; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc02g0051551 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0051551
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRibonuclease H
Genome locationCMiso1.1chr02:18189966..18190661
RNA-Seq ExpressionCmc02g0051551
SyntenyCmc02g0051551
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062537.1 uncharacterized protein E6C27_scaffold79G00080 [Cucumis melo var. makuwa]1.5e-129100Show/hide
Query:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
        MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
Subjt:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD

Query:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
        RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
Subjt:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD

Query:  SIKKYLLKLKNLVHIFAITAGRLLNSCSATK
        SIKKYLLKLKNLVHIFAITAGRLLNSCSATK
Subjt:  SIKKYLLKLKNLVHIFAITAGRLLNSCSATK

TYK28756.1 uncharacterized protein E5676_scaffold403G001090 [Cucumis melo var. makuwa]1.5e-129100Show/hide
Query:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
        MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
Subjt:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD

Query:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
        RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
Subjt:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD

Query:  SIKKYLLKLKNLVHIFAITAGRLLNSCSATK
        SIKKYLLKLKNLVHIFAITAGRLLNSCSATK
Subjt:  SIKKYLLKLKNLVHIFAITAGRLLNSCSATK

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]5.6e-11397.1Show/hide
Query:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
        MVDATTGHEALSFMDGSSGYNQIR+ALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLH+YVECYVDDLVVK+KRRQDHLKDLKVVFD
Subjt:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD

Query:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
        RLRKYQLRMNPLKCAFG+TSGKFLGFIVRHRGIEIDQSKIDAIQKM RPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENF+WDEACQNAFD
Subjt:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD

Query:  SIKKYLL
        SIKKYLL
Subjt:  SIKKYLL

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]5.6e-11397.1Show/hide
Query:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
        MVDATTGHEALSFMDGSSGYNQIR+ALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLH+YVECYVDDLVVK+KRRQDHLKDLKVVFD
Subjt:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD

Query:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
        RLRKYQLRMNPLKCAFG+TSGKFLGFIVRHRGIEIDQSKIDAIQKM RPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENF+WDEACQNAFD
Subjt:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD

Query:  SIKKYLL
        SIKKYLL
Subjt:  SIKKYLL

XP_031742390.1 uncharacterized protein LOC116401672 [Cucumis sativus]5.6e-11397.1Show/hide
Query:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
        MVDATTGHEALSFMDGSSGYNQIR+ALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLH+YVECYVDDLVVK+KRRQDHLKDLKVVFD
Subjt:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD

Query:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
        RLRKYQLRMNPLKCAFG+TSGKFLGFIVRHRGIEIDQSKIDAIQKM RPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENF+WDEACQNAFD
Subjt:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD

Query:  SIKKYLL
        SIKKYLL
Subjt:  SIKKYLL

TrEMBL top hitse value%identityAlignment
A0A5A7SPV8 Ribonuclease H2.7e-11397.1Show/hide
Query:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
        MVDATTGHE LSFMDGSSGYNQIR+ALSDEEMTAFRTPKGIYCYKV+PFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
Subjt:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD

Query:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
        RLRKYQLRMNPLKCAF +TSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENF+WDEACQNAFD
Subjt:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD

Query:  SIKKYLL
        SIKKYLL
Subjt:  SIKKYLL

A0A5A7V6G6 Reverse transcriptase domain-containing protein7.1e-130100Show/hide
Query:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
        MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
Subjt:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD

Query:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
        RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
Subjt:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD

Query:  SIKKYLLKLKNLVHIFAITAGRLLNSCSATK
        SIKKYLLKLKNLVHIFAITAGRLLNSCSATK
Subjt:  SIKKYLLKLKNLVHIFAITAGRLLNSCSATK

A0A5A7VKY8 Uncharacterized protein6.0e-11396.62Show/hide
Query:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
        MVDATTGHEALSFMDGSSGYNQIR+ALSDEE+TAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECY DDLVVKSKRRQDHLKDLKVVFD
Subjt:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD

Query:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
        RLRKYQLRMNPLKCAFG+TSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYI+RFISNLAGRCQPFQKLMRKGE F+WDEACQNAFD
Subjt:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD

