| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 2.1e-98 | 84.69 | Show/hide |
Query: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
M+LE+ESMY VWTLVD PS+V+PIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKE +DYEETFSP+AM+KSIRILLSIATFY+YEIWQMDVKT FLN
Subjt: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Query: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
GNLEESIYMVQPEGFI + +EQKVCKLQKSIYGLKQASRSWNI FDTAIKSY F++NVDEPCVYK+I+NS+VAFL+LYVDDILLIGNDV +LT++K+WL
Subjt: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
Query: TQFQMKDLG
TQFQMKDLG
Subjt: TQFQMKDLG
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 7.1e-94 | 82.3 | Show/hide |
Query: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
MDLE+ESMY VW LVD P V+PIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+E +DYEETFSP+AM+KSIRILLSIATFYDYEIWQMDVKT FLN
Subjt: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Query: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
GNLEESI+M QPEGFI +G+EQKVCKL +SIYGLKQASRSWNI FDTAIKSY F +NVDEPCVYK+I VAFLVLYVDDILLIGNDVG+LT++K WLA
Subjt: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
Query: TQFQMKDLG
QFQMKDLG
Subjt: TQFQMKDLG
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 9.3e-102 | 89 | Show/hide |
Query: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
MDL++ESMYS VWTLVDQP+ +RPIGCKWIYKRKRDQ KVQTF+ARLVAKGYTQKE IDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKT FLN
Subjt: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Query: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
GNLEESIYMVQPEGFIQKG+EQKVCKLQKSIYGLKQASRSWNI FDT IKSY F++NVDEPCVYKRIINS VAFLVLYVDDILLIGN+V HLT+IKEWL
Subjt: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
Query: TQFQMKDLG
TQFQMKDLG
Subjt: TQFQMKDLG
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-97 | 87.56 | Show/hide |
Query: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
MDLE+ESMYS VWTLVDQP++V+PIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKE IDYEE FS AMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Subjt: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Query: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
NLEESIYMVQPE FIQKG+EQK+CKLQKSIYGLKQASRS NI FDTAIKSY ++NVDEPCVYKRI+NS VAFLVLYVDDILLIGNDVGHL +IK+WLA
Subjt: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
Query: TQFQMKDLG
QFQMKDLG
Subjt: TQFQMKDLG
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 7.1e-94 | 82.3 | Show/hide |
Query: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
MDLE+ESMY VW LVD P V+PIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+E +DYEETFSP+AM+KSIRILLSIATFYDYEIWQMDVKT FLN
Subjt: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Query: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
GNLEESI+M QPEGFI +G+EQKVCKL +SIYGLKQASRSWNI FDTAIKSY F +NVDEPCVYK+I VAFLVLYVDDILLIGNDVG+LT++K WLA
Subjt: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
Query: TQFQMKDLG
QFQMKDLG
Subjt: TQFQMKDLG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 4.5e-102 | 89 | Show/hide |
Query: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
MDL++ESMYS VWTLVDQP+ +RPIGCKWIYKRKRDQ KVQTF+ARLVAKGYTQKE IDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKT FLN
Subjt: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Query: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
GNLEESIYMVQPEGFIQKG+EQKVCKLQKSIYGLKQASRSWNI FDT IKSY F++NVDEPCVYKRIINS VAFLVLYVDDILLIGN+V HLT+IKEWL
Subjt: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
Query: TQFQMKDLG
TQFQMKDLG
Subjt: TQFQMKDLG
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| A0A5A7TZD0 Gag/pol protein | 3.5e-94 | 82.3 | Show/hide |
Query: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
MDLE+ESMY VW LVD P V+PIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+E +DYEETFSP+AM+KSIRILLSIATFYDYEIWQMDVKT FLN
Subjt: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Query: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
GNLEESI+M QPEGFI +G+EQKVCKL +SIYGLKQASRSWNI FDTAIKSY F +NVDEPCVYK+I VAFLVLYVDDILLIGNDVG+LT++K WLA
Subjt: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
Query: TQFQMKDLG
QFQMKDLG
Subjt: TQFQMKDLG
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| A0A5D3BX45 Gag/pol protein | 8.8e-98 | 87.56 | Show/hide |
Query: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
MDLE+ESMYS VWTLVDQP++V+PIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKE IDYEE FS AMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Subjt: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Query: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
