; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc02g0051651 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0051651
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCytochrome b559 subunit alpha
Genome locationCMiso1.1chr02:18373334..18373849
RNA-Seq ExpressionCmc02g0051651
SyntenyCmc02g0051651
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR013082 - Photosystem II cytochrome b559, alpha subunit, lumenal region
IPR037025 - Photosystem II cytochrome b559, alpha subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8735177.1 hypothetical protein HU200_014505 [Digitaria exilis]3.8e-1048.96Show/hide
Query:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT-RESPR------IKGSYVHASIVPPTKYV
        MSGSTGER                          WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT R  P       I+   VH   VP   ++
Subjt:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT-RESPR------IKGSYVHASIVPPTKYV

RDY14682.1 Cytochrome b559 subunit alpha, partial [Mucuna pruriens]5.3e-1281.63Show/hide
Query:  MSGSTGER--------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT
        MSGSTGER        WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT
Subjt:  MSGSTGER--------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT

YP_003587482.1 photosystem II cytochrome b559 alpha subunit [Oncidium hybrid cultivar]3.8e-1061.54Show/hide
Query:  MSGSTGER------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT
        MSGSTGER                        WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT
Subjt:  MSGSTGER------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT

YP_009164209.1 photosystem II cytochrome b559 alpha subunit [Viscum minimum]1.7e-1060.29Show/hide
Query:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLITR
        MSGSTGER                          WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLITR
Subjt:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLITR

YP_009385244.1 photosystem II cytochrome b559 alpha subunit [Pseudosorghum fasciculare]2.9e-1055.41Show/hide
Query:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLITRESPRIK
        MSGSTGER                          WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT     +K
Subjt:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLITRESPRIK

TrEMBL top hitse value%identityAlignment
A0A0M3L7V8 Cytochrome b559 subunit alpha8.3e-1160.29Show/hide
Query:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLITR
        MSGSTGER                          WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLITR
Subjt:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLITR

A0A0M5KPX3 Cytochrome b559 subunit alpha8.3e-1160.29Show/hide
Query:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLITR
        MSGSTGER                          WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLITR
Subjt:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLITR

A0A371IHZ6 Cytochrome b559 subunit alpha (Fragment)2.6e-1281.63Show/hide
Query:  MSGSTGER--------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT
        MSGSTGER        WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT
Subjt:  MSGSTGER--------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT

A0A6N2MND8 Cytochrome b559 subunit beta (Fragment)6.8e-1377.36Show/hide
Query:  MSGSTGER--------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLITRESP
        MSGSTGER        WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT   P
Subjt:  MSGSTGER--------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLITRESP

A0A6N2NLP9 Cytochrom_B559a domain-containing protein2.6e-1281.63Show/hide
Query:  MSGSTGER--------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT
        MSGSTGER        WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT
Subjt:  MSGSTGER--------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT

SwissProt top hitse value%identityAlignment
A1EA25 Cytochrome b559 subunit alpha8.5e-1359.7Show/hide
Query:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT
        MSGSTGER                          WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT
Subjt:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT

P56779 Cytochrome b559 subunit alpha8.5e-1359.7Show/hide
Query:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT
        MSGSTGER                          WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT
Subjt:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT

P59702 Cytochrome b559 subunit alpha8.5e-1359.7Show/hide
Query:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT
        MSGSTGER                          WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT
Subjt:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT

Q3V518 Cytochrome b559 subunit alpha8.5e-1359.7Show/hide
Query:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT
        MSGSTGER                          WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT
Subjt:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT

Q70XY9 Cytochrome b559 subunit alpha8.5e-1359.7Show/hide
Query:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT
        MSGSTGER                          WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT
Subjt:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT

Arabidopsis top hitse value%identityAlignment
ATCG00580.1 photosystem II reaction center protein E6.1e-1459.7Show/hide
Query:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT
        MSGSTGER                          WLFVSTGLAYDVFGSPRPNEYFT+SRQGIPLIT
Subjt:  MSGSTGER--------------------------WLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGAAGCACAGGAGAACGTTGGTTATTCGTCAGCACGGGTTTAGCTTACGATGTTTTCGGAAGCCCTCGTCCAAATGAGTATTTTACAAAGAGTCGACAAGGAAT
TCCATTAATAACTAGGGAATCGCCCAGGATCAAGGGCTCGTATGTCCACGCCTCAATCGTCCCTCCGACGAAATATGTGCTTCTAAAAGATCTTTTATACTGTGTCCAAT
CCCGAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGAAGCACAGGAGAACGTTGGTTATTCGTCAGCACGGGTTTAGCTTACGATGTTTTCGGAAGCCCTCGTCCAAATGAGTATTTTACAAAGAGTCGACAAGGAAT
TCCATTAATAACTAGGGAATCGCCCAGGATCAAGGGCTCGTATGTCCACGCCTCAATCGTCCCTCCGACGAAATATGTGCTTCTAAAAGATCTTTTATACTGTGTCCAAT
CCCGAAGTTAGTTATATACATATGACCAGCAACAAGAAAAATAAATGCAATAGCTAAATGATGATGAGCCATATCAGTCAGCCATAAACTTTGCGTTTGCTGATGGAATC
CACCGAGAAGGGTTAGAATGGCAGTTCCTGCTCCTTCGGAAGTACCAAATAAATGATTATTTGAATCGGGGTCTTGAGCATAAAGATTCCACTTACCTGTAAAAAGTT
Protein sequenceShow/hide protein sequence
MSGSTGERWLFVSTGLAYDVFGSPRPNEYFTKSRQGIPLITRESPRIKGSYVHASIVPPTKYVLLKDLLYCVQSRS