| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.0e-167 | 99.66 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSH PVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Subjt: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
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| KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.0e-167 | 99.66 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSH PVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Subjt: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
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| KAA0052024.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.1e-160 | 95.95 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISL SSH PVQSLPPIHSADGN MSISHIGT+NTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQ GQVIGT RKVGRLFELT
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLL+NVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIH DIWGPAPCPTVNGYRY
Subjt: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANM+QTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQN RAE KHRHILDSV A
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
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| KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.9e-130 | 82.65 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN
Subjt: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSV
DNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSV
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSV
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| KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.0e-167 | 99.66 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSH PVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Subjt: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.9e-168 | 99.66 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSH PVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Subjt: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
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| A0A5A7U9K0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.9e-161 | 95.95 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISL SSH PVQSLPPIHSADGN MSISHIGT+NTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQ GQVIGT RKVGRLFELT
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLL+NVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIH DIWGPAPCPTVNGYRY
Subjt: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANM+QTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQN RAE KHRHILDSV A
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
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| A0A5A7UVX4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-130 | 82.65 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVN
Subjt: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSV
DNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSV
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSV
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| A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.9e-168 | 99.66 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSH PVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Subjt: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
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| A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.9e-168 | 99.66 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
MTSDISLLSSH PVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELT
Query: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Subjt: SLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRY
Query: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
Subjt: FVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.0e-21 | 27.18 | Show/hide |
Query: VQSLPPIHSA---DGNSMSISHIGTV---NTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPV
V+ +PP+ A G + + G V N I L + NL SV +L + G++I F G + + V +G L + PV
Subjt: VQSLPPIHSA---DGNSMSISHIGTV---NTPTIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPV
Query: --FPAISAPVTDNTLFQ-WHLRLGHASSNKLRSLTSTGLLNNVSQFNTFD-----CLHCKMAKQPALSFP--KSASLCDKPFGLIHSDIWGPAPCPTVNG
F A S F+ WH R GH S KL + + ++ S N + C C KQ L F K + +P ++HSD+ GP T++
Subjt: --FPAISAPVTDNTLFQ-WHLRLGHASSNKLRSLTSTGLLNNVSQFNTFD-----CLHCKMAKQPALSFP--KSASLCDKPFGLIHSDIWGPAPCPTVNG
Query: YRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVR
YFV+F+D ++ + Y ++ +S ++ ++ DF + F+ K+ L DN EY + F ++G + PHT Q NG +ER R I + R
Subjt: YRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-27 | 29.57 | Show/hide |
Query: TIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLT
T+ L + HVP+L NL S L G F++ ++ ++ VI G G L+ + ++A + ++ WH R+GH S L+ L
Subjt: TIKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTGRKVGRLFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLT
Query: STGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFS
L++ C +C KQ +SF S+ L++SD+ GP ++ G +YFV FIDD SR W+Y L+ + ++Q++ F +++ +
Subjt: STGLLNNVSQFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFS
Query: SKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
K+K LR+DN EY F + + G +++ P T Q NG AER +R I++ VR+
Subjt: SKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDSVRA
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| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 1.9e-15 | 24.92 | Show/hide |
Query: SSHTPVQSLPPIHSADGN-----------SMSISHIGTV------NTPT-IKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTG
+S T ++S IHSA N ++ I+ IG + NT T IK+ H PN+ ++L S+ +L + +T F+ + V + G V+
Subjt: SSHTPVQSLPPIHSADGN-----------SMSISHIGTV------NTPT-IKLSNTYHVPNLTFNLASVGQLCDLGLTIIFSSHGCQVQDSQTGQVIGTG
Query: RKVGRLFELTS---LQHSPVFPAISAPVTDNTLFQW-----HLRLGHASSNKLRSLTSTGLLNNVSQFNTFD----------CLHCKMAKQPALSFPKSA
K G + ++ L + P I+ T + ++ H L HA++ +R N ++ FN D C C + K K +
Subjt: RKVGRLFELTS---LQHSPVFPAISAPVTDNTLFQW-----HLRLGHASSNKLRSLTSTGLLNNVSQFNTFD----------CLHCKMAKQPALSFPKSA
Query: SL----CDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNR--SSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
L +PF +H+DI+GP + YF+ F D+ ++F W+Y L +R S+ ++ I+ QF + + +++ D EY + FL + G
Subjt: SL----CDKPFGLIHSDIWGPAPCPTVNGYRYFVLFIDDYSRFTWIYFLRNR--SSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQG
Query: TLIQRSCPHTSQQNGRAERKHRHILDSVR
+ S+ +G AER +R +LD R
Subjt: TLIQRSCPHTSQQNGRAERKHRHILDSVR
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.3e-39 | 32.11 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDL-GLTIIFSSHGCQVQDSQTGQVIGTGRKVGR
+TSD + LS H P + ADG+++ ISH G+ + T + L N +VPN+ NL SV +LC+ G+++ F QV+D TG + G+
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDL-GLTIIFSSHGCQVQDSQTGQVIGTGRKVGR
Query: LFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTF-DCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPT
L+E PV ++P + T WH RLGH + + L S+ S L+ ++ + F C C + K + F +S +P I+SD+W +P +
Subjt: LFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVSQFNTF-DCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPT
Query: VNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDS
+ YRY+V+F+D ++R+TW+Y L+ +S + + ++ F N+++ +F ++I +DN E+ + +Q G S PHT + NG +ERKHRHI+++
Subjt: VNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILDS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.0e-38 | 32.21 | Show/hide |
Query: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDLG-LTIIFSSHGCQVQDSQTGQVIGTGRKVGR
+TSD + LS H P + ADG+++ I+H G+ + PT + L+ +VPN+ NL SV +LC+ +++ F QV+D TG + G+
Subjt: MTSDISLLSSHTPVQSLPPIHSADGNSMSISHIGTVNTPT----IKLSNTYHVPNLTFNLASVGQLCDLG-LTIIFSSHGCQVQDSQTGQVIGTGRKVGR
Query: LFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVS-QFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPT
L+E + S ++P + T WH RLGH S L S+ S L ++ C C + K + F S KP I+SD+W +P +
Subjt: LFELTSLQHSPVFPAISAPVTDNTLFQWHLRLGHASSNKLRSLTSTGLLNNVS-QFNTFDCLHCKMAKQPALSFPKSASLCDKPFGLIHSDIWGPAPCPT
Query: VNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILD
++ YRY+V+F+D ++R+TW+Y L+ +S + ++ F ++++ +F ++I L +DN E+ R +L+Q G S PHT + NG +ERKHRHI++
Subjt: VNGYRYFVLFIDDYSRFTWIYFLRNRSSLYQIYVDFANMIQTQFSSKIKILRTDNAMEYKDSRFLSFLAQQGTLIQRSCPHTSQQNGRAERKHRHILD
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