NLEESIYMVQPE FIQKG+EQK+CKLQKSIYGLKQASRS NI FDTAIKSY ++NVDEPCVYKRI+NS VAFLVLYVDDILLIGNDVGHL +IK+WLA
Subjt: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
Query: TQFQMKDLG
QFQMKDLG
Subjt: TQFQMKDLG
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| A0A5D3CYF4 Gag/pol protein | 3.5e-94 | 82.3 | Show/hide |
Query: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
MDLE+ESMY VW LVD P V+PIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+E +DYEETFSP+AM+KSIRILLSIATFYDYEIWQMDVKT FLN
Subjt: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Query: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
GNLEESI+M QPEGFI +G+EQKVCKL +SIYGLKQASRSWNI FDTAIKSY F +NVDEPCVYK+I VAFLVLYVDDILLIGNDVG+LT++K WLA
Subjt: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
Query: TQFQMKDLG
QFQMKDLG
Subjt: TQFQMKDLG
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| E2GK51 Gag/pol protein (Fragment) | 1.0e-98 | 84.69 | Show/hide |
Query: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
M+LE+ESMY VWTLVD PS+V+PIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKE +DYEETFSP+AM+KSIRILLSIATFY+YEIWQMDVKT FLN
Subjt: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Query: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
GNLEESIYMVQPEGFI + +EQKVCKLQKSIYGLKQASRSWNI FDTAIKSY F++NVDEPCVYK+I+NS+VAFL+LYVDDILLIGNDV +LT++K+WL
Subjt: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLA
Query: TQFQMKDLG
TQFQMKDLG
Subjt: TQFQMKDLG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.0e-39 | 40.98 | Show/hide |
Query: WTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYMVQPE
WT+ +P + +W++ K ++ G +KARLVA+G+TQK IDYEETF+P+A I S R +LS+ Y+ ++ QMDVKT FLNG L+E IYM P+
Subjt: WTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLNGNLEESIYMVQPE
Query: GFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVY---KRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLATQFQMKDLGM
G VCKL K+IYGLKQA+R W F+ A+K +F + + C+Y K IN + +++LYVDD+++ D+ + K +L +F+M DL
Subjt: GFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVY---KRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWLATQFQMKDLGM
Query: QNMFL
F+
Subjt: QNMFL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-51 | 47.69 | Show/hide |
Query: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
M E+ES+ + LV+ P RP+ CKW++K K+D K+ +KARLV KG+ QK+ ID++E FSP+ + SIR +LS+A D E+ Q+DVKT FL+
Subjt: MDLEVESMYSIFVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFLN
Query: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVY-KRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWL
G+LEE IYM QPEGF GK+ VCKL KS+YGLKQA R W + FD+ +KS + + +PCVY KR + L+LYVDD+L++G D G + ++K L
Subjt: GNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVY-KRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWL
Query: ATQFQMKDLGMQNMFL
+ F MKDLG L
Subjt: ATQFQMKDLGMQNMFL
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.5e-14 | 35.48 | Show/hide |
Query: MDVKTTFLNGNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGH
MDV T FLN ++E IY+ QP GF+ + V +L +YGLKQA WN + +K F R+ E +Y R + ++ +YVDD+L+
Subjt: MDVKTTFLNGNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGH
Query: LTEIKEWLATQFQMKDLGMQNMFL
+K+ L + MKDLG + FL
Subjt: LTEIKEWLATQFQMKDLGMQNMFL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.8e-39 | 38.89 | Show/hide |
Query: MDLEVESMYSIFVWTLV-DQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFL
M E+ + W LV PS V +GC+WI+ +K + G + +KARLVAKGY Q+ +DY ETFSP+ SIRI+L +A + I Q+DV FL
Subjt: MDLEVESMYSIFVWTLV-DQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFL
Query: NGNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWL
G L + +YM QP GFI K + VCKL+K++YGLKQA R+W + + + F +V + ++ + ++++YVDDIL+ GND L + L
Subjt: NGNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWL
Query: ATQFQMKDLGMQNMFL
+ +F +KD + FL
Subjt: ATQFQMKDLGMQNMFL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.4e-38 | 37.98 | Show/hide |
Query: MDLEVESMYSIFVWTLV-DQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFL
M E+ + W LV P V +GC+WI+ +K + G + +KARLVAKGY Q+ +DY ETFSP+ SIRI+L +A + I Q+DV FL
Subjt: MDLEVESMYSIFVWTLV-DQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEVIDYEETFSPIAMIKSIRILLSIATFYDYEIWQMDVKTTFL
Query: NGNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWL
G L + +YM QP GF+ K + VC+L+K+IYGLKQA R+W + T + + F ++ + ++ + ++++YVDDIL+ GND L + L
Subjt: NGNLEESIYMVQPEGFIQKGKEQKVCKLQKSIYGLKQASRSWNIGFDTAIKSYDFKRNVDEPCVYKRIINSIVAFLVLYVDDILLIGNDVGHLTEIKEWL
Query: ATQFQMKD
+ +F +K+
Subjt: ATQFQMKD
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