; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc02g0050721 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0050721
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRibonuclease H
Genome locationCMiso1.1chr02:17012391..17013479
RNA-Seq ExpressionCmc02g0050721
SyntenyCmc02g0050721
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033220.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]6.4e-16494.3Show/hide
Query:  MAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRME
        MAEYEACSMGVRMAYEMKVK+LRVLGDSLL VHQLNGEWETRDAKLIPYNDYIRTIAQTF SITFEHVP ESNQVADALAT SAMFNVAYSEEVQPIRME
Subjt:  MAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRME

Query:  KYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASENSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMAR
        KYKTPSYCMSLER+PDGK WYHDIKHYIAYREYP G SENSKRT+RRLAMKFFLSGEVLYKRNYDMTLLRCVDAL+AK  LEEIHEGVCGTHANGHMMAR
Subjt:  KYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASENSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMAR

Query:  QILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASPLHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKY
        QILRAGYFWLTMESDCIKYVRRCHKCQIYADK HAPASPLHVLTAPWPFSMWGLDVIGPIE KASNGHRFILVAIDYFTKWVEAASYKSVTKQAV+K+
Subjt:  QILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASPLHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKY

KAA0037720.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]1.5e-15287.21Show/hide
Query:  MALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPY
        +A+VNTSSNTWT+MFDGAT EIGHGVGAILMSPDGKWYPLTAKLYFD TNNMA+YEA S+GVR+AYEMK+K LRVLGDSLLVVHQLN EWETRDAKLIPY
Subjt:  MALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPY

Query:  NDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASENSKRTIRRLA
        NDYI T+ QTF S+TFEH PRE NQV DALAT S MFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGK WYHDIKHYIAYREYP GAS+NSKRTI+RLA
Subjt:  NDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASENSKRTIRRLA

Query:  MKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASPLHVLTAP
        MKFFLSG+VLYKRNYDMTLLRCVDALEA+  LEE HEGVCGTHANG+MMARQ+LR+GYFWLTME DCIK+ RRCHKCQIYADKVHAPAS LHVLTAP
Subjt:  MKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASPLHVLTAP

KAA0046609.1 hypothetical protein E6C27_scaffold114G001550 [Cucumis melo var. makuwa]1.9e-216100Show/hide
Query:  MKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEW
        MKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEW
Subjt:  MKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEW

Query:  ETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASE
        ETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASE
Subjt:  ETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASE

Query:  NSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASP
        NSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASP
Subjt:  NSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASP

Query:  LHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKYGLP
        LHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKYGLP
Subjt:  LHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKYGLP

KAA0049671.1 uncharacterized protein E6C27_scaffold76G00060 [Cucumis melo var. makuwa]2.7e-19490.53Show/hide
Query:  MKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEW
        MKFDFPDEDIMA++NTS NTWTMMFDGATNEIGHGVG ILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMK+KKLRVLGDS+LVVHQLNGEW
Subjt:  MKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEW

Query:  ETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASE
        ETRDAKLIPYNDYI TIAQTF SITFEHVPRESNQV DALAT SAMFNVAYSE VQPIRMEKYKTPSYCMSLEREP+GK WYHDIKHYIAYREYPPGASE
Subjt:  ETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASE

Query:  NSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASP
        NSKRTIRRLAM+FFL+GEVLYKRNY MTLLRCVDALE +  LEEIHEGV  TH N HMMA Q+LRAGYFWL MES+CIKYVRRC+KCQIYADK HAP  P
Subjt:  NSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASP

Query:  LHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKY
        LHVLTAPWPFSMWGLDVIGPIE KASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVK+
Subjt:  LHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKY

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]2.1e-15467.73Show/hide
Query:  MKFDFPDEDIMALVNTSSN----TWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQL
        +KFDFPDE I  +  +  +    TWTMMFDGA+NE+GHG+GAIL+SP G+ YPL A+L FDC +NMAEYEACSMGV+ A +MKVKKL+V GDS+LV+HQL
Subjt:  MKFDFPDEDIMALVNTSSN----TWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQL

