| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO73521.1 gag-pol polyprotein [Glycine max] | 9.8e-158 | 67.25 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
MDV SAFLNGYLNEE YV QPKGF D HP HVY+L KALY +KQAPRAWYERLT +L +GY KG IDKTLF+ + ++ L++AQIYVDDI+FGG ++
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
+ +F+ MQSEFEMS+VGEL+ L LQ+KQ D IF+SQ +YAKN+VKKFG+E A +KR A TH+KL++D GT VD LYRS++GSLLYLTASR DI
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
YAVG+C RYQ +P+I HL VK+ILKYV+ TSD+G++Y + + P L+GYCD DWAGS DDRKSTSGGCF+LGNNLISW SKK N VSLSTAE EYIAAGS
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVC
C+QL+WMK ML EY+ +QD+MTLYCDNMSAI+ KNPVQHSRTKHI+IRHH+IR+LV+DKVI L H+ + Q+ DIFTK LDAN FE LR LG+C
Subjt: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVC
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| AAO73529.1 gag-pol polyprotein [Glycine max] | 5.8e-158 | 67.76 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
MDV SAFLNGYLNEEAYV QPKGFVD HP HVY+L KALY +KQAPRAWYERLT +L +GY KG IDKTLF+ + ++ L++AQIYVDDI+FGG ++
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
+ +F+ MQSEFEMS+VGEL+ L LQ+KQ D IF+SQ KYAKN+VKKFG+E A +KR A TH+KL++D GT VD LYRS++GSLLYLTASR DI
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
YAVG+C RYQ +P+I HL VK+ILKYV+ TSD+G++Y + + L+GYCD DWAGS DDRKSTSGGCF+LGNNLISW SKK N VSLSTAE EYIAAGS
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVC
C+QL+WMK ML EY+ +QD+MTLYCDNMSAI+ KNPVQHSRTKHI+IRHH+IRELV+DKVI L+H+ + Q+ DIFTK LDA FE LR LG+C
Subjt: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVC
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| KAA0066405.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.4e-158 | 77.36 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
MDV S FLNGYLNEE YVAQPKGFVDSEHPKH+YK NKALY +KQA RAWY+ LTVYLRGKGYS+GEIDKTLFI+RKSD+LLV QIYVDDIIFGGFPQDL
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
VNNFINIMQSEF+MSMVGELSC L LQIKQ NDDIFISQEKY +NMVKKFGLEQARNKR A THVKLT+DT+ EVDHKLYRSI+GSLLYLTASR DIA
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Y VGIC RYQVDP I HL AVK ILKYVH TSDFGM+Y YDTT TL+GYCD DW GS DDRK+T S E EYIAAGS
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSN
GCTQLIW KNML EY FDQD MTLYCDNMSAID NPVQHSRT+HI+IRHHFI ELV+DKVI+LDHI SN
Subjt: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSN
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| KAA0066740.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 2.8e-173 | 78.48 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
MDV S FLNGYLNEE YVAQPKGFVDSEH KHVYKLNKALY +KQAPRAWY+ LTVYLRGKGYS+GEIDKTLFIHRKSD+LLVAQIYVDDIIFGGFPQDL
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
VNNFINIMQSEFEMSMVGEL C L LQI+QKNDDIFISQ+KYA+N+VKKFGLEQARNKR A THVKLT+D +G EVDHKLYRSIVGSLLYLTASR DIA
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
YA+GI RYQV PRI HLEA+K+ILKYVH+T DFGM+Y YDTTPTL+GYCD DWAGS DDRK E EYIAAGS
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLG
GCTQLIWMKN+LHEY FDQD MTLYC+NMSAID KN VQHSRTKHI+IRHHFIRE VE+KVI+LDHIRSNLQL +IFTKPLDA+SFE+L AGLG
Subjt: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLG
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| TYK23188.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 1.0e-186 | 86.02 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
MDV SAFLNGYLNEE YVAQPK FVDSEHPKHVYKLNKALY +KQAPR WYERLTVYLRGKGYS+GEIDKTLFIHRKSD+LLVAQIYVDDIIFGGFP DL
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
VNNFINIMQSEFEMSMVGELSC L QIKQKNDDI ISQ+KYAKNM KKFGLEQARNKR AATHVKLTRD DG EVDHKLYRSIV +LLYLTASR DIA
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
