| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0034962.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-80 | 89.2 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
MSQTSYIDKMLSRYKM NSKKGLL YRYGIHLSKEQC KTPQEVEDMSNILYA VGSLMYAMLCTRPDICY + IVSRYQSN DHWT VKNILKYLR
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
Query: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
R KDYMLVYGSKD ILTGYTDS+FQTDKDARKSTSGSVFTLNGGAVVW SIKQSCI +STMEAEYVAACEAAKE V
Subjt: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| KAA0046766.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-87 | 98.2 | Show/hide |
Query: MLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLRRIKDYMLVY
M + YKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLRRIKDYMLVY
Subjt: MLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLRRIKDYMLVY
Query: GSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
GSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
Subjt: GSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| KAA0050132.1 gag/pol protein [Cucumis melo var. makuwa] | 1.5e-81 | 88.64 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
MSQTSY+DKMLSRYKM+N KK LL YRYGIHLSKEQC KTPQEVEDMSNI YA+ VGSLMYAMLCTRPDICYS+ IVSRYQSN G DHWTA+KNILKYLR
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
Query: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
R KDYMLVYGSKDLIL GYTDS FQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTME EYVAACEAAK+ V
Subjt: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| KAA0058854.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-80 | 87.5 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
MSQTSYIDKMLSRYKM+NSKK LLPYRYGIHLSKEQC KTPQEVEDMSNI YAF +GSLMYAMLC RPDICYS+ IVS YQSN G DHWT VKNI+KYLR
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
Query: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
R KDYM VYGSKDLILT YTDS FQTDKDARKSTSGSVF LNGGAVVWRSIKQSCIADSTME +YVAACEAAKE V
Subjt: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| KAA0063746.1 gag/pol protein [Cucumis melo var. makuwa] | 4.1e-84 | 91.48 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
MSQTSYIDKMLSRYKM+NSKK +LPYRYGIHLSKEQC KTPQEVEDMSNILY VVGSLMYA+LCTRPDICYS+ IVSRYQSN G DHWTAVKNILKYLR
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
Query: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
RIKDYMLVYGSKDLILTGYTDS FQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIA+ TMEAEYVAACEAAKE V
Subjt: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TXS5 Gag/pol protein | 6.7e-88 | 98.2 | Show/hide |
Query: MLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLRRIKDYMLVY
M + YKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLRRIKDYMLVY
Subjt: MLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLRRIKDYMLVY
Query: GSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
GSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
Subjt: GSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| A0A5A7U2R8 Gag/pol protein | 7.1e-82 | 88.64 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
MSQTSY+DKMLSRYKM+N KK LL YRYGIHLSKEQC KTPQEVEDMSNI YA+ VGSLMYAMLCTRPDICYS+ IVSRYQSN G DHWTA+KNILKYLR
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
Query: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
R KDYMLVYGSKDLIL GYTDS FQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTME EYVAACEAAK+ V
Subjt: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| A0A5A7VBE3 Gag/pol protein | 2.0e-84 | 91.48 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
MSQTSYIDKMLSRYKM+NSKK +LPYRYGIHLSKEQC KTPQEVEDMSNILY VVGSLMYA+LCTRPDICYS+ IVSRYQSN G DHWTAVKNILKYLR
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
Query: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
RIKDYMLVYGSKDLILTGYTDS FQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIA+ TMEAEYVAACEAAKE V
Subjt: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| A0A5D3DCF0 Gag/pol protein | 1.0e-80 | 89.2 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
MSQTSYIDKMLSRYKM NSKKGLL YRYGIHLSKEQC KTPQEVEDMSNILYA VGSLMYAMLCTRPDICY + IVSRYQSN DHWT VKNILKYLR
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
Query: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
R KDYMLVYGSKD ILTGYTDS+FQTDKDARKSTSGSVFTLNGGAVVW SIKQSCI +STMEAEYVAACEAAKE V
Subjt: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| A0A5D3DJL5 Gag/pol protein | 1.8e-80 | 87.5 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
MSQTSYIDKMLSRYKM+NSKK LLPYRYGIHLSKEQC KTPQEVEDMSNI YAF +GSLMYAMLC RPDICYS+ IVS YQSN G DHWT VKNI+KYLR
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
Query: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
R KDYM VYGSKDLILT YTDS FQTDKDARKSTSGSVF LNGGAVVWRSIKQSCIADSTME +YVAACEAAKE V
Subjt: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.1e-18 | 32.97 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLP----YRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNIL
+SQ++Y+ K+LS++ M+N P Y + S E C N ++G LMY MLCTRPD+ ++ I+SRY S + W +K +L
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLP----YRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNIL
Query: KYLRRIKDYMLVYGSKDLI----LTGYTDSHFQTDKDARKSTSGSVFTL-NGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
+YL+ D L++ K+L + GY DS + + RKST+G +F + + + W + +Q+ +A S+ EAEY+A EA +E +
Subjt: KYLRRIKDYMLVYGSKDLI----LTGYTDSHFQTDKDARKSTSGSVFTL-NGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| P0CV72 Secreted RxLR effector protein 161 | 3.0e-21 | 41.22 | Show/hide |
Query: MSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLRRIKDYMLVYGSKDLI-LTGYTDSHFQTDKDARKSTSGSVFTLNGGA
M N+ Y VG++MY M+ TRPD+ ++ ++S++ S+ HW A+K +L+YL+ + Y L + L GY+D+ + D ++R+STSG +F LNGG
Subjt: MSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLRRIKDYMLVYGSKDLI-LTGYTDSHFQTDKDARKSTSGSVFTLNGGA
Query: VVWRSIKQSCIADSTMEAEYVAACEAAKEVV
V WRS KQ +A S+ E EY+A EA +E V
Subjt: VVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.0e-40 | 47.73 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
+SQ YI+++L R+ MKN+K P + LSK+ C T +E +M+ + Y+ VGSLMYAM+CTRPDI +++ +VSR+ N G +HW AVK IL+YLR
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
Query: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
L +G D IL GYTD+ D D RKS++G +FT +GGA+ W+S Q C+A ST EAEY+AA E KE++
Subjt: RIKDYMLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEVV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.4e-11 | 30.68 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
+SQ YI +L+R M +K P LS K E Y +VGSL Y + TRPDI Y++ +S++ +H A+K IL+YL
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
Query: RIKDY-MLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEV
++ + + L L Y+D+ + DKD ST+G + L + W S KQ + S+ EAEY + + E+
Subjt: RIKDY-MLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-13 | 30.68 | Show/hide |
Query: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
+SQ Y +L+R M +K P L+ K P E Y +VGSL Y + TRPD+ Y++ +S+Y DHW A+K +L+YL
Subjt: MSQTSYIDKMLSRYKMKNSKKGLLPYRYGIHLSKEQCLKTPQEVEDMSNILYAFVVGSLMYAMLCTRPDICYSMEIVSRYQSNFGCDHWTAVKNILKYLR
Query: RIKDY-MLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEV
D+ + + L L Y+D+ + D D ST+G + L + W S KQ + S+ EAEY + + E+
Subjt: RIKDY-MLVYGSKDLILTGYTDSHFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIADSTMEAEYVAACEAAKEV
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