| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.2e-66 | 84.87 | Show/hide |
Query: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
MLK IRILLSIATFY+YEIWQMDVKTAFLN NLEESIYMVQPEGFI + QEQK+CKLQKSIYGLKQASRSWNIRFDT IKSYGFEQNVDEPCVYK+I+ S
Subjt: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
Query: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
VAF +LYVDDILLI ND+ +LTD+KKWL TQFQMKDL AQY+LGIQIVRN
Subjt: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 1.5e-69 | 89.47 | Show/hide |
Query: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
M+K IRILLSIATFYDYEIWQMDVKTAFLN NLEESIYMVQPEGFIQKGQEQK+CKLQKSIYGLKQASRSWNIRFDT IKSYGFEQNVDEPCVYKRII S
Subjt: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
Query: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
TVAF VLYVDDILLI N++ HLTDIK+WL TQFQMKDL +AQYVLGIQIV+N
Subjt: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
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| KAA0058278.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-65 | 82.89 | Show/hide |
Query: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
MLK IRILLSIATFYDYEIWQMDVKTAFLN+NLEESI+M QPEGFI +GQEQK+CKL +SIYGLKQASRSWNIRFDT IKSYGF+QNVDEPCVYK+I K
Subjt: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
Query: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
VAF VLYVDDILLI ND+G+LTD+K WLA QFQMKDL AQYVLGIQI+R+
Subjt: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-68 | 88.82 | Show/hide |
Query: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
M+K IRILLSIATFYDYEIWQMDVKT FLN NLEESIYMVQPE FIQKGQEQKICKLQKSIYGLKQASRS NIRFDT IKSYG EQNVDEPCVYKRI+ S
Subjt: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
Query: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
TVAF VLYVDDILLI ND+GHL DIKKWLA QFQMKDL NAQYVLG+QIVRN
Subjt: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
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| TYK09500.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-68 | 86.18 | Show/hide |
Query: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
MLK IRILLSIATFYDYEIWQ+DVKTAFLN NLEESIYM QPEGFI+KGQEQKICK QKSIYGLKQASRSWNIRFDT IKSYGFEQNVD+PCVYK+++ S
Subjt: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
Query: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
VAF VLYVDDILL+ ND+G+LTDIKKWLATQFQMKD +AQYVLGIQIVRN
Subjt: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TTA2 Gag/pol protein | 7.1e-70 | 89.47 | Show/hide |
Query: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
M+K IRILLSIATFYDYEIWQMDVKTAFLN NLEESIYMVQPEGFIQKGQEQK+CKLQKSIYGLKQASRSWNIRFDT IKSYGFEQNVDEPCVYKRII S
Subjt: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
Query: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
TVAF VLYVDDILLI N++ HLTDIK+WL TQFQMKDL +AQYVLGIQIV+N
Subjt: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
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| A0A5A7USZ2 Gag/pol protein | 8.1e-66 | 82.89 | Show/hide |
Query: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
MLK IRILLSIATFYDYEIWQMDVKTAFLN+NLEESI+M QPEGFI +GQEQK+CKL +SIYGLKQASRSWNIRFDT IKSYGF+QNVDEPCVYK+I K
Subjt: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
Query: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
VAF VLYVDDILLI ND+G+LTD+K WLA QFQMKDL AQYVLGIQI+R+
Subjt: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
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| A0A5D3BX45 Gag/pol protein | 1.3e-68 | 88.82 | Show/hide |
Query: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
M+K IRILLSIATFYDYEIWQMDVKT FLN NLEESIYMVQPE FIQKGQEQKICKLQKSIYGLKQASRS NIRFDT IKSYG EQNVDEPCVYKRI+ S
Subjt: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
Query: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
TVAF VLYVDDILLI ND+GHL DIKKWLA QFQMKDL NAQYVLG+QIVRN
Subjt: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
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| A0A5D3CDT9 Gag/pol protein | 1.3e-68 | 86.18 | Show/hide |
Query: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
MLK IRILLSIATFYDYEIWQ+DVKTAFLN NLEESIYM QPEGFI+KGQEQKICK QKSIYGLKQASRSWNIRFDT IKSYGFEQNVD+PCVYK+++ S
Subjt: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
Query: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
VAF VLYVDDILL+ ND+G+LTDIKKWLATQFQMKD +AQYVLGIQIVRN
Subjt: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
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| E2GK51 Gag/pol protein (Fragment) | 5.6e-67 | 84.87 | Show/hide |
Query: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
MLK IRILLSIATFY+YEIWQMDVKTAFLN NLEESIYMVQPEGFI + QEQK+CKLQKSIYGLKQASRSWNIRFDT IKSYGFEQNVDEPCVYK+I+ S
Subjt: MLKLIRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKS
Query: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
VAF +LYVDDILLI ND+ +LTD+KKWL TQFQMKDL AQY+LGIQIVRN
Subjt: TVAFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVRN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.2e-21 | 38.1 | Show/hide |
Query: RILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVY---KRIIKSTV
R +LS+ Y+ ++ QMDVKTAFLN L+E IYM P+G +CKL K+IYGLKQA+R W F+ +K F + + C+Y K I +
Subjt: RILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVY---KRIIKSTV
Query: AFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQI
+ +LYVDD+++ D+ + + K++L +F+M DL ++ +GI+I
Subjt: AFSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.7e-33 | 48.65 | Show/hide |
Query: IRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVY-KRIIKSTVA
IR +LS+A D E+ Q+DVKTAFL+ +LEE IYM QPEGF G++ +CKL KS+YGLKQA R W ++FD+ +KS + + +PCVY KR ++
Subjt: IRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVY-KRIIKSTVA
Query: FSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVR
+LYVDD+L++ D G + +K L+ F MKDL AQ +LG++IVR
Subjt: FSVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVR
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.8e-14 | 34.38 | Show/hide |
Query: MDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKSTVAFSVLYVDDILLIRNDIGH
MDV TAFLN ++E IY+ QP GF+ + + +L +YGLKQA WN + +K GF ++ E +Y R + +YVDD+L+
Subjt: MDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKSTVAFSVLYVDDILLIRNDIGH
Query: LTDIKKWLATQFQMKDLRNAQYVLGIQI
+K+ L + MKDL LG+ I
Subjt: LTDIKKWLATQFQMKDLRNAQYVLGIQI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-21 | 36.73 | Show/hide |
Query: IRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKSTVAF
IRI+L +A + I Q+DV AFL L + +YM QP GFI K + +CKL+K++YGLKQA R+W + + + GF +V + ++ ++ +
Subjt: IRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKSTVAF
Query: SVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVR
++YVDDIL+ ND L + L+ +F +KD Y LGI+ R
Subjt: SVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.6e-21 | 35.37 | Show/hide |
Query: IRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKSTVAF
IRI+L +A + I Q+DV AFL L + +YM QP GF+ K + +C+L+K+IYGLKQA R+W + T + + GF ++ + ++ ++ +
Subjt: IRILLSIATFYDYEIWQMDVKTAFLNENLEESIYMVQPEGFIQKGQEQKICKLQKSIYGLKQASRSWNIRFDTLIKSYGFEQNVDEPCVYKRIIKSTVAF
Query: SVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVR
++YVDDIL+ ND L L+ +F +K+ + Y LGI+ R
Subjt: SVLYVDDILLIRNDIGHLTDIKKWLATQFQMKDLRNAQYVLGIQIVR
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