YAVGIC RYQ DPRI HLEAVK+ILKYVH T+DFGM+Y YDTTPTL+GYCD DWAG DDRKSTSGGCFFLGNNLI WLSKK N VSLST E EYI AGS
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFT
GCTQLIWM+N+L EY FDQ +TLY DNMSAID KNPVQHSR KHI+IRHHFIRELVEDKVIRLDHIRSNLQL DIFT
Subjt: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5D3BPB5 Gag-pol polyprotein | 2.1e-158 | 77.36 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
MDV S FLNGYLNEE YVAQPKGFVDSEHPKH+YK NKALY +KQA RAWY+ LTVYLRGKGYS+GEIDKTLFI+RKSD+LLV QIYVDDIIFGGFPQDL
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
VNNFINIMQSEF+MSMVGELSC L LQIKQ NDDIFISQEKY +NMVKKFGLEQARNKR A THVKLT+DT+ EVDHKLYRSI+GSLLYLTASR DIA
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Y VGIC RYQVDP I HL AVK ILKYVH TSDFGM+Y YDTT TL+GYCD DW GS DDRK+T S E EYIAAGS
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSN
GCTQLIW KNML EY FDQD MTLYCDNMSAID NPVQHSRT+HI+IRHHFI ELV+DKVI+LDHI SN
Subjt: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSN
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| A0A5D3DI97 Gag-pol polyprotein | 4.9e-187 | 86.02 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
MDV SAFLNGYLNEE YVAQPK FVDSEHPKHVYKLNKALY +KQAPR WYERLTVYLRGKGYS+GEIDKTLFIHRKSD+LLVAQIYVDDIIFGGFP DL
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
VNNFINIMQSEFEMSMVGELSC L QIKQKNDDI ISQ+KYAKNM KKFGLEQARNKR AATHVKLTRD DG EVDHKLYRSIV +LLYLTASR DIA
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
YAVGIC RYQ DPRI HLEAVK+ILKYVH T+DFGM+Y YDTTPTL+GYCD DWAG DDRKSTSGGCFFLGNNLI WLSKK N VSLST E EYI AGS
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFT
GCTQLIWM+N+L EY FDQ +TLY DNMSAID KNPVQHSR KHI+IRHHFIRELVEDKVIRLDHIRSNLQL DIFT
Subjt: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFT
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| A0A5D3DWS6 Gag-pol polyprotein | 1.4e-173 | 78.48 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
MDV S FLNGYLNEE YVAQPKGFVDSEH KHVYKLNKALY +KQAPRAWY+ LTVYLRGKGYS+GEIDKTLFIHRKSD+LLVAQIYVDDIIFGGFPQDL
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
VNNFINIMQSEFEMSMVGEL C L LQI+QKNDDIFISQ+KYA+N+VKKFGLEQARNKR A THVKLT+D +G EVDHKLYRSIVGSLLYLTASR DIA
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
YA+GI RYQV PRI HLEA+K+ILKYVH+T DFGM+Y YDTTPTL+GYCD DWAGS DDRK E EYIAAGS
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLG
GCTQLIWMKN+LHEY FDQD MTLYC+NMSAID KN VQHSRTKHI+IRHHFIRE VE+KVI+LDHIRSNLQL +IFTKPLDA+SFE+L AGLG
Subjt: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLG
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| Q84VH6 Gag-pol polyprotein | 2.8e-158 | 67.76 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
MDV SAFLNGYLNEEAYV QPKGFVD HP HVY+L KALY +KQAPRAWYERLT +L +GY KG IDKTLF+ + ++ L++AQIYVDDI+FGG ++
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
+ +F+ MQSEFEMS+VGEL+ L LQ+KQ D IF+SQ KYAKN+VKKFG+E A +KR A TH+KL++D GT VD LYRS++GSLLYLTASR DI
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
YAVG+C RYQ +P+I HL VK+ILKYV+ TSD+G++Y + + L+GYCD DWAGS DDRKSTSGGCF+LGNNLISW SKK N VSLSTAE EYIAAGS
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVC
C+QL+WMK ML EY+ +QD+MTLYCDNMSAI+ KNPVQHSRTKHI+IRHH+IRELV+DKVI L+H+ + Q+ DIFTK LDA FE LR LG+C
Subjt: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVC
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| Q84VI4 Gag-pol polyprotein | 4.8e-158 | 67.25 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
MDV SAFLNGYLNEE YV QPKGF D HP HVY+L KALY +KQAPRAWYERLT +L +GY KG IDKTLF+ + ++ L++AQIYVDDI+FGG ++
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
+ +F+ MQSEFEMS+VGEL+ L LQ+KQ D IF+SQ +YAKN+VKKFG+E A +KR A TH+KL++D GT VD LYRS++GSLLYLTASR DI
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
