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Cmc02g0049711 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0049711
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase domain-containing protein
Genome locationCMiso1.1chr02:15524824..15532366
RNA-Seq ExpressionCmc02g0049711
SyntenyCmc02g0049711
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032946.1 uncharacterized protein E6C27_scaffold269G00200 [Cucumis melo var. makuwa]3.0e-2590.62Show/hide
Query:  KTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ
        KTGQLVFTRNQ VSGF+CISECI GVRISIW+KLKRSCARDSGSGSVLRVIC+YARGI FICLQ
Subjt:  KTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ

KAA0035073.1 uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa]1.5e-2495.08Show/hide
Query:  QLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ
        QLVFTRNQ VSGFSCISECIGGVRISIW+KLKRSCARDSGSGSVLRVICVYARGI FICLQ
Subjt:  QLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ

KAA0042134.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.2e-2693.94Show/hide
Query:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ
        MKKTGQLVFTRNQ VSG SCISECIGGVRISIWDKLKRSCA DSGSGSVLRVICVYARGI FICLQ
Subjt:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ

KAA0043123.1 transposase [Cucumis melo var. makuwa]1.7e-2589.39Show/hide
Query:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ
        ++  GQLVFTRNQ VSGFSCISECIGGVRISIW+KLKRSCARDSGSGSVLRVICVYARGI FICLQ
Subjt:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.4e-2795.45Show/hide
Query:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ
        MKKTGQLVFTRNQ VSGFSCISECIGGVRISIW+KLKRSCARDSGSGSVLRVICVYARGI FICLQ
Subjt:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ

TrEMBL top hitse value%identityAlignment
A0A5A7SSI1 Reverse transcriptase domain-containing protein1.4e-2590.62Show/hide
Query:  KTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ
        KTGQLVFTRNQ VSGF+CISECI GVRISIW+KLKRSCARDSGSGSVLRVIC+YARGI FICLQ
Subjt:  KTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ

A0A5A7SX02 CCHC-type domain-containing protein7.1e-2595.08Show/hide
Query:  QLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ
        QLVFTRNQ VSGFSCISECIGGVRISIW+KLKRSCARDSGSGSVLRVICVYARGI FICLQ
Subjt:  QLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ

A0A5A7TFC5 Reverse transcriptase5.8e-2793.94Show/hide
Query:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ
        MKKTGQLVFTRNQ VSG SCISECIGGVRISIWDKLKRSCA DSGSGSVLRVICVYARGI FICLQ
Subjt:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ

A0A5A7TIE3 Transposase8.4e-2689.39Show/hide
Query:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ
        ++  GQLVFTRNQ VSGFSCISECIGGVRISIW+KLKRSCARDSGSGSVLRVICVYARGI FICLQ
Subjt:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ

A0A5A7UNA3 Reverse transcriptase6.9e-2895.45Show/hide
Query:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ
        MKKTGQLVFTRNQ VSGFSCISECIGGVRISIW+KLKRSCARDSGSGSVLRVICVYARGI FICLQ
Subjt:  MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGAATGTCTCTGGTTTTTCTTGTATTTCAGAGTGTATCGGTGGAGTTAGAATCTCTATTTGGGACAAGTTAAA
GAGGTCGTGTGCGCGCGATTCTGGAAGTGGTTCTGTTTTGAGGGTTATATGTGTTTATGCACGGGGAATCGGATTTATATGTCTTCAGGCCGAGAAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGAATGTCTCTGGTTTTTCTTGTATTTCAGAGTGTATCGGTGGAGTTAGAATCTCTATTTGGGACAAGTTAAA
GAGGTCGTGTGCGCGCGATTCTGGAAGTGGTTCTGTTTTGAGGGTTATATGTGTTTATGCACGGGGAATCGGATTTATATGTCTTCAGGCCGAGAAGAATTAAACCGAGC
TTATAGATCAAGGATCTAGCCCAAGACTGTGAGTGACAAAACCAACTTTGAAATATTTTCCATAATTGTTATTATGATTG
Protein sequenceShow/hide protein sequence
MKKTGQLVFTRNQNVSGFSCISECIGGVRISIWDKLKRSCARDSGSGSVLRVICVYARGIGFICLQAEKN