show/hide |
Query: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
MPRRSGRVVSQPNRYLGL ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKA+DLEMESMYFNSVWELVDLPEGVKPIGCKWIYK+KRDSAGKVQTFK RL
Subjt: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT+FLNGNLEESIF+SQ +GFITQGQEQKVCKLNRSIYGLKQASRSWNIRF TAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQNID
KSYGFDQN+D
Subjt: KSYGFDQNID
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 1.8e-111 | 95.24 | Show/hide |
Query: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
MPRRSGRVVSQPNRYLGL ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYK+KRDSAGKVQTFK RL
Subjt: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
VAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKT+FLNGNLEESIFMSQ EGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQNID
KSYGFDQN+D
Subjt: KSYGFDQNID
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| A0A5A7TZD0 Gag/pol protein | 6.5e-114 | 97.14 | Show/hide |
Query: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
MPRRSGRVVSQPNRYLGL ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYK+KRDSAGKVQTFK RL
Subjt: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT+FLNGNLEESIFMSQ EGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQNID
KSYGFDQN+D
Subjt: KSYGFDQNID
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| A0A5A7UYE8 Gag/pol protein | 6.5e-114 | 97.14 | Show/hide |
Query: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
MPRRSGRVVSQPNRYLGL ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYK+KRDSAGKVQTFK RL
Subjt: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT+FLNGNLEESIFMSQ EGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQNID
KSYGFDQN+D
Subjt: KSYGFDQNID
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| A0A5D3CYF4 Gag/pol protein | 6.5e-114 | 97.14 | Show/hide |
Query: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
MPRRSGRVVSQPNRYLGL ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYK+KRDSAGKVQTFK RL
Subjt: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT+FLNGNLEESIFMSQ EGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQNID
KSYGFDQN+D
Subjt: KSYGFDQNID
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| A0A5D3DZX8 Gag/pol protein | 1.8e-111 | 95.24 | Show/hide |
Query: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
MPRRSGRVVSQPNRYLGL ETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKA+DLEMESMYFNSVWELVDLPEGVKPIGCKWIYK+KRDSAGKVQTFK RL
Subjt: MPRRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT+FLNGNLEESIF+SQ +GFITQGQEQKVCKLNRSIYGLKQASRSWNIRF TAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAI
Query: KSYGFDQNID
KSYGFDQN+D
Subjt: KSYGFDQNID
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.4e-33 | 39.88 | Show/hide |
Query: PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRLVAKGYTQREGVDYEETFSPVAMLKSIRILLSI
P S+ + DK W +A++ E+ + N+ W + PE + +W++ K + G +K RLVA+G+TQ+ +DYEETF+PVA + S R +LS+
Subjt: PLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRLVAKGYTQREGVDYEETFSPVAMLKSIRILLSI
Query: ATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGF
Y+ ++ QMDVKT+FLNG L+E I+M +G VCKLN++IYGLKQA+R W F+ A+K F
Subjt: ATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.8e-47 | 47 | Show/hide |
Query: RRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRLVA
RRS R + RY V+I DD +P S K+ ++ +K+Q +KAM EMES+ N ++LV+LP+G +P+ CKW++K K+D K+ +K RLV
Subjt: RRSGRVVSQPNRYLGLIETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRLVA
Query: KGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS
KG+ Q++G+D++E FSPV + SIR +LS+A D E+ Q+DVKT+FL+G+LEE I+M Q EGF G++ VCKLN+S+YGLKQA R W ++FD+ +KS
Subjt: KGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.5e-14 | 41.86 | Show/hide |
Query: WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
W +AM E++++ N W LV P +GCKW++K K S G + K RLVAKG+ Q EG+ + ET+SPV +IR +L++A
Subjt: WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.5e-35 | 41.9 | Show/hide |
Query: DPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKWIYKKKRDSAGKVQTFKVRLVAKGYTQREGVDYEETFSPVAMLKSIRILL
+P + QA+ D ++W AM E+ + N W+LV P V +GC+WI+ KK +S G + +K RLVAKGY QR G+DY ETFSPV SIRI+L
Subjt: DPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKWIYKKKRDSAGKVQTFKVRLVAKGYTQREGVDYEETFSPVAMLKSIRILL
Query: SIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNI
+A + I Q+DV +FL G L + ++MSQ GFI + + VCKL +++YGLKQA R+W + + + GF ++
Subjt: SIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNI
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.0e-36 | 43.58 | Show/hide |
Query: DPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRLVAKGYTQREGVDYEETFSPVAMLKSIRILL
+P + QAM D D+W +AM E+ + N W+LV P V +GC+WI+ KK +S G + +K RLVAKGY QR G+DY ETFSPV SIRI+L
Subjt: DPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCKWIYKKKRDSAGKVQTFKVRLVAKGYTQREGVDYEETFSPVAMLKSIRILL
Query: SIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNI
+A + I Q+DV +FL G L + ++MSQ GF+ + + VC+L ++IYGLKQA R+W + T + + GF +I
Subjt: SIATFYDYEIWQMDVKTSFLNGNLEESIFMSQLEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNI
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