YAVG+C RYQ +P+I HL VK+ILKYV+ TSD+G++Y + + P L+GYCD DWAGS DDRKSTSGGCF+LGNNLISW SKK N VSLSTAE EYIAAGS
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVC
C+QL+WMK ML EY+ +QD+MTLYCDNMSAI+ KNPVQHSRTKHI+IRHH+IR+LV+DKVI L H+ + Q+ DIFTK LDAN FE LR LG+C
Subjt: GCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVC
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.9e-58 | 34.73 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKS--DKLLVAQIYVDDIIFGGFPQ
MDV +AFLNG L EE Y+ P+G S + +V KLNKA+Y +KQA R W+E L+ + +D+ ++I K ++ + +YVDD++
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKS--DKLLVAQIYVDDIIFGGFPQ
Query: DLVNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHV--KLTRDTDGTEVD-HKLYRSIVGSLLY-LTA
+NNF + +F M+ + E+ + ++I+ + D I++SQ Y K ++ KF +E N +T + K+ + ++ D + RS++G L+Y +
Subjt: DLVNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHV--KLTRDTDGTEVD-HKLYRSIVGSLLY-LTA
Query: SRSDIAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTT--PTLIGYCDVDWAGSVDDRKSTSGGCFFLGN-NLISWLSKKHNYVSLSTA
+R D+ AV I RY + +K++L+Y+ T D +I+ + +IGY D DWAGS DRKST+G F + + NLI W +K+ N V+ S+
Subjt: SRSDIAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTT--PTLIGYCDVDWAGSVDDRKSTSGGCFFLGN-NLISWLSKKHNYVSLSTA
Query: ETEYIAAGSGCTQLIWMKNMLHEYDFD-QDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHL
E EY+A + +W+K +L + ++ + +Y DN I NP H R KHI+I++HF RE V++ VI L++I + QL DIFTKPL A F L
Subjt: ETEYIAAGSGCTQLIWMKNMLHEYDFD-QDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHL
Query: RAGLGV
R LG+
Subjt: RAGLGV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-69 | 36.95 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSD-KLLVAQIYVDDIIFGGFPQD
+DV +AFL+G L EE Y+ QP+GF + V KLNK+LY +KQAPR WY + +++ + Y K D ++ R S+ ++ +YVDD++ G +
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSD-KLLVAQIYVDDIIFGGFPQD
Query: LVNNFINIMQSEFEMSMVGELSCLLDLQI--KQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHK------LYRSIVGSLLY
L+ + F+M +G +L ++I ++ + +++SQEKY + ++++F ++ A+ A H+KL++ T V+ K Y S VGSL+Y
Subjt: LVNNFINIMQSEFEMSMVGELSCLLDLQI--KQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHK------LYRSIVGSLLY
Query: -LTASRSDIAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLST
+ +R DIA+AVG+ R+ +P H EAVK IL+Y+ T+ + F + P L GY D D AG +D+RKS++G F ISW SK V+LST
Subjt: -LTASRSDIAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLST
Query: AETEYIAAGSGCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHL
E EYIAA ++IW+K L E Q +YCD+ SAID KN + H+RTKHI++R+H+IRE+V+D+ +++ I +N D+ TK + N FE
Subjt: AETEYIAAGSGCTQLIWMKNMLHEYDFDQDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHL
Query: RAGLGV
+ +G+
Subjt: RAGLGV
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| P25600 Putative transposon Ty5-1 protein YCL074W | 3.3e-31 | 29.57 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
MDV++AFLN ++E YV QP GFV+ +P +V++L +Y +KQAP W E + L+ G+ + E + L+ SD + +YVDD++ +
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQ-KNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLY-LTASRSD
+ + + M +G++ L L I Q N DI +S + Y + + + + L T D Y+SIVG LL+ R D
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQ-KNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLY-LTASRSD
Query: IAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKK-HNYVSLSTAETEYIA
I+Y V + R+ +PR HLE+ +++L+Y++ T + Y + L YCD D ST G L ++W SKK + + + E EYI
Subjt: IAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKK-HNYVSLSTAETEYIA
Query: A
A
Subjt: A
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.4e-68 | 36.34 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
+DVN+AFL G L ++ Y++QP GF+D + P +V KL KALY +KQAPRAWY L YL G+ D +LF+ ++ ++ +YVDDI+ G L