Query:  SIKKYLL
        SIKKYLL
Subjt:  SIKKYLL

A0A5D3DYG9 Reverse transcriptase domain-containing protein7.1e-130100Show/hide
Query:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
        MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
Subjt:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD

Query:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
        RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
Subjt:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD

Query:  SIKKYLLKLKNLVHIFAITAGRLLNSCSATK
        SIKKYLLKLKNLVHIFAITAGRLLNSCSATK
Subjt:  SIKKYLLKLKNLVHIFAITAGRLLNSCSATK

A0A5D3DZI7 Uncharacterized protein6.0e-11396.62Show/hide
Query:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD
        MVDATTGHEALSFMDGSSGYNQIR+ALSDEE+TAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECY DDLVVKSKRRQDHLKDLKVVFD
Subjt:  MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFD

Query:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD
        RLRKYQLRMNPLKCAFG+TSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYI+RFISNLAGRCQPFQKLMRKGE F+WDEACQNAFD
Subjt:  RLRKYQLRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFD

Query:  SIKKYLL
        SIKKYLL
Subjt:  SIKKYLL

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein8.0e-3030.77Show/hide
Query:  GHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQ
        G    + +D  S Y+ IR+   DE   AFR P+G++ Y VMP+G+  A A +Q  +  +  +    +V CY+DD+++ SK   +H+K +K V  +L+   
Subjt:  GHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQ

Query:  LRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFDSIKKYL
        L +N  KC F  +  KF+G+ +  +G    Q  ID + +  +PK+  +LR   G + Y+R+FI   +    P   L++K   + W      A ++IK+ L
Subjt:  LRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFDSIKKYL

Query:  LKLKNLVH
        +    L H
Subjt:  LKLKNLVH

P0CT35 Transposon Tf2-2 polyprotein8.0e-3030.77Show/hide
Query:  GHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQ
        G    + +D  S Y+ IR+   DE   AFR P+G++ Y VMP+G+  A A +Q  +  +  +    +V CY+DD+++ SK   +H+K +K V  +L+   
Subjt:  GHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQ

Query:  LRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFDSIKKYL
        L +N  KC F  +  KF+G+ +  +G    Q  ID + +  +PK+  +LR   G + Y+R+FI   +    P   L++K   + W      A ++IK+ L
Subjt:  LRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFDSIKKYL

Query:  LKLKNLVH
        +    L H
Subjt:  LKLKNLVH

P0CT36 Transposon Tf2-3 polyprotein8.0e-3030.77Show/hide
Query:  GHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQ
        G    + +D  S Y+ IR+   DE   AFR P+G++ Y VMP+G+  A A +Q  +  +  +    +V CY+DD+++ SK   +H+K +K V  +L+   
Subjt:  GHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQ

Query:  LRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFDSIKKYL
        L +N  KC F  +  KF+G+ +  +G    Q  ID + +  +PK+  +LR   G + Y+R+FI   +    P   L++K   + W      A ++IK+ L
Subjt:  LRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFDSIKKYL

Query:  LKLKNLVH
        +    L H
Subjt:  LKLKNLVH

P0CT37 Transposon Tf2-4 polyprotein8.0e-3030.77Show/hide
Query:  GHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQ
        G    + +D  S Y+ IR+   DE   AFR P+G++ Y VMP+G+  A A +Q  +  +  +    +V CY+DD+++ SK   +H+K +K V  +L+   
Subjt:  GHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQ

Query:  LRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFDSIKKYL
        L +N  KC F  +  KF+G+ +  +G    Q  ID + +  +PK+  +LR   G + Y+R+FI   +    P   L++K   + W      A ++IK+ L
Subjt:  LRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFDSIKKYL

Query:  LKLKNLVH
        +    L H
Subjt:  LKLKNLVH

P0CT41 Transposon Tf2-12 polyprotein8.0e-3030.77Show/hide
Query:  GHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQ
        G    + +D  S Y+ IR+   DE   AFR P+G++ Y VMP+G+  A A +Q  +  +  +    +V CY+DD+++ SK   +H+K +K V  +L+   
Subjt:  GHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQ

Query:  LRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFDSIKKYL
        L +N  KC F  +  KF+G+ +  +G    Q  ID + +  +PK+  +LR   G + Y+R+FI   +    P   L++K   + W      A ++IK+ L
Subjt:  LRMNPLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFDSIKKYL

Query:  LKLKNLVH
        +    L H
Subjt:  LKLKNLVH

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATGCTACTACTGGACATGAGGCACTATCCTTTATGGATGGGTCGTCTGGATATAATCAAATACGAATTGCCCTTTCAGATGAAGAAATGACAGCTTTCAGGAC
TCCAAAGGGAATATATTGTTACAAGGTGATGCCCTTTGGATTAAAAAATGCTGGTGCCACTTATCAACGTGCTATGCAAAAAGTATTTGACGATATGCTACATAAATATG
TCGAGTGCTACGTTGATGACCTTGTGGTCAAATCCAAGAGACGACAAGACCATTTGAAGGATCTAAAAGTTGTGTTCGACCGCTTGCGAAAATATCAGTTGAGGATGAAC
CCTCTCAAATGCGCGTTCGGTTTAACTTCAGGAAAGTTTCTTGGCTTTATTGTAAGGCATCGAGGGATCGAGATAGACCAGTCCAAGATTGATGCCATTCAGAAGATGCC
AAGGCCAAAGAGTTTGCATGACCTAAGAAGTCTCCAGGGACGATTGGCTTACATTCGAAGGTTCATCTCCAACCTGGCTGGTCGGTGCCAACCTTTTCAAAAGTTGATGA
GAAAAGGAGAAAATTTTATGTGGGATGAGGCTTGTCAGAATGCTTTTGATAGCATAAAGAAATACTTGCTCAAACTGAAAAATCTTGTACATATATTTGCCATTACTGCA
GGGAGGTTGTTGAATTCTTGTTCAGCAACAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATGCTACTACTGGACATGAGGCACTATCCTTTATGGATGGGTCGTCTGGATATAATCAAATACGAATTGCCCTTTCAGATGAAGAAATGACAGCTTTCAGGAC
TCCAAAGGGAATATATTGTTACAAGGTGATGCCCTTTGGATTAAAAAATGCTGGTGCCACTTATCAACGTGCTATGCAAAAAGTATTTGACGATATGCTACATAAATATG
TCGAGTGCTACGTTGATGACCTTGTGGTCAAATCCAAGAGACGACAAGACCATTTGAAGGATCTAAAAGTTGTGTTCGACCGCTTGCGAAAATATCAGTTGAGGATGAAC
CCTCTCAAATGCGCGTTCGGTTTAACTTCAGGAAAGTTTCTTGGCTTTATTGTAAGGCATCGAGGGATCGAGATAGACCAGTCCAAGATTGATGCCATTCAGAAGATGCC
AAGGCCAAAGAGTTTGCATGACCTAAGAAGTCTCCAGGGACGATTGGCTTACATTCGAAGGTTCATCTCCAACCTGGCTGGTCGGTGCCAACCTTTTCAAAAGTTGATGA
GAAAAGGAGAAAATTTTATGTGGGATGAGGCTTGTCAGAATGCTTTTGATAGCATAAAGAAATACTTGCTCAAACTGAAAAATCTTGTACATATATTTGCCATTACTGCA
GGGAGGTTGTTGAATTCTTGTTCAGCAACAAAATAG
Protein sequenceShow/hide protein sequence
MVDATTGHEALSFMDGSSGYNQIRIALSDEEMTAFRTPKGIYCYKVMPFGLKNAGATYQRAMQKVFDDMLHKYVECYVDDLVVKSKRRQDHLKDLKVVFDRLRKYQLRMN
PLKCAFGLTSGKFLGFIVRHRGIEIDQSKIDAIQKMPRPKSLHDLRSLQGRLAYIRRFISNLAGRCQPFQKLMRKGENFMWDEACQNAFDSIKKYLLKLKNLVHIFAITA
GRLLNSCSATK