| GenBank top hits | e value | %identity | Alignment |
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-150 | 91.35 | Show/hide |
Query: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
MFR ANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKN LLN+L+D SLPPCESCLEGKMTKRPFTGKGYRAKE LELIHSDLCGPMNVKARGGFEY
Subjt: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
Query: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
FIS IDDYSRYGYLYLMEHKSEALEKFKEYK EVE LLSK+IKILRSDR GEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERRNRTLLD+VRSMMSY
Subjt: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
Query: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
AQL SSFWGYAVETAVHILNNVPSKSVS TPFELWRGRKPSLSHFRIW CPAH+LVTN KK+EP SRLCQFVG KETRGG+FFD QEN
Subjt: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 4.3e-147 | 89.62 | Show/hide |
Query: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
MFR ANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVK+ LLN+L+D SLPPCESCLEGKMTKRPFTGKGYRAKE LELIHSDLCGPMNVKARG FEY
Subjt: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
Query: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
FIS IDDYSRYGYLYLMEHKSEALEKFKEYK EVE LLSK+IKI RSDR GEYMDL FQDYMIEHGIQ QLSA GTPQQNGVSERRNRTLLD+VRSMMSY
Subjt: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
Query: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
AQL SSFWGYAVETAVHILNNVPSKSVS TPFELWRGRKPSLSHFRIW CPAH+LVTN KK+EP SRLCQFVG KETRGG+FFD +EN
Subjt: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
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| KAA0043389.1 gag/pol protein [Cucumis melo var. makuwa] | 1.6e-149 | 98.11 | Show/hide |
Query: RLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKSEALE
+LGHINLDRIGRLVKN LLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKSEALE
Subjt: RLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKSEALE
Query: KFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSFWGYAVETAVHILNNVPSK
KFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSE+RNRTLLDIV SMMSYAQLASSFWGYAVETAVHILNNVPSK
Subjt: KFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSFWGYAVETAVHILNNVPSK
Query: SVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
SVSVTPFELWRGRKPSLSHFRIWSCPAH+LVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
Subjt: SVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
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| KAA0060534.1 gag/pol protein [Cucumis melo var. makuwa] | 6.3e-146 | 88.93 | Show/hide |
Query: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
MFR ANTQNKRQRIS NNNTYLWHLRLGHINLDRIGRLVKN LLN+LEDDSLPPCESCLEGKMTKRPFTGKGYRAKE LELIHSDLCGPMNVKA GGFEY
Subjt: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
Query: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
FIS IDDYS YGYLYL+EHKSEALEKFKEYK EVE LLSK+IKILRSDR GEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERRNRTLLD+V SMMSY
Subjt: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
Query: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
QL SSFWGYAVETAVHILNNVPSK+V TPFELWRGRKPSLSHFRIW CP H+LVTN KK+EP SRLCQFVG KETRGG+FFD QEN
Subjt: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
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| KAA0065386.1 gag/pol protein [Cucumis melo var. makuwa] | 3.8e-143 | 87.89 | Show/hide |
Query: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
MFR ANTQNKRQRISPNN TYLWHLRLGHINLD+IGRLVKN LLN+LEDDSLPPCES LEGKMTKRPF GKGYRAKE LELIHSDL GPMNVKAR GFEY
Subjt: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
Query: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
FIS IDDYSRYGYLYLMEHKSEALEK KEY+ EVE LLS++IKILRSDR GEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERRNRTLLD+VRSMMSY
Subjt: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
Query: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
AQ SSFWGYAVETAVHILNNVPSKSVS PFELWRGRKPSLSHFRIW CP HMLVTN KK+EP SRLCQFVG K+TRGG+FFD QEN
Subjt: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7T2V9 Gag/pol protein | 2.1e-147 | 89.62 | Show/hide |
Query: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
MFR ANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVK+ LLN+L+D SLPPCESCLEGKMTKRPFTGKGYRAKE LELIHSDLCGPMNVKARG FEY
Subjt: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
Query: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
FIS IDDYSRYGYLYLMEHKSEALEKFKEYK EVE LLSK+IKI RSDR GEYMDL FQDYMIEHGIQ QLSA GTPQQNGVSERRNRTLLD+VRSMMSY
Subjt: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
Query: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
AQL SSFWGYAVETAVHILNNVPSKSVS TPFELWRGRKPSLSHFRIW CPAH+LVTN KK+EP SRLCQFVG KETRGG+FFD +EN
Subjt: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
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| A0A5A7TQA5 Gag/pol protein | 7.7e-150 | 98.11 | Show/hide |
Query: RLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKSEALE
+LGHINLDRIGRLVKN LLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKSEALE
Subjt: RLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKSEALE
Query: KFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSFWGYAVETAVHILNNVPSK
KFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSE+RNRTLLDIV SMMSYAQLASSFWGYAVETAVHILNNVPSK
Subjt: KFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSFWGYAVETAVHILNNVPSK
Query: SVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
SVSVTPFELWRGRKPSLSHFRIWSCPAH+LVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
Subjt: SVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
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| A0A5A7TZD0 Gag/pol protein | 1.6e-150 | 91.35 | Show/hide |
Query: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
MFR ANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKN LLN+L+D SLPPCESCLEGKMTKRPFTGKGYRAKE LELIHSDLCGPMNVKARGGFEY
Subjt: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
Query: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
FIS IDDYSRYGYLYLMEHKSEALEKFKEYK EVE LLSK+IKILRSDR GEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERRNRTLLD+VRSMMSY
Subjt: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
Query: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
AQL SSFWGYAVETAVHILNNVPSKSVS TPFELWRGRKPSLSHFRIW CPAH+LVTN KK+EP SRLCQFVG KETRGG+FFD QEN
Subjt: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
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| A0A5A7VGC7 Gag/pol protein | 1.8e-143 | 87.89 | Show/hide |
Query: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
MFR ANTQNKRQRISPNN TYLWHLRLGHINLD+IGRLVKN LLN+LEDDSLPPCES LEGKMTKRPF GKGYRAKE LELIHSDL GPMNVKAR GFEY
Subjt: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
Query: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
FIS IDDYSRYGYLYLMEHKSEALEK KEY+ EVE LLS++IKILRSDR GEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERRNRTLLD+VRSMMSY
Subjt: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
Query: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
AQ SSFWGYAVETAVHILNNVPSKSVS PFELWRGRKPSLSHFRIW CP HMLVTN KK+EP SRLCQFVG K+TRGG+FFD QEN
Subjt: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
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| A0A5D3BNE1 Gag/pol protein | 3.0e-146 | 88.93 | Show/hide |
Query: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
MFR ANTQNKRQRIS NNNTYLWHLRLGHINLDRIGRLVKN LLN+LEDDSLPPCESCLEGKMTKRPFTGKGYRAKE LELIHSDLCGPMNVKA GGFEY
Subjt: MFRIANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEY
Query: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
FIS IDDYS YGYLYL+EHKSEALEKFKEYK EVE LLSK+IKILRSDR GEYMDLRFQDYMIEHGIQ QLSA GTPQQNGVSERRNRTLLD+V SMMSY
Subjt: FISSIDDYSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSY
Query: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
QL SSFWGYAVETAVHILNNVPSK+V TPFELWRGRKPSLSHFRIW CP H+LVTN KK+EP SRLCQFVG KETRGG+FFD QEN
Subjt: AQLASSFWGYAVETAVHILNNVPSKSVSVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFDLQEN
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.6e-40 | 34.81 | Show/hide |
Query: NNTYLWHLRLGHIN------LDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLE----LIHSDLCGPMNVKARGGFEYFISSIDD
NN LWH R GHI+ + R LLN LE S CE CL GK + PF K + K H++ ++HSD+CGP+ YF+ +D
Subjt: NNTYLWHLRLGHIN------LDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLE----LIHSDLCGPMNVKARGGFEYFISSIDD
Query: YSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSF
++ Y YL+++KS+ F+++ A+ E + ++ L D EY+ + + ++ GI + L+ TPQ NGVSER RT+ + R+M+S A+L SF
Subjt: YSRYGYLYLMEHKSEALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSF
Query: WGYAVETAVHILNNVPSKSV---SVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLK-KMEPHSRLCQFVG
WG AV TA +++N +PS+++ S TP+E+W +KP L H R++ ++ + N + K + S FVG
Subjt: WGYAVETAVHILNNVPSKSV---SVTPFELWRGRKPSLSHFRIWSCPAHMLVTNLK-KMEPHSRLCQFVG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.3e-49 | 36.7 | Show/hide |
Query: LWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKS
LWH R+GH++ + L K L++ + ++ PC+ CL GK + F R L+L++SD+CGPM +++ GG +YF++ IDD SR ++Y+++ K
Subjt: LWHLRLGHINLDRIGRLVKNELLNELEDDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKS
Query: EALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSFWGYAVETAVHILNN
+ + F+++ A VE +++K LRSD GEY F++Y HGI+ + + GTPQ NGV+ER NRT+++ VRSM+ A+L SFWG AV+TA +++N
Subjt: EALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSFWGYAVETAVHILNN
Query: VPSKSVSV-TPFELWRGRKPSLSHFRIWSCP--AHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFD
PS ++ P +W ++ S SH +++ C AH+ K++ S C F+G E G +D
Subjt: VPSKSVSV-TPFELWRGRKPSLSHFRIWSCP--AHMLVTNLKKMEPHSRLCQFVGCHKETRGGIFFD
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 2.2e-16 | 28.63 | Show/hide |
Query: NTQNKRQRISPNNNTY-LWHLRLGHINLDRIGRLVKNELLNELEDDSLP-------PCESCLEGKMTKRPFTGKGYRAK-----EHLELIHSDLCGPMNV
N NK + S N Y L H LGH N I + +K + L++ + C CL GK TK KG R K E + +H+D+ GP++
Subjt: NTQNKRQRISPNNNTY-LWHLRLGHINLDRIGRLVKNELLNELEDDSLP-------PCESCLEGKMTKRPFTGKGYRAK-----EHLELIHSDLCGPMNV
Query: KARGGFEYFISSIDDYSRYGYLYLMEHKSE--ALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTL
+ YFIS D+ +R+ ++Y + + E L F A ++ + R+ +++ DR EY + + GI + + +GV+ER NRTL
Subjt: KARGGFEYFISSIDDYSRYGYLYLMEHKSE--ALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTL
Query: LDIVRSMMSYAQLASSFWGYAVETAVHILNNVPS
L+ R+++ + L + W AVE + I N++ S
Subjt: LDIVRSMMSYAQLASSFWGYAVETAVHILNNVPS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.4e-30 | 29.41 | Show/hide |
Query: WHLRLGHINLDRIGRLVKNELLNELE-DDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKS
WH RLGH + ++ N L+ L C CL K K PF+ + LE I+SD+ + + + Y++ +D ++RY +LY ++ KS
Subjt: WHLRLGHINLDRIGRLVKNELLNELE-DDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKS
Query: EALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSFWGYAVETAVHILNN
+ E F +K +E RI SD GE++ L +Y +HGI S TP+ NG+SER++R +++ +++S+A + ++W YA AV+++N
Subjt: EALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSFWGYAVETAVHILNN
Query: VPSKSVSV-TPFELWRGRKPSLSHFRIWSCPAH--MLVTNLKKMEPHSRLCQFVG
+P+ + + +PF+ G P+ R++ C + + N K++ SR C F+G
Subjt: VPSKSVSV-TPFELWRGRKPSLSHFRIWSCPAH--MLVTNLKKMEPHSRLCQFVG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-32 | 30.59 | Show/hide |
Query: WHLRLGHINLDRIGRLVKNELLNELE-DDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKS
WH RLGH +L + ++ N L L L C C K K PF+ + + LE I+SD+ + + + Y++ +D ++RY +LY ++ KS
Subjt: WHLRLGHINLDRIGRLVKNELLNELE-DDSLPPCESCLEGKMTKRPFTGKGYRAKEHLELIHSDLCGPMNVKARGGFEYFISSIDDYSRYGYLYLMEHKS
Query: EALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSFWGYAVETAVHILNN
+ + F +K+ VE RI L SD GE++ LR DY+ +HGI S TP+ NG+SER++R ++++ +++S+A + ++W YA AV+++N
Subjt: EALEKFKEYKAEVEILLSKRIKILRSDRVGEYMDLRFQDYMIEHGIQFQLSAHGTPQQNGVSERRNRTLLDIVRSMMSYAQLASSFWGYAVETAVHILNN
Query: VPSKSVSV-TPFELWRGRKPSLSHFRIWSCPAH--MLVTNLKKMEPHSRLCQFVG
+P+ + + +PF+ G+ P+ +++ C + + N K+E S+ C F+G
Subjt: VPSKSVSV-TPFELWRGRKPSLSHFRIWSCPAH--MLVTNLKKMEPHSRLCQFVG
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