; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc02g0051061 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0051061
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr02:17484013..17485797
RNA-Seq ExpressionCmc02g0051061
SyntenyCmc02g0051061
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037369.1 pol protein [Cucumis melo var. makuwa]0.0e+0095.12Show/hide
Query:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS
        MKASKLLSQGTWGILASVVDIREP+VSLSS+PVVREYPDVFPDEL GLPPPREVDFAIELE GTAPISRAPYRMAPA+LKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLT APAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL
        DLMNR+FKDF DSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIR+FL
Subjt:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL

Query:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIA+ LTQLT+K  PFVWSPACESSFQELKQKLVTAPVLTVPDG G+FVIYSDASKKGL CVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLL+DFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY
        AVSVGEVT+QLAQLSVQPTLRQKII AQLNDPYLVEKRRMVETGQGEDFSISSDDGL FEGRLCV EDSA+KTELLTEAHSSPFTMHPGSTKMY
Subjt:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY

KAA0040547.1 pol protein [Cucumis melo var. makuwa]0.0e+0095.12Show/hide
Query:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS
        MKASKLLSQGTWGILASVVDIREP+VSLSS+PVVREYPDVF DEL GLPPPREVDFAIELE GTAPISRAPYRMAPA+LKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL
        DLMNRVFKDF DSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN LYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEI++FL
Subjt:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL

Query:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIAS LTQLT+K TPFVWSPACESSFQELKQKLVTAPVLTVPDG G+FVIYSDASKKGL CVLMQQGKVVAYASRQLK +EQNYPT
Subjt:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLEL AVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA LITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY
        AVSVGEVTSQLAQLSVQPTLRQKII AQLNDPYLVEKRRMVETGQGEDFSISSDDGL FEGRLCV EDSAV+TELLTEAHSSPFTMHPGSTKMY
Subjt:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY

KAA0045309.1 pol protein [Cucumis melo var. makuwa]0.0e+0094.95Show/hide
Query:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS
        MKASKLLSQGTWGILASVVDIREP+VSLSS+PVVREYPDVFPDEL GLPPP+EVDFAIELE GTAPISRAPY+MAPA+LKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+V+SFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL
        DLMNRVFKDF DSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIR+FL
Subjt:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL

Query:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVED SRIAS LTQLT+K TPFVWSPACE SFQELKQKLVTAPVLTVPDG G+FVIYSDASKKGL CVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD+LSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY
        AVSVGEVT+QLAQLSVQPTLRQKII AQLNDPYL EKRRMVETGQGEDFSISSDDGL FEGRLCV EDSAVKTELLTEAHSSPFTMHPGSTKMY
Subjt:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY

KAA0060745.1 pol protein [Cucumis melo var. makuwa]0.0e+0095.29Show/hide
Query:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS
        MKASKLLSQGTWGILASVVDIREP+VSLSS+PVVREYPDVFPDEL GLPPPREVDFAIELE GTAPISRAPYRMAPA+LKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL
        DLMNRVFKDF DSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIR+FL
Subjt:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL

Query:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIAS LTQLT+K TPFVWSPACESSFQELKQKLV APVLTVPDG G+FVIYSDASKKGL CVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY
        AVSVGEVT+QLAQLSVQPTLRQKII AQLNDPYL EKRRMVETGQGEDFSIS DDGL FEGRLCV EDSAVKTELLTEAHSS FTMHPGSTKMY
Subjt:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY

KAA0063098.1 pol protein [Cucumis melo var. makuwa]0.0e+0095.12Show/hide
Query:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS
        MK SKLLSQGTWGILASVVDIREP+VSLSSKPVVREYPDVFPDEL GLPPPREVDFAIELE GTAPISRAPYRMA A+LKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL
        DLMNRVFKDF DSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIR+FL
Subjt:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL

Query:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIAS LTQLT+K TPFVWSPACE SFQELKQKLVTAPVLTVPDG G+FVIYSDASKK L CVLMQQGKVVAYASRQLK+HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY
         VSVGEVT+QLAQLSVQPTLRQKII AQLNDPYL EKRRMVETGQGEDFSISSDDGL FEGRLCV EDSAVKTELLTEAHSSPFTMHPGSTKMY
Subjt:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY

TrEMBL top hitse value%identityAlignment
A0A5A7T7M0 Reverse transcriptase0.0e+0095.12Show/hide
Query:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS
        MKASKLLSQGTWGILASVVDIREP+VSLSS+PVVREYPDVFPDEL GLPPPREVDFAIELE GTAPISRAPYRMAPA+LKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLT APAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL
        DLMNR+FKDF DSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIR+FL
Subjt:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL

Query:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIA+ LTQLT+K  PFVWSPACESSFQELKQKLVTAPVLTVPDG G+FVIYSDASKKGL CVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLL+DFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY
        AVSVGEVT+QLAQLSVQPTLRQKII AQLNDPYLVEKRRMVETGQGEDFSISSDDGL FEGRLCV EDSA+KTELLTEAHSSPFTMHPGSTKMY
Subjt:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY

A0A5A7TG62 Reverse transcriptase0.0e+0095.12Show/hide
Query:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS
        MKASKLLSQGTWGILASVVDIREP+VSLSS+PVVREYPDVF DEL GLPPPREVDFAIELE GTAPISRAPYRMAPA+LKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL
        DLMNRVFKDF DSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN LYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEI++FL
Subjt:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL

Query:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIAS LTQLT+K TPFVWSPACESSFQELKQKLVTAPVLTVPDG G+FVIYSDASKKGL CVLMQQGKVVAYASRQLK +EQNYPT
Subjt:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLEL AVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA LITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY
        AVSVGEVTSQLAQLSVQPTLRQKII AQLNDPYLVEKRRMVETGQGEDFSISSDDGL FEGRLCV EDSAV+TELLTEAHSSPFTMHPGSTKMY
Subjt:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY

A0A5A7TVN9 Reverse transcriptase0.0e+0094.95Show/hide
Query:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS
        MKASKLLSQGTWGILASVVDIREP+VSLSS+PVVREYPDVFPDEL GLPPP+EVDFAIELE GTAPISRAPY+MAPA+LKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+V+SFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL
        DLMNRVFKDF DSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIR+FL
Subjt:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL

Query:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVED SRIAS LTQLT+K TPFVWSPACE SFQELKQKLVTAPVLTVPDG G+FVIYSDASKKGL CVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD+LSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY
        AVSVGEVT+QLAQLSVQPTLRQKII AQLNDPYL EKRRMVETGQGEDFSISSDDGL FEGRLCV EDSAVKTELLTEAHSSPFTMHPGSTKMY
Subjt:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY

A0A5A7V4E4 Reverse transcriptase0.0e+0095.29Show/hide
Query:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS
        MKASKLLSQGTWGILASVVDIREP+VSLSS+PVVREYPDVFPDEL GLPPPREVDFAIELE GTAPISRAPYRMAPA+LKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL
        DLMNRVFKDF DSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIR+FL
Subjt:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL

Query:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIAS LTQLT+K TPFVWSPACESSFQELKQKLV APVLTVPDG G+FVIYSDASKKGL CVLMQQGKVVAYASRQLK HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY
        AVSVGEVT+QLAQLSVQPTLRQKII AQLNDPYL EKRRMVETGQGEDFSIS DDGL FEGRLCV EDSAVKTELLTEAHSS FTMHPGSTKMY
Subjt:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY

A0A5A7V646 Reverse transcriptase0.0e+0095.12Show/hide
Query:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS
        MK SKLLSQGTWGILASVVDIREP+VSLSSKPVVREYPDVFPDEL GLPPPREVDFAIELE GTAPISRAPYRMA A+LKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSRYGHYEF+VMSFGLTNAPAVFM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFM

Query:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL
        DLMNRVFKDF DSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIR+FL
Subjt:  DLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFL

Query:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVEDFSRIAS LTQLT+K TPFVWSPACE SFQELKQKLVTAPVLTVPDG G+FVIYSDASKK L CVLMQQGKVVAYASRQLK+HEQNYPT
Subjt:  GLAGYYRRFVEDFSRIASLLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
        HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI
Subjt:  HDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEI

Query:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY
         VSVGEVT+QLAQLSVQPTLRQKII AQLNDPYL EKRRMVETGQGEDFSISSDDGL FEGRLCV EDSAVKTELLTEAHSSPFTMHPGSTKMY
Subjt:  AVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.63.1e-8639.66Show/hide
Query:  YRMAPAKLKELKVQLQELLDKCFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI
        Y    A  +E++ Q+Q++L++  IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +
Subjt:  YRMAPAKLKELKVQLQELLDKCFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRI

Query:  RDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLG
            + KTAF +++GHYE++ M FGL NAPA F   MN + +   +   +V++DDI+++S +  EH + L  V E L    L  +  KCEF  ++ TFLG
Subjt:  RDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLG

Query:  HVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIASLLTQLTKKETPF-VWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIY
        HV++ +G+  +P KIE +  +P P+   EI+ FLGL GYYR+F+ +F+ IA  +T+  KK       +P  +S+F++LK  +   P+L VPD    F + 
Subjt:  HVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIASLLTQLTKKETPF-VWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIY

Query:  SDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG
        +DAS   L  VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L + +  K+ N +  RW   + ++D +I Y  G
Subjt:  SDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG

Query:  KANVVADALSR
        K N VADALSR
Subjt:  KANVVADALSR

P0CT34 Transposon Tf2-1 polyprotein3.0e-8130.69Show/hide
Query:  IREPKVSLSSKPVVREYPDVFPD-ELLGLPPP-REVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVSPWGAPVLFVKKKDGSMRL
        ++EP++      + +E+ D+  +     LP P + ++F +EL      +    Y + P K++ +  ++ + L    IR S +    PV+FV KK+G++R+
Subjt:  IREPKVSLSSKPVVREYPDVFPD-ELLGLPPP-REVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVSPWGAPVLFVKKKDGSMRL

Query:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFQDSFVIVF
         +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR   G +E++VM +G++ APA F   +N +  + ++S V+ +
Subjt:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFQDSFVIVF

Query:  IDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIAS
        +DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Subjt:  IDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIAS

Query:  LLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALK
         L  L KK+  + W+P    + + +KQ LV+ PVL   D     ++ +DAS   +  VL Q+        V Y S ++   + NY   D E+ A++ +LK
Subjt:  LLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALK

Query:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTS
         WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I        +
Subjt:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTS

Query:  QLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPG
         + Q+S+    + +++    ND  L+      +    E+  +     +  + ++ +  D+ +   ++ + H     +HPG
Subjt:  QLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPG

P0CT41 Transposon Tf2-12 polyprotein3.0e-8130.69Show/hide
Query:  IREPKVSLSSKPVVREYPDVFPD-ELLGLPPP-REVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVSPWGAPVLFVKKKDGSMRL
        ++EP++      + +E+ D+  +     LP P + ++F +EL      +    Y + P K++ +  ++ + L    IR S +    PV+FV KK+G++R+
Subjt:  IREPKVSLSSKPVVREYPDVFPD-ELLGLPPP-REVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVSPWGAPVLFVKKKDGSMRL

Query:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFQDSFVIVF
         +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR   G +E++VM +G++ APA F   +N +  + ++S V+ +
Subjt:  CIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFQDSFVIVF

Query:  IDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIAS
        +DDILI+SK+E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Subjt:  IDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIAS

Query:  LLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALK
         L  L KK+  + W+P    + + +KQ LV+ PVL   D     ++ +DAS   +  VL Q+        V Y S ++   + NY   D E+ A++ +LK
Subjt:  LLTQLTKKETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALK

Query:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTS
         WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  P+ +D E   I        +
Subjt:  IWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTS

Query:  QLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPG
         + Q+S+    + +++    ND  L+      +    E+  +     +  + ++ +  D+ +   ++ + H     +HPG
Subjt:  QLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFSISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPG

P20825 Retrovirus-related Pol polyprotein from transposon 2971.2e-8238.04Show/hide
Query:  APISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
        +PI    Y +A     E++ Q+QE+L++  IR S SP+ +P   V KK         R+ IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  
Subjt:  APISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS

Query:  GYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
        G+HQ+ + +  I KTAF ++ GHYE++ M FGL NAPA F   MN + +   +   +V++DDI+I+S +  EH   +  V   L    L  +  KCEF  
Subjt:  GYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFQDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWL

Query:  KKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIASLLTQLTKKETPF-VWSPACESSFQELKQKLVTAPVLTVPDG
        K+  FLGH+V+ +G+  +P K++ + ++P P+   EIR FLGL GYYR+F+ +++ IA  +T   KK T           +F++LK  ++  P+L +PD 
Subjt:  KKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIASLLTQLTKKETPF-VWSPACESSFQELKQKLVTAPVLTVPDG

Query:  LGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDC
           FV+ +DAS   L  VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L++    KE   +  RW   + +Y  
Subjt:  LGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDC

Query:  EILYHPGKANVVADALSR
        +I Y  GK N VADALSR
Subjt:  EILYHPGKANVVADALSR

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus6.1e-8235.05Show/hide
Query:  EYPDVFPDELLGLPPPREVDFAIELESGT---APISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNK
        E+P +F   L G+     V+ A++ E  T    PI    Y        E++ Q+ ELL    IRPS SP+ +P+  V KK     +   R+ +D++ LN 
Subjt:  EYPDVFPDELLGLPPPREVDFAIELESGT---APISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNK

Query:  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFQDSFVIVFIDDILIYSK
        VT+ + YP+P I+     L  A  F+ +DL SG+HQ+ +++SDIPKTAF +  G YEF+ + FGL NAPA+F  +++ + ++       V+IDDI+++S+
Subjt:  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFQDSFVIVFIDDILIYSK

Query:  TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIASLLTQLTK--
            H ++L  VL +L    L     K  F   +V FLG++V+++G+  DP K+  ++  P P++V E++ FLG+  YYR+F++D++++A  LT LT+  
Subjt:  TEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIASLLTQLTK--

Query:  ---------KETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAVVFAL
                  + P         SF +LK  L ++ +L  P     F + +DAS   +  VL Q    + + +AY SR L   E+NY T + E+ A++++L
Subjt:  ---------KETPFVWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAVVFAL

Query:  KIWRHYLYGE-KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR
           R YLYG   I++YTDH+ L +    +  N + +RW   +++Y+CE++Y PGK+NVVADALSR
Subjt:  KIWRHYLYGE-KIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein4.1e-2543.2Show/hide
Query:  HLHQVLETLRANKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIASLLTQLTKKETPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+E +  WP P   +E+R FLGL GYYRRFV+++ +I   LT+L KK +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIASLLTQLTKKETPFVW

Query:  SPACESSFQELKQKLVTAPVLTVPD
        +     +F+ LK  + T PVL +PD
Subjt:  SPACESSFQELKQKLVTAPVLTVPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCTAGTAAATTACTTAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATATTAGAGAGCCAAAAGTTTCCCTATCTTCCAAACCAGTGGTAAGGGAGTA
CCCTGATGTTTTTCCCGACGAGCTCTTAGGACTTCCACCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAATCGGGCACTGCTCCTATCTCGAGGGCCCCTTACAGAA
TGGCTCCAGCCAAGCTAAAAGAGCTGAAGGTCCAGTTGCAGGAGTTGCTGGACAAGTGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAG
AAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCA
GGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGATAGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACG
AGTTCATTGTGATGTCTTTTGGCTTGACTAACGCCCCTGCAGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTCCAAGACTCATTCGTCATAGTCTTCATTGAT
GACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAGGTTTTGGAGACTCTTCGAGCCAACAAGCTGTATGCCAAGTTCTCCAAGTGTGAGTT
CTGGTTAAAGAAGGTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGTGGTGACCAACTGGCCTCGACCGTCTACAGTCA
GTGAGATTCGAAATTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCTGTTGACCCAGTTGACCAAGAAGGAAACCCCTTTT
GTCTGGAGCCCAGCATGCGAGAGTAGCTTCCAGGAGCTTAAGCAGAAGCTGGTGACTGCACCAGTCCTGACAGTGCCTGATGGGTTGGGAAGCTTTGTGATCTATAGTGA
TGCCTCCAAGAAGGGACTGGACTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGACTTAG
AGTTGGCAGCTGTGGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATATACACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAGAAG
GAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAA
GGTTGCACATTCAGCAGCGCTGATCACCAAGCAAACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAAT
TGTCGGTTCAGCCAACCTTGAGGCAAAAGATCATCGTTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTATGGTAGAGACAGGGCAAGGTGAGGACTTCTCC
ATATCCTCTGACGATGGCCTTACGTTTGAGGGACGCCTGTGTGTGTCGGAAGACAGCGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCA
CCCTGGAAGCACGAAGATGTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCTAGTAAATTACTTAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATATTAGAGAGCCAAAAGTTTCCCTATCTTCCAAACCAGTGGTAAGGGAGTA
CCCTGATGTTTTTCCCGACGAGCTCTTAGGACTTCCACCTCCCAGAGAGGTAGACTTCGCCATCGAGTTAGAATCGGGCACTGCTCCTATCTCGAGGGCCCCTTACAGAA
TGGCTCCAGCCAAGCTAAAAGAGCTGAAGGTCCAGTTGCAGGAGTTGCTGGACAAGTGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAG
AAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCA
GGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGATAGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACG
AGTTCATTGTGATGTCTTTTGGCTTGACTAACGCCCCTGCAGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTCCAAGACTCATTCGTCATAGTCTTCATTGAT
GACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTACACCAGGTTTTGGAGACTCTTCGAGCCAACAAGCTGTATGCCAAGTTCTCCAAGTGTGAGTT
CTGGTTAAAGAAGGTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGTGGTGACCAACTGGCCTCGACCGTCTACAGTCA
GTGAGATTCGAAATTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCTGTTGACCCAGTTGACCAAGAAGGAAACCCCTTTT
GTCTGGAGCCCAGCATGCGAGAGTAGCTTCCAGGAGCTTAAGCAGAAGCTGGTGACTGCACCAGTCCTGACAGTGCCTGATGGGTTGGGAAGCTTTGTGATCTATAGTGA
TGCCTCCAAGAAGGGACTGGACTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGACTTAG
AGTTGGCAGCTGTGGTCTTTGCACTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATATACACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAGAAG
GAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAA
GGTTGCACATTCAGCAGCGCTGATCACCAAGCAAACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAAT
TGTCGGTTCAGCCAACCTTGAGGCAAAAGATCATCGTTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTATGGTAGAGACAGGGCAAGGTGAGGACTTCTCC
ATATCCTCTGACGATGGCCTTACGTTTGAGGGACGCCTGTGTGTGTCGGAAGACAGCGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCA
CCCTGGAAGCACGAAGATGTACTAG
Protein sequenceShow/hide protein sequence
MKASKLLSQGTWGILASVVDIREPKVSLSSKPVVREYPDVFPDELLGLPPPREVDFAIELESGTAPISRAPYRMAPAKLKELKVQLQELLDKCFIRPSVSPWGAPVLFVK
KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFQDSFVIVFID
DILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRNFLGLAGYYRRFVEDFSRIASLLTQLTKKETPF
VWSPACESSFQELKQKLVTAPVLTVPDGLGSFVIYSDASKKGLDCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQK
ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGQGEDFS
ISSDDGLTFEGRLCVSEDSAVKTELLTEAHSSPFTMHPGSTKMY