Query:  NGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPP
         GEWETRD KL+PY  +I  ++Q F  I+F+++PRE+NQVADALAT + MFN+  +E+V+PI++ +   P+ CMS+E EPDGK W+HDIK YI  +EYPP
Subjt:  NGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPP

Query:  GASENSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHA
         ASEN KRT+R+LA+KFFL+GE+LYKRN+DM LLRCV+  +A   +EEIHEGVCGTHANGHMMARQILRAGY+WLT+E+DCIKY R+CHKCQIY+DK HA
Subjt:  GASENSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHA

Query:  PASPLHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVK---------YGLP
        PAS LH LTAPWPFSMWG+DVIGPIE KASNGH+FILVAIDYFTKWVEAASY+ VTK  VVK         YGLP
Subjt:  PASPLHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVK---------YGLP

TrEMBL top hitse value%identityAlignment
A0A5A7SQN1 Ribonuclease H3.1e-16494.3Show/hide
Query:  MAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRME
        MAEYEACSMGVRMAYEMKVK+LRVLGDSLL VHQLNGEWETRDAKLIPYNDYIRTIAQTF SITFEHVP ESNQVADALAT SAMFNVAYSEEVQPIRME
Subjt:  MAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRME

Query:  KYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASENSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMAR
        KYKTPSYCMSLER+PDGK WYHDIKHYIAYREYP G SENSKRT+RRLAMKFFLSGEVLYKRNYDMTLLRCVDAL+AK  LEEIHEGVCGTHANGHMMAR
Subjt:  KYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASENSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMAR

Query:  QILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASPLHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKY
        QILRAGYFWLTMESDCIKYVRRCHKCQIYADK HAPASPLHVLTAPWPFSMWGLDVIGPIE KASNGHRFILVAIDYFTKWVEAASYKSVTKQAV+K+
Subjt:  QILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASPLHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKY

A0A5A7T2W3 Putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H7.1e-15387.21Show/hide
Query:  MALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPY
        +A+VNTSSNTWT+MFDGAT EIGHGVGAILMSPDGKWYPLTAKLYFD TNNMA+YEA S+GVR+AYEMK+K LRVLGDSLLVVHQLN EWETRDAKLIPY
Subjt:  MALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPY

Query:  NDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASENSKRTIRRLA
        NDYI T+ QTF S+TFEH PRE NQV DALAT S MFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGK WYHDIKHYIAYREYP GAS+NSKRTI+RLA
Subjt:  NDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASENSKRTIRRLA

Query:  MKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASPLHVLTAP
        MKFFLSG+VLYKRNYDMTLLRCVDALEA+  LEE HEGVCGTHANG+MMARQ+LR+GYFWLTME DCIK+ RRCHKCQIYADKVHAPAS LHVLTAP
Subjt:  MKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASPLHVLTAP

A0A5A7TZF3 Ribonuclease H9.2e-217100Show/hide
Query:  MKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEW
        MKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEW
Subjt:  MKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEW

Query:  ETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASE
        ETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASE
Subjt:  ETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASE

Query:  NSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASP
        NSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASP
Subjt:  NSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASP

Query:  LHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKYGLP
        LHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKYGLP
Subjt:  LHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKYGLP

A0A5A7U7X5 Ribonuclease H1.3e-19490.53Show/hide
Query:  MKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEW
        MKFDFPDEDIMA++NTS NTWTMMFDGATNEIGHGVG ILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMK+KKLRVLGDS+LVVHQLNGEW
Subjt:  MKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEW

Query:  ETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASE
        ETRDAKLIPYNDYI TIAQTF SITFEHVPRESNQV DALAT SAMFNVAYSE VQPIRMEKYKTPSYCMSLEREP+GK WYHDIKHYIAYREYPPGASE
Subjt:  ETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASE

Query:  NSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASP
        NSKRTIRRLAM+FFL+GEVLYKRNY MTLLRCVDALE +  LEEIHEGV  TH N HMMA Q+LRAGYFWL MES+CIKYVRRC+KCQIYADK HAP  P
Subjt:  NSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASP

Query:  LHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKY
        LHVLTAPWPFSMWGLDVIGPIE KASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVK+
Subjt:  LHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKY

A0A6J1D099 Ribonuclease H1.0e-15467.73Show/hide
Query:  MKFDFPDEDIMALVNTSSN----TWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQL
        +KFDFPDE I  +  +  +    TWTMMFDGA+NE+GHG+GAIL+SP G+ YPL A+L FDC +NMAEYEACSMGV+ A +MKVKKL+V GDS+LV+HQL
Subjt:  MKFDFPDEDIMALVNTSSN----TWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQL

Query:  NGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPP
         GEWETRD KL+PY  +I  ++Q F  I+F+++PRE+NQVADALAT + MFN+  +E+V+PI++ +   P+ CMS+E EPDGK W+HDIK YI  +EYPP
Subjt:  NGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPP

Query:  GASENSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHA
         ASEN KRT+R+LA+KFFL+GE+LYKRN+DM LLRCV+  +A   +EEIHEGVCGTHANGHMMARQILRAGY+WLT+E+DCIKY R+CHKCQIY+DK HA
Subjt:  GASENSKRTIRRLAMKFFLSGEVLYKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHA

Query:  PASPLHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVK---------YGLP
        PAS LH LTAPWPFSMWG+DVIGPIE KASNGH+FILVAIDYFTKWVEAASY+ VTK  VVK         YGLP
Subjt:  PASPLHVLTAPWPFSMWGLDVIGPIERKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVK---------YGLP

SwissProt top hitse value%identityAlignment
P54164 Uncharacterized protein YpeP2.5e-0631.5Show/hide
Query:  TMMFDGATNEIGH--GVGAIL-MSPDGKWYPLTAKLYFDC-TNNMAEYEACSMGVRMAYEMKVKK--LRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIR
        T+ FDG+ ++     G+G ++  S  G  + L     F   TNN AEY A    +R   E+   +  + + GDSL+V++QL+G W   D     + D I 
Subjt:  TMMFDGATNEIGH--GVGAIL-MSPDGKWYPLTAKLYFDC-TNNMAEYEACSMGVRMAYEMKVKK--LRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIR

Query:  TIAQTF-YSITFEHVPRESNQVADALA
         + ++   + T+E + R+ NQ AD LA
Subjt:  TIAQTF-YSITFEHVPRESNQVADALA

P64956 Uncharacterized protein Mb2253c3.6e-0830.88Show/hide
Query:  GVGAILMSPDGKWYPLTAKLYFD-CTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRES
        G GA++ + D       +K      TNN+AEY     G+  A ++   +  VL DS LVV Q++G W+ +   L+      + +A  F  I +E VPR  
Subjt:  GVGAILMSPDGKWYPLTAKLYFD-CTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRES

Query:  NQVADALATFSAMFNVAYS--EEVQPIRMEKYKTPS
        N  AD LA   AM   A S   +  P ++   ++P+
Subjt:  NQVADALATFSAMFNVAYS--EEVQPIRMEKYKTPS

P9WLH4 Uncharacterized protein MT22873.6e-0830.88Show/hide
Query:  GVGAILMSPDGKWYPLTAKLYFD-CTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRES
        G GA++ + D       +K      TNN+AEY     G+  A ++   +  VL DS LVV Q++G W+ +   L+      + +A  F  I +E VPR  
Subjt:  GVGAILMSPDGKWYPLTAKLYFD-CTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRES

Query:  NQVADALATFSAMFNVAYS--EEVQPIRMEKYKTPS
        N  AD LA   AM   A S   +  P ++   ++P+
Subjt:  NQVADALATFSAMFNVAYS--EEVQPIRMEKYKTPS