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
++N ++ + F + EL L ++ K+ + +SQ +Y +++ + + A+ A KL+ + D YR IVGSL YL +R DI+
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
YAV ++ P HL+A+K+IL+Y+ T + G+ T +L Y D DWAG DD ST+G +LG++ ISW SKK V S+ E EY + +
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFDQDL-MTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVCR
+++ W+ ++L E +YCDN+ A NPV HSR KHI I +HFIR V+ +R+ H+ ++ QL D TKPL +F++ + +GV R
Subjt: GCTQLIWMKNMLHEYDFDQDL-MTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVCR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.4e-68 | 35.84 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
+DVN+AFL G L +E Y++QP GFVD + P +V +L KA+Y +KQAPRAWY L YL G+ D +LF+ ++ ++ +YVDDI+ G L
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFVDSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGFPQDL
Query: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
+ + ++ + F + +L L ++ K+ + +SQ +Y +++ + + A+ AT KLT + D YR IVGSL YL +R D++
Subjt: VNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASRSDIA
Query: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
YAV +Y P H A+K++L+Y+ T D G+ T +L Y D DWAG DD ST+G +LG++ ISW SKK V S+ E EY + +
Subjt: YAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYIAAGS
Query: GCTQLIWMKNMLHEYDFD-QDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVCR
++L W+ ++L E +YCDN+ A NPV HSR KHI + +HFIR V+ +R+ H+ ++ QL D TKPL +F++ +GV +
Subjt: GCTQLIWMKNMLHEYDFD-QDLMTLYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRELVEDKVIRLDHIRSNLQLTDIFTKPLDANSFEHLRAGLGVCR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.4e-53 | 35.18 | Show/hide |
Query: MDVNSAFLNGYLNEEAYVAQPKGFV----DSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGF
+D+++AFLNG L+EE Y+ P G+ DS P V L K++Y +KQA R W+ + +V L G G+ + D T F+ + L +YVDDII
Subjt: MDVNSAFLNGYLNEEAYVAQPKGFV----DSEHPKHVYKLNKALYVVKQAPRAWYERLTVYLRGKGYSKGEIDKTLFIHRKSDKLLVAQIYVDDIIFGGF
Query: PQDLVNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASR
V+ + ++S F++ +G L L L+I + I I Q KYA +++ + GL + V + + G VD K YR ++G L+YL +R
Subjt: PQDLVNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEVDHKLYRSIVGSLLYLTASR
Query: SDIAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYI
DI++AV ++ PR+ H +AV +IL Y+ T G+ Y L + D + D R+ST+G C FLG +LISW SKK VS S+AE EY
Subjt: SDIAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHNYVSLSTAETEYI
Query: AAGSGCTQLIWMKNMLHEYDFDQDLMT-LYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRE
A +++W+ E T L+CDN +AI N V H RTKHI H +RE
Subjt: AAGSGCTQLIWMKNMLHEYDFDQDLMT-LYCDNMSAIDKWKNPVQHSRTKHINIRHHFIRE
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 5.8e-07 | 32.95 | Show/hide |
Query: LYLTASRSDIAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGC-----FFLG
+YLT +R D+ +AV ++ R ++AV ++L YV T G+ Y + L + D DWA D R+S +G C +FLG
Subjt: LYLTASRSDIAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGC-----FFLG
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.0e-32 | 35.87 | Show/hide |
Query: IYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEV-DHKLYRS
+YVDDI+ G L+N I + S F M +G + L +QIK +F+SQ KYA+ ++ G+ K +KL + D +RS
Subjt: IYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGELSCLLDLQIKQKNDDIFISQEKYAKNMVKKFGLEQARNKRNLAATHVKLTRDTDGTEV-DHKLYRS
Query: IVGSLLYLTASRSDIAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHN
IVG+L YLT +R DI+YAV I + +P + + +K++L+YV T G+ ++ + +CD DWAG R+ST+G C FLG N+ISW +K+
Subjt: IVGSLLYLTASRSDIAYAVGICVRYQVDPRIPHLEAVKQILKYVHKTSDFGMIYFYDTTPTLIGYCDVDWAGSVDDRKSTSGGCFFLGNNLISWLSKKHN
Query: YVSLSTAETEYIAAGSGCTQLIW
VS S+ ETEY A +L W
Subjt: YVSLSTAETEYIAAGSGCTQLIW
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