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Cmc02g0051321 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0051321
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDynein light chain
Genome locationCMiso1.1chr02:17775155..17775959
RNA-Seq ExpressionCmc02g0051321
SyntenyCmc02g0051321
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005868 - cytoplasmic dynein complex (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150050.1 dynein light chain 1, cytoplasmic [Cucumis sativus]5.1e-4196.74Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
        MLEGKATVKETDMSEKMQMHAMASAS ALDLFDVSD LSLAS+IKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS

XP_008462685.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]1.9e-43100Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
        MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS

XP_022144999.1 dynein light chain 1, cytoplasmic-like [Momordica charantia]3.5e-3484.62Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSP
        MLEGK  VKETDMSEKMQ+HAMASASHALDLFDVSD LSLA++IKK+FD TYG GWQCVVGSNFG FFTHS  TFIYF+LETLNFLIFK P
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSP

XP_022933771.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]2.9e-3686.96Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
        MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA++IKK+FD +YGSGWQCVVGSNFGCFFTHS GTFIYFSLETLNFLIFK+ S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS

XP_038878771.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]3.1e-3891.3Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
        MLEGKATVKETDMSEKMQ HAMASASHALDLFDVSD LSLA++IKKDFD  YGSGWQCVVGSNFGCFFTHS G+FIYFSLETLNFLIFKSPS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS

TrEMBL top hitse value%identityAlignment
A0A1S3CJ38 Dynein light chain9.0e-44100Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
        MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS

A0A1S3UQ79 Dynein light chain6.5e-3479.35Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
        MLEGKA VKETDMS KMQ+HAMA+ASHALDL+DVSD +S+A++IKK+FD  YG+GWQCVVGSNFGC+FTHS GTFIYF+LETLNFLIFK  S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS

A0A6J1CTX2 Dynein light chain1.7e-3484.62Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSP
        MLEGK  VKETDMSEKMQ+HAMASASHALDLFDVSD LSLA++IKK+FD TYG GWQCVVGSNFG FFTHS  TFIYF+LETLNFLIFK P
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSP

A0A6J1EZZ1 Dynein light chain1.4e-3686.96Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
        MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA++IKK+FD +YGSGWQCVVGSNFGCFFTHS GTFIYFSLETLNFLIFK+ S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS

A0A6J1I806 Dynein light chain1.4e-3686.96Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
        MLEGKATVK+TDMSEKMQ+HA ASASHALDLFDVSD LSLA++IKK+FD +YGSGWQCVVGSNFGCFFTHS GTFIYFSLETLNFLIFK+ S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm2.1e-1345.56Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS
        M E KA +K  DM E MQ  A+  A+ AL+ F++     +A+YIKK+FD  Y   W C+VG NFG + TH    FIYF L  +  L+FKS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS

Q22799 Dynein light chain 1, cytoplasmic2.1e-1343.33Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS
        M++ KA +K  DMS+ MQ  A+  A+ AL+ +++     +A+YIKK+FD  Y   W C+VG NFG + TH    FIYF L  +  L+FKS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS

Q24117 Dynein light chain 1, cytoplasmic1.2e-1344.44Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS
        M + KA +K  DMSE+MQ  A+  A+ AL+ +++     +A+YIKK+FD  Y   W C+VG NFG + TH    FIYF L  +  L+FKS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS

Q94748 Probable dynein light chain1.2e-1345.56Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS
        M E KA +K  DM E MQ  A+ +A+ ALD +++     +A+YIKK+FD  Y   W C+VG +FG + TH    FIYF L+   FL+FKS
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS

Q9UR05 Dynein light chain 1, cytoplasmic1.6e-1345.88Show/hide
Query:  ATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS
        A +K  DMSEKMQ  A+ +A  A++ F +     +A++IK++FD  +   W C+VG NFG F TH    FIYF L T+ FL+FKS
Subjt:  ATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS

Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 114.6e-1669.49Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCV
        MLEGKA V+++DM  KMQM AMA AS ALDLFDV D  S+A +IKK+FD  YGSGWQCV
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCV

AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.2e-3275Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS
        MLEGKA V+++DM  KMQM AMA AS ALDLFDV D  S+A +IKK+FD  YGSGWQCVVGSNFGCFFTHS GTFIYF LETL FLIFK  S
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS

AT3G16120.1 Dynein light chain type 1 family protein4.6e-3275.28Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFK
        MLEGKA V+ETDM  KMQM AM  AS +LDLFDV D +S+A++IKK+FD  YGSGWQCVVG+NFGCFFTHS GTFIYF L TLNFLIFK
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFK

AT4G27360.1 Dynein light chain type 1 family protein9.6e-2253.93Show/hide
Query:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFK
        MLEGKA + +TDM + M+  A++ AS ALD FDV++   +A +IKK+FD +YGSGWQC+VG++FG F TH  G FI+FS+ +L  L+FK
Subjt:  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFK

AT5G20110.1 Dynein light chain type 1 family protein3.6e-1346.84Show/hide
Query:  DMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS
        DM   MQ HA   A   LD  +      +A  +KK+FD  YG  W C+VGS+FG F THS G FIYFS++ L  L+FK+
Subjt:  DMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGGAAGGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCACGCCCTCGATCTCTTCGACGTCTCCGATTT
CCTCTCCCTTGCTTCCTATATCAAGAAGGATTTTGATGGTACTTATGGAAGTGGTTGGCAATGCGTGGTGGGTTCTAATTTCGGCTGCTTCTTCACTCATTCTATGGGCA
CTTTCATTTATTTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAATCCCCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
GAGAAAGACAAGAGAGTTTTTGTTTGCTTTGCTTTACCCTTTTCGCCTATATAATTATAATATATAATTCCATCTCTGTTTCCATTCCGATTTGGCAGCCACCACAGATT
TTCCATTCCCTGTTTTAGTTTCTCCACTTATATAATTAATAATAATAATAATAATAATCATCATCATCATCATCATCTTGAATCCGATCGAGAAGAAAGATGTTGGAAGG
GAAGGCCACCGTGAAAGAAACCGACATGTCGGAAAAAATGCAGATGCACGCCATGGCCTCTGCTTCTCACGCCCTCGATCTCTTCGACGTCTCCGATTTCCTCTCCCTTG
CTTCCTATATCAAGAAGGATTTTGATGGTACTTATGGAAGTGGTTGGCAATGCGTGGTGGGTTCTAATTTCGGCTGCTTCTTCACTCATTCTATGGGCACTTTCATTTAT
TTTTCCCTTGAAACTCTCAATTTTCTCATCTTTAAATCCCCTTCCTAATTCATATCTTTAGGGCTGCTCTCCTCTCTTTCGCCCCCCCTCTCTATCCCTAAAATTTACAT
GGAACGACGAGCAACAACAAACCCACCGTACGTTGCGTATGTATTATTATTGTCACATGTGATCCGTCTTTTAATTTCTCCTTCTGCTATGTATGTTTTTTAATAATTCA
TTTTTCTCTTTTACTTTCTTCATTTTTCATCATATGAACACATCTATATTATCTTTTATTCTTATTATTATTGCA
Protein sequenceShow/hide protein sequence
MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVVGSNFGCFFTHSMGTFIYFSLETLNFLIFKSPS