CuGenDBv2

Gene ID	Cmc02g0052361
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transposon Tf2-6 polyprotein
Genome location	CMiso1.1chr02:19687428..19689368
RNA-Seq Expression	Cmc02g0052361
Synteny	Cmc02g0052361
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0015074 - DNA integration (biological process) GO:0005852 - eukaryotic translation initiation factor 3 complex (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function)
InterPro domains	IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR016197 - Chromo-like domain superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0047643.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]

0.0e+00

95.67

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETD S FGV AVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVK DQKSLK LLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKA DALSR+PPDIQLNSIS+PYWMDLETIKEEVE DEKLKKI ASLN+EDE QT+KFTIKNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL
        IPAILNTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVIL+VVDRL
Subjt:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL

Query:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL
        SKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQT GQTEVVNRGLETYLRCFCSE PKEWI+WL
Subjt:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL

Query:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL
        PWAEYWYNTTYQKALG+SPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKE++VALDALREHLLLAQQQMKLYADRKRRQVEFQV+ELVLLKIRPYR ATL
Subjt:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL

Query:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE
        RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVA KNLPDYE
Subjt:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE

Query:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
        ASWEDYDEM+QRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
Subjt:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN

KAA0060678.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]

0.0e+00

95.98

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDAS FGV AVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLK LLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
        QK LSKLLGYSFEVVYKPGLENKAADALSR+PPDIQLN+IS+PYWMDLETIKEEVEKDEKLKKI  SLNEEDE QTSKFTIKNSLLHYKNRLVI KASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL
        IPAILNTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVKKH EACVTCQRNKSLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVIL+VVDRL
Subjt:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL

Query:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL
        SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQT GQTEVVNRGLETYLRCFCSE PKEWI+WL
Subjt:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL

Query:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL
        PWAEYWYNTTYQKALG+SPFQVVYGRKPP LLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYR ATL
Subjt:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL

Query:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE
        RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQ NIVPTLQNITEKLEWQSQPEEARDYRQDKT KWEVLVA KNLPDYE
Subjt:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE

Query:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
        ASWEDYDEM+QRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
Subjt:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN

KAA0064689.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]

0.0e+00

95.05

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDAS FGV AVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLK LLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKAADALSR+PPDI LNSISVPYWMDLETIK+EVEKDEKLKKIVASL +EDE+QTSKFT+KNSLLHYKNRLVISK SSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL
        IPAILNTFHDSVV GHSGFLRT KRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSP GLLMPL+IPHQIWSDISMDFIDGLPKAKGWDVIL+VVDRL
Subjt:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL

Query:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL
        SKYSHFLALKHPYTAKTVAE FVKEIVRLHGFPTSIVS+RDKVFLSHFWNELFKMAGTKLKKSTAYHPQT GQTEVVNRGLETYLRCFCSE PKEWILWL
Subjt:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL

Query:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL
        PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQV ELVLLKIRPYR AT 
Subjt:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL

Query:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE
        RSKRNEKLSSRYFGPYKILERI EVAYRLELPTDAAIHPVFHVSQLKKFVNQQ+NI+PTLQNITEKLEWQSQPEEARDYRQDKTGKWEVL+A KNL DYE
Subjt:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE

Query:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
        ASWEDYDEMNQRYP+LHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
Subjt:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN

TYK08301.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa]

0.0e+00

95.98

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETD S FGV AVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVK DQKSLK LLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKA DALSR+PPDIQLNSIS+PYWMDLETIKEEVE DEKLKKI ASLN+EDE QTSKFTIKNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRLS
        IPAILNTFHDSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVIL+VVDRLS
Subjt:  IPAILNTFHDSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRLS

Query:  KYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWLP
        KYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQT GQTEVVNRGLETYLRCFCSE PKEWI+WLP
Subjt:  KYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWLP

Query:  WAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATLR
        WAEYWYNTTYQKALG+SPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKE++VALDALREHLLLAQQQMKLYADRKRRQVEFQV+ELVLLKIRPYR ATLR
Subjt:  WAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATLR

Query:  SKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYEA
        SKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVA KNLPDYEA
Subjt:  SKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYEA

Query:  SWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
        SWEDYDEM+QRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
Subjt:  SWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN

TYK23779.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]

0.0e+00

97.17

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDAS FGV AVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLK LLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKAADALSR+PPDIQLNSIS+PYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL
        IPAI+NTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSP GLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVIL+VVDRL
Subjt:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL

Query:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL
        SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQT GQTEVVNRGLETYLRCFCSE PKEWILWL
Subjt:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL

Query:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL
        PWAEYWYNTTYQKALGKSPFQVVYG KPP LLSYGERRTSNSSIDEQLKER+VALDALREHLLLAQQQMKLYADRKRRQVEFQVD+LVLLKIRPYR ATL
Subjt:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL

Query:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE
        RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVA KNLPDYE
Subjt:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE

Query:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIK
        ASWEDYDEM+QRYPNLHLEDKVNLKGGSNVRPPIK
Subjt:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TVR3 Putative retroelement pol polyprotein

0.0e+00

95.67

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETD S FGV AVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVK DQKSLK LLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKA DALSR+PPDIQLNSIS+PYWMDLETIKEEVE DEKLKKI ASLN+EDE QT+KFTIKNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL
        IPAILNTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVIL+VVDRL
Subjt:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL

Query:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL
        SKYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQT GQTEVVNRGLETYLRCFCSE PKEWI+WL
Subjt:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL

Query:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL
        PWAEYWYNTTYQKALG+SPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKE++VALDALREHLLLAQQQMKLYADRKRRQVEFQV+ELVLLKIRPYR ATL
Subjt:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL

Query:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE
        RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVA KNLPDYE
Subjt:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE

Query:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
        ASWEDYDEM+QRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
Subjt:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN

A0A5A7UZJ7 Putative retroelement pol polyprotein

0.0e+00

95.98

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDAS FGV AVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLK LLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
        QK LSKLLGYSFEVVYKPGLENKAADALSR+PPDIQLN+IS+PYWMDLETIKEEVEKDEKLKKI  SLNEEDE QTSKFTIKNSLLHYKNRLVI KASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL
        IPAILNTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVKKH EACVTCQRNKSLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVIL+VVDRL
Subjt:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL

Query:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL
        SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQT GQTEVVNRGLETYLRCFCSE PKEWI+WL
Subjt:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL

Query:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL
        PWAEYWYNTTYQKALG+SPFQVVYGRKPP LLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYR ATL
Subjt:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL

Query:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE
        RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQ NIVPTLQNITEKLEWQSQPEEARDYRQDKT KWEVLVA KNLPDYE
Subjt:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE

Query:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
        ASWEDYDEM+QRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
Subjt:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN

A0A5A7VGU4 Putative retroelement pol polyprotein

0.0e+00

95.05

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDAS FGV AVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLK LLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKAADALSR+PPDI LNSISVPYWMDLETIK+EVEKDEKLKKIVASL +EDE+QTSKFT+KNSLLHYKNRLVISK SSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL
        IPAILNTFHDSVV GHSGFLRT KRLASELYWEGMKSDVKKHCE+C+TCQRNKSLALSP GLLMPL+IPHQIWSDISMDFIDGLPKAKGWDVIL+VVDRL
Subjt:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL

Query:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL
        SKYSHFLALKHPYTAKTVAE FVKEIVRLHGFPTSIVS+RDKVFLSHFWNELFKMAGTKLKKSTAYHPQT GQTEVVNRGLETYLRCFCSE PKEWILWL
Subjt:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL

Query:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL
        PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQV ELVLLKIRPYR AT 
Subjt:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL

Query:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE
        RSKRNEKLSSRYFGPYKILERI EVAYRLELPTDAAIHPVFHVSQLKKFVNQQ+NI+PTLQNITEKLEWQSQPEEARDYRQDKTGKWEVL+A KNL DYE
Subjt:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE

Query:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
        ASWEDYDEMNQRYP+LHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
Subjt:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN

A0A5D3C8Y2 Putative retroelement pol polyprotein

0.0e+00

95.98

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETD S FGV AVLIQ+KRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVK DQKSLK LLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKA DALSR+PPDIQLNSIS+PYWMDLETIKEEVE DEKLKKI ASLN+EDE QTSKFTIKNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRLS
        IPAILNTFHDSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLL+PLDIPHQIWSDISMDFIDGLPKAKGWDVIL+VVDRLS
Subjt:  IPAILNTFHDSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRLS

Query:  KYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWLP
        KYSHFL LKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQT GQTEVVNRGLETYLRCFCSE PKEWI+WLP
Subjt:  KYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWLP

Query:  WAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATLR
        WAEYWYNTTYQKALG+SPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKE++VALDALREHLLLAQQQMKLYADRKRRQVEFQV+ELVLLKIRPYR ATLR
Subjt:  WAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATLR

Query:  SKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYEA
        SKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVA KNLPDYEA
Subjt:  SKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYEA

Query:  SWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
        SWEDYDEM+QRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN
Subjt:  SWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN

A0A5D3DKH5 Ty3/gypsy retrotransposon protein

0.0e+00

97.17

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY
        MMSLPTLALPNFTLPFEIETDAS FGV AVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLK LLEQRVIQPQY
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQY

Query:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
        QKWLSKLLGYSFEVVYKPGLENKAADALSR+PPDIQLNSIS+PYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL
Subjt:  QKWLSKLLGYSFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSL

Query:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL
        IPAI+NTFHDSVV GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSP GLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVIL+VVDRL
Subjt:  IPAILNTFHDSVV-GHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRL

Query:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL
        SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQT GQTEVVNRGLETYLRCFCSE PKEWILWL
Subjt:  SKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWL

Query:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL
        PWAEYWYNTTYQKALGKSPFQVVYG KPP LLSYGERRTSNSSIDEQLKER+VALDALREHLLLAQQQMKLYADRKRRQVEFQVD+LVLLKIRPYR ATL
Subjt:  PWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATL

Query:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE
        RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVA KNLPDYE
Subjt:  RSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVNQQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYE

Query:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIK
        ASWEDYDEM+QRYPNLHLEDKVNLKGGSNVRPPIK
Subjt:  ASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

3.9e-66

30.61

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKTDQKSL--KILL
        ++S P L   +F+    +ETDASD  V AVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F + TD ++L  +I  
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKTDQKSL--KILL

Query:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------KPPDIQLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLNEEDEDQTSKF
        E      +  +W   L  ++FE+ Y+PG  N  ADALSR        P D + NSI+    + +       +  E   D KL  +   LN ED+      
Subjt:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------KPPDIQLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLNEEDEDQTSKF

Query:  TIKNSLL-HYKNRLVISKASSLIPAILNTFH-DSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISM
         +K+ LL + K+++++   + L   I+  +H +  + H G       +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SM
Subjt:  TIKNSLL-HYKNRLVISKASSLIPAILNTFH-DSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISM

Query:  DFIDGLPKAKGWDVILMVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVN
        DFI  LP++ G++ + +VVDR SK +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQT GQTE  N
Subjt:  DFIDGLPKAKGWDVILMVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVN

Query:  RGLETYLRCFCSEHPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRR
        + +E  LRC CS HP  W+  +   +  YN     A   +PF++V+   P   LS  E  + +   DE  +E       ++EHL     +MK Y D K +
Subjt:  RGLETYLRCFCSEHPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRR

Query:  QV-EFQVDELVLLKIRPYRHATLRSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIH---PVFHVSQLKKF
        ++ EFQ  +LV++K    R  T    ++ KL+  + GP+ +L++ G   Y L+LP D+  H     FHVS L+K+
Subjt:  QV-EFQVDELVLLKIRPYRHATLRSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIH---PVFHVSQLKKF

P0CT35 Transposon Tf2-2 polyprotein

3.9e-66

30.61

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKTDQKSL--KILL
        ++S P L   +F+    +ETDASD  V AVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F + TD ++L  +I  
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKTDQKSL--KILL

Query:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------KPPDIQLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLNEEDEDQTSKF
        E      +  +W   L  ++FE+ Y+PG  N  ADALSR        P D + NSI+    + +       +  E   D KL  +   LN ED+      
Subjt:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------KPPDIQLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLNEEDEDQTSKF

Query:  TIKNSLL-HYKNRLVISKASSLIPAILNTFH-DSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISM
         +K+ LL + K+++++   + L   I+  +H +  + H G       +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SM
Subjt:  TIKNSLL-HYKNRLVISKASSLIPAILNTFH-DSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISM

Query:  DFIDGLPKAKGWDVILMVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVN
        DFI  LP++ G++ + +VVDR SK +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQT GQTE  N
Subjt:  DFIDGLPKAKGWDVILMVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVN

Query:  RGLETYLRCFCSEHPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRR
        + +E  LRC CS HP  W+  +   +  YN     A   +PF++V+   P   LS  E  + +   DE  +E       ++EHL     +MK Y D K +
Subjt:  RGLETYLRCFCSEHPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRR

Query:  QV-EFQVDELVLLKIRPYRHATLRSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIH---PVFHVSQLKKF
        ++ EFQ  +LV++K    R  T    ++ KL+  + GP+ +L++ G   Y L+LP D+  H     FHVS L+K+
Subjt:  QV-EFQVDELVLLKIRPYRHATLRSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIH---PVFHVSQLKKF

P0CT36 Transposon Tf2-3 polyprotein

3.9e-66

30.61

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKTDQKSL--KILL
        ++S P L   +F+    +ETDASD  V AVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F + TD ++L  +I  
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKTDQKSL--KILL

Query:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------KPPDIQLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLNEEDEDQTSKF
        E      +  +W   L  ++FE+ Y+PG  N  ADALSR        P D + NSI+    + +       +  E   D KL  +   LN ED+      
Subjt:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------KPPDIQLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLNEEDEDQTSKF

Query:  TIKNSLL-HYKNRLVISKASSLIPAILNTFH-DSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISM
         +K+ LL + K+++++   + L   I+  +H +  + H G       +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SM
Subjt:  TIKNSLL-HYKNRLVISKASSLIPAILNTFH-DSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISM

Query:  DFIDGLPKAKGWDVILMVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVN
        DFI  LP++ G++ + +VVDR SK +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQT GQTE  N
Subjt:  DFIDGLPKAKGWDVILMVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVN

Query:  RGLETYLRCFCSEHPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRR
        + +E  LRC CS HP  W+  +   +  YN     A   +PF++V+   P   LS  E  + +   DE  +E       ++EHL     +MK Y D K +
Subjt:  RGLETYLRCFCSEHPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRR

Query:  QV-EFQVDELVLLKIRPYRHATLRSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIH---PVFHVSQLKKF
        ++ EFQ  +LV++K    R  T    ++ KL+  + GP+ +L++ G   Y L+LP D+  H     FHVS L+K+
Subjt:  QV-EFQVDELVLLKIRPYRHATLRSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIH---PVFHVSQLKKF

P0CT41 Transposon Tf2-12 polyprotein

3.9e-66

30.61

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKTDQKSL--KILL
        ++S P L   +F+    +ETDASD  V AVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F + TD ++L  +I  
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKTDQKSL--KILL

Query:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------KPPDIQLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLNEEDEDQTSKF
        E      +  +W   L  ++FE+ Y+PG  N  ADALSR        P D + NSI+    + +       +  E   D KL  +   LN ED+      
Subjt:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------KPPDIQLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLNEEDEDQTSKF

Query:  TIKNSLL-HYKNRLVISKASSLIPAILNTFH-DSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISM
         +K+ LL + K+++++   + L   I+  +H +  + H G       +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SM
Subjt:  TIKNSLL-HYKNRLVISKASSLIPAILNTFH-DSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISM

Query:  DFIDGLPKAKGWDVILMVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVN
        DFI  LP++ G++ + +VVDR SK +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQT GQTE  N
Subjt:  DFIDGLPKAKGWDVILMVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVN

Query:  RGLETYLRCFCSEHPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRR
        + +E  LRC CS HP  W+  +   +  YN     A   +PF++V+   P   LS  E  + +   DE  +E       ++EHL     +MK Y D K +
Subjt:  RGLETYLRCFCSEHPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRR

Query:  QV-EFQVDELVLLKIRPYRHATLRSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIH---PVFHVSQLKKF
        ++ EFQ  +LV++K    R  T    ++ KL+  + GP+ +L++ G   Y L+LP D+  H     FHVS L+K+
Subjt:  QV-EFQVDELVLLKIRPYRHATLRSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIH---PVFHVSQLKKF

Q9UR07 Transposon Tf2-11 polyprotein

3.9e-66

30.61

Show/hide

Query:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKTDQKSL--KILL
        ++S P L   +F+    +ETDASD  V AVL Q        P+ +YS  +S       V ++E++A++ S++ WR YL      F + TD ++L  +I  
Subjt:  MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSK-----RPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGA--KFVVKTDQKSL--KILL

Query:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------KPPDIQLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLNEEDEDQTSKF
        E      +  +W   L  ++FE+ Y+PG  N  ADALSR        P D + NSI+    + +       +  E   D KL  +   LN ED+      
Subjt:  EQRVIQPQYQKWLSKLLGYSFEVVYKPGLENKAADALSR-------KPPDIQLNSISVPYWMDL-----ETIKEEVEKDEKLKKIVASLNEEDEDQTSKF

Query:  TIKNSLL-HYKNRLVISKASSLIPAILNTFH-DSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISM
         +K+ LL + K+++++   + L   I+  +H +  + H G       +     W+G++  ++++ + C TCQ NKS    P G L P+    + W  +SM
Subjt:  TIKNSLL-HYKNRLVISKASSLIPAILNTFH-DSVVGHSGFLRTYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISM

Query:  DFIDGLPKAKGWDVILMVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVN
        DFI  LP++ G++ + +VVDR SK +  +      TA+  A  F + ++   G P  I++D D +F S  W +        +K S  Y PQT GQTE  N
Subjt:  DFIDGLPKAKGWDVILMVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHGFPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVN

Query:  RGLETYLRCFCSEHPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRR
        + +E  LRC CS HP  W+  +   +  YN     A   +PF++V+   P   LS  E  + +   DE  +E       ++EHL     +MK Y D K +
Subjt:  RGLETYLRCFCSEHPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSNSSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRR

Query:  QV-EFQVDELVLLKIRPYRHATLRSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIH---PVFHVSQLKKF
        ++ EFQ  +LV++K    R  T    ++ KL+  + GP+ +L++ G   Y L+LP D+  H     FHVS L+K+
Subjt:  QV-EFQVDELVLLKIRPYRHATLRSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIH---PVFHVSQLKKF

