; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc02g0053081 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc02g0053081
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr02:20523958..20525385
RNA-Seq ExpressionCmc02g0053081
SyntenyCmc02g0053081
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]9.6e-26998.11Show/hide
Query:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM

Query:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
        NDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Subjt:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
        GYLTDVKAWLAAQFQMKDL EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Subjt:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-26697.05Show/hide
Query:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVF
Subjt:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM

Query:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
        NDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEI
Subjt:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
        GYLTDVKAWLAAQFQMKDL E QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Subjt:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE

KAA0058278.1 gag/pol protein [Cucumis melo var. makuwa]3.6e-276100Show/hide
Query:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM

Query:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
        NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
Subjt:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
        GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
Subjt:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]9.6e-26998.11Show/hide
Query:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM

Query:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
        NDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Subjt:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
        GYLTDVKAWLAAQFQMKDL EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Subjt:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE

TYK15984.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-26596.63Show/hide
Query:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MV SMM YAQLPSSFWGYAVETAVHILNNVPSKSVS+IPFELWR RKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM

Query:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
        NDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Subjt:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
        GYLTDVKAWLAAQFQMKDL EAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY  QNSKK LLPF+HG HLS+E
Subjt:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE

TrEMBL top hitse value%identityAlignment
A0A5A7T2V9 Gag/pol protein9.7e-26797.05Show/hide
Query:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRVF
Subjt:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM

Query:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
        NDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEI
Subjt:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
        GYLTDVKAWLAAQFQMKDL E QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Subjt:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE

A0A5A7TZD0 Gag/pol protein4.6e-26998.11Show/hide
Query:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM

Query:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
        NDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Subjt:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
        GYLTDVKAWLAAQFQMKDL EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Subjt:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE

A0A5A7USZ2 Gag/pol protein1.8e-276100Show/hide
Query:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM

Query:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
        NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
Subjt:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
        GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
Subjt:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE

A0A5A7UYE8 Gag/pol protein4.6e-26998.11Show/hide
Query:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MVRSMM YAQLPSSFWGYAVETAVHILNNVPSKSVSE PFELWR RKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM

Query:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
        NDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Subjt:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
        GYLTDVKAWLAAQFQMKDL EAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS QNSKKGLLPFRHGVHLSKE
Subjt:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE

A0A5D3CYF4 Gag/pol protein1.8e-26596.63Show/hide
Query:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        MV SMM YAQLPSSFWGYAVETAVHILNNVPSKSVS+IPFELWR RKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
Subjt:  MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
        VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRM RRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Subjt:  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM

Query:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI
        NDVDKDQWVKAMDLEMESMYFNSVWELVDL EGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS VAMLKSIRILLSIATFYDYEI
Subjt:  NDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEI

Query:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
        WQMDVKTAFLN NLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV
Subjt:  WQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDV

Query:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE
        GYLTDVKAWLAAQFQMKDL EAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY  QNSKK LLPF+HG HLS+E
Subjt:  GYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE

SwissProt top hitse value%identityAlignment
P04146 Copia protein7.9e-5627.84Show/hide
Query:  RSMMCYAQLPSSFWGYAVETAVHILNNVPSKSV---SEIPFELWRERKPSLSHFRIWGCPAHVLVTNPK-KLEPRSRLCQFVGYPKETRGGLFFD-----
        R+M+  A+L  SFWG AV TA +++N +PS+++   S+ P+E+W  +KP L H R++G   +V + N + K + +S    FVGY  E  G   +D     
Subjt:  RSMMCYAQLPSSFWGYAVETAVHILNNVPSKSV---SEIPFELWRERKPSLSHFRIWGCPAHVLVTNPK-KLEPRSRLCQFVGYPKETRGGLFFD-----

Query:  --------------------------------------