P9WLH5 Bifunctional protein Rv2228c3.6e-0830.88Show/hide
Query:  GVGAILMSPDGKWYPLTAKLYFD-CTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRES
        G GA++ + D       +K      TNN+AEY     G+  A ++   +  VL DS LVV Q++G W+ +   L+      + +A  F  I +E VPR  
Subjt:  GVGAILMSPDGKWYPLTAKLYFD-CTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFYSITFEHVPRES

Query:  NQVADALATFSAMFNVAYS--EEVQPIRMEKYKTPS
        N  AD LA   AM   A S   +  P ++   ++P+
Subjt:  NQVADALATFSAMFNVAYS--EEVQPIRMEKYKTPS

Q9HSF6 Ribonuclease HI1.4e-0936.13Show/hide
Query:  FDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFY
        FDGA+  N     VG +L+S DG             TNN AEY+A    +  A +     + + GDS LV  QL G W+T D  L       R +   F 
Subjt:  FDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFY

Query:  SITFEHVPRESNQVADALA
          +  HVPR +N+ ADALA
Subjt:  SITFEHVPRESNQVADALA

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein3.9e-1031.54Show/hide
Query:  SSNTWTMMFDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYI
        S  T  + FDGA+  N    G  A+L + DG       +     TNN AEY A  +G++ A E   K ++V GDS LV  Q+ G+W+     L   +   
Subjt:  SSNTWTMMFDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYI

Query:  RTIAQTFYSITFEHVPRESNQVADALATFS
        + +     S    HV R  N  AD  A  +
Subjt:  RTIAQTFYSITFEHVPRESNQVADALATFS

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.5e-1434.09Show/hide
Query:  SNTWTMMFDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIR
        +++ T+ FDGA+  N    G GA+L + D        +   + TNN+AEY A  +G+R A +   K + VLGDS+LV  Q+ G W+T   K+       +
Subjt:  SNTWTMMFDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIR

Query:  TIAQTFYSITFEHVPRESNQVADALATFSAMF
         +  +F +   +H+ RE N  AD  A  SA+F
Subjt:  TIAQTFYSITFEHVPRESNQVADALATFSAMF

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.5e-1434.09Show/hide
Query:  SNTWTMMFDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIR
        +++ T+ FDGA+  N    G GA+L + D        +   + TNN+AEY A  +G+R A +   K + VLGDS+LV  Q+ G W+T   K+       +
Subjt:  SNTWTMMFDGAT--NEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIR

Query:  TIAQTFYSITFEHVPRESNQVADALATFSAMF
         +  +F +   +H+ RE N  AD  A  SA+F
Subjt:  TIAQTFYSITFEHVPRESNQVADALATFSAMF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTGATTTTCCAGATGAAGATATCATGGCATTAGTAAATACATCATCGAATACATGGACAATGATGTTTGATGGAGCCACGAACGAAATAGGGCACGGTGTGGG
AGCAATTTTGATGTCCCCCGATGGGAAGTGGTACCCTTTAACTGCTAAGTTATATTTCGATTGCACCAATAACATGGCTGAGTATGAGGCATGTAGTATGGGAGTGCGAA
TGGCATACGAGATGAAAGTAAAAAAATTACGAGTCCTTGGGGACTCCCTGTTGGTTGTACATCAGCTGAATGGGGAATGGGAGACAAGGGATGCTAAATTGATCCCTTAT
AACGATTATATTCGCACAATAGCGCAAACTTTTTATTCAATAACTTTTGAACACGTCCCACGCGAAAGCAATCAGGTTGCAGATGCATTAGCCACTTTTTCTGCCATGTT
TAATGTAGCTTACAGTGAAGAAGTTCAACCCATAAGGATGGAGAAGTATAAGACACCATCCTATTGTATGAGCCTCGAGCGGGAACCTGACGGTAAATCTTGGTATCATG
ATATTAAGCACTACATCGCATATCGGGAGTATCCACCAGGGGCATCGGAAAATAGTAAGCGCACCATTAGGAGGTTAGCCATGAAGTTCTTTCTAAGTGGTGAAGTATTA
TACAAAAGAAATTATGATATGACTCTACTGCGATGCGTTGATGCTTTGGAAGCCAAAATTTTTTTGGAAGAAATTCATGAAGGAGTGTGTGGGACGCATGCGAATGGACA
CATGATGGCGAGGCAAATTTTACGTGCTGGTTATTTTTGGTTGACCATGGAGTCAGACTGCATCAAATATGTGAGAAGATGCCATAAATGTCAAATATACGCAGATAAAG
TGCATGCTCCAGCCTCTCCATTGCATGTGTTGACGGCTCCATGGCCTTTCTCCATGTGGGGCTTGGATGTAATTGGACCCATTGAGCGAAAGGCATCAAATGGCCATCGA
TTCATTTTGGTAGCCATAGATTATTTCACGAAATGGGTAGAGGCTGCTTCCTACAAAAGTGTCACCAAGCAGGCCGTTGTCAAGTATGGTTTACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTGATTTTCCAGATGAAGATATCATGGCATTAGTAAATACATCATCGAATACATGGACAATGATGTTTGATGGAGCCACGAACGAAATAGGGCACGGTGTGGG
AGCAATTTTGATGTCCCCCGATGGGAAGTGGTACCCTTTAACTGCTAAGTTATATTTCGATTGCACCAATAACATGGCTGAGTATGAGGCATGTAGTATGGGAGTGCGAA
TGGCATACGAGATGAAAGTAAAAAAATTACGAGTCCTTGGGGACTCCCTGTTGGTTGTACATCAGCTGAATGGGGAATGGGAGACAAGGGATGCTAAATTGATCCCTTAT
AACGATTATATTCGCACAATAGCGCAAACTTTTTATTCAATAACTTTTGAACACGTCCCACGCGAAAGCAATCAGGTTGCAGATGCATTAGCCACTTTTTCTGCCATGTT
TAATGTAGCTTACAGTGAAGAAGTTCAACCCATAAGGATGGAGAAGTATAAGACACCATCCTATTGTATGAGCCTCGAGCGGGAACCTGACGGTAAATCTTGGTATCATG
ATATTAAGCACTACATCGCATATCGGGAGTATCCACCAGGGGCATCGGAAAATAGTAAGCGCACCATTAGGAGGTTAGCCATGAAGTTCTTTCTAAGTGGTGAAGTATTA
TACAAAAGAAATTATGATATGACTCTACTGCGATGCGTTGATGCTTTGGAAGCCAAAATTTTTTTGGAAGAAATTCATGAAGGAGTGTGTGGGACGCATGCGAATGGACA
CATGATGGCGAGGCAAATTTTACGTGCTGGTTATTTTTGGTTGACCATGGAGTCAGACTGCATCAAATATGTGAGAAGATGCCATAAATGTCAAATATACGCAGATAAAG
TGCATGCTCCAGCCTCTCCATTGCATGTGTTGACGGCTCCATGGCCTTTCTCCATGTGGGGCTTGGATGTAATTGGACCCATTGAGCGAAAGGCATCAAATGGCCATCGA
TTCATTTTGGTAGCCATAGATTATTTCACGAAATGGGTAGAGGCTGCTTCCTACAAAAGTGTCACCAAGCAGGCCGTTGTCAAGTATGGTTTACCTTAG
Protein sequenceShow/hide protein sequence
MKFDFPDEDIMALVNTSSNTWTMMFDGATNEIGHGVGAILMSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKKLRVLGDSLLVVHQLNGEWETRDAKLIPY
NDYIRTIAQTFYSITFEHVPRESNQVADALATFSAMFNVAYSEEVQPIRMEKYKTPSYCMSLEREPDGKSWYHDIKHYIAYREYPPGASENSKRTIRRLAMKFFLSGEVL
YKRNYDMTLLRCVDALEAKIFLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKCQIYADKVHAPASPLHVLTAPWPFSMWGLDVIGPIERKASNGHR
FILVAIDYFTKWVEAASYKSVTKQAVVKYGLP