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGTCTCTACCAACGTTAGCCTTACCCAACTTTACACTCCCATTTGAAATAGAGACAGATGCATCCGATTTTGGAGTGAGAGCAGTACTAATCCAGTCAAAGAGACC
CATTGCCTTCTACAGCCATACACTATCCATGAGAGATAGAGCTCGGCCAGTATATGAACGCGAGTTGATGGCGGTTGTACTATCCGTTCAAAGATGGAGGCCATACTTGC
TTGGGGCAAAATTCGTAGTAAAAACGGATCAAAAATCACTGAAAATTTTGCTAGAACAACGGGTCATCCAACCACAATATCAAAAATGGTTATCTAAACTATTGGGGTAC
TCATTTGAAGTGGTGTACAAACCCGGCTTAGAAAATAAAGCAGCCGATGCTTTATCAAGAAAACCACCGGACATACAATTAAACAGCATTTCAGTACCATATTGGATGGA
CTTGGAAACCATAAAGGAAGAAGTAGAGAAAGATGAAAAGCTAAAGAAAATAGTAGCAAGCTTAAACGAAGAGGACGAAGACCAAACCAGCAAATTCACAATAAAGAATA
GCCTCCTGCATTACAAGAATAGACTGGTAATCTCAAAAGCGTCCTCCCTAATTCCAGCCATACTGAATACATTTCATGACTCAGTAGTAGGACACTCCGGGTTCCTAAGA
ACTTATAAAAGACTAGCAAGTGAGCTATATTGGGAGGGGATGAAATCAGATGTTAAAAAACATTGTGAAGCTTGCGTAACATGCCAACGCAACAAAAGCTTAGCTCTATC
GCCAGCCGGACTATTAATGCCACTTGACATACCGCATCAAATTTGGAGCGACATCTCTATGGACTTCATTGATGGTCTACCTAAAGCAAAAGGATGGGATGTAATACTCA
TGGTAGTAGATCGGCTCAGCAAATACAGCCACTTCTTGGCCCTTAAACACCCTTACACAGCTAAGACAGTAGCAGAAAGCTTTGTAAAAGAAATAGTGCGACTGCACGGC
TTCCCTACTTCCATTGTCTCCGATCGAGACAAAGTTTTTCTCAGCCATTTCTGGAATGAATTGTTCAAAATGGCGGGCACTAAACTCAAGAAAAGCACAGCTTACCACCC
GCAGACCTTTGGACAAACAGAGGTAGTCAACAGAGGACTAGAAACCTATCTCAGATGCTTTTGTAGTGAACACCCAAAGGAATGGATCCTATGGCTACCTTGGGCCGAGT
ACTGGTACAACACTACTTATCAAAAGGCGCTGGGAAAATCACCCTTCCAAGTGGTCTATGGCCGTAAACCGCCAACCCTACTATCTTATGGAGAACGAAGAACTTCAAAT
TCTTCAATAGACGAGCAGTTGAAAGAACGAGATGTGGCCTTAGACGCACTACGGGAGCACTTATTGCTAGCTCAACAACAAATGAAACTATATGCTGACCGAAAAAGAAG
ACAAGTGGAATTCCAGGTTGATGAATTAGTATTACTTAAAATACGACCATACCGACACGCCACTCTACGAAGCAAAAGAAATGAAAAACTATCATCACGGTATTTTGGAC
CCTACAAAATTCTCGAAAGAATTGGTGAGGTAGCGTATAGATTGGAATTACCAACGGACGCCGCTATCCACCCTGTTTTTCATGTTTCGCAACTAAAAAAGTTCGTAAAT
CAGCAGACAAATATAGTGCCCACACTACAAAACATAACAGAGAAGCTCGAGTGGCAGTCGCAACCGGAAGAAGCACGTGACTACAGACAAGACAAAACCGGGAAGTGGGA
AGTGCTAGTTGCCTTGAAGAATTTGCCAGACTATGAAGCGTCGTGGGAAGACTATGATGAAATGAACCAGCGGTACCCTAATCTACACCTTGAGGACAAGGTGAATCTCA
AAGGAGGGAGTAATGTTAGACCTCCAATCAAGCTAGTTTACCAAAGAAGAAATAAGCTACAACAGAATTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MMSLPTLALPNFTLPFEIETDASDFGVRAVLIQSKRPIAFYSHTLSMRDRARPVYERELMAVVLSVQRWRPYLLGAKFVVKTDQKSLKILLEQRVIQPQYQKWLSKLLGY
SFEVVYKPGLENKAADALSRKPPDIQLNSISVPYWMDLETIKEEVEKDEKLKKIVASLNEEDEDQTSKFTIKNSLLHYKNRLVISKASSLIPAILNTFHDSVVGHSGFLR
TYKRLASELYWEGMKSDVKKHCEACVTCQRNKSLALSPAGLLMPLDIPHQIWSDISMDFIDGLPKAKGWDVILMVVDRLSKYSHFLALKHPYTAKTVAESFVKEIVRLHG
FPTSIVSDRDKVFLSHFWNELFKMAGTKLKKSTAYHPQTFGQTEVVNRGLETYLRCFCSEHPKEWILWLPWAEYWYNTTYQKALGKSPFQVVYGRKPPTLLSYGERRTSN
SSIDEQLKERDVALDALREHLLLAQQQMKLYADRKRRQVEFQVDELVLLKIRPYRHATLRSKRNEKLSSRYFGPYKILERIGEVAYRLELPTDAAIHPVFHVSQLKKFVN
QQTNIVPTLQNITEKLEWQSQPEEARDYRQDKTGKWEVLVALKNLPDYEASWEDYDEMNQRYPNLHLEDKVNLKGGSNVRPPIKLVYQRRNKLQQN

Cmc02g0052361 (gene) of Melon (Charmono) v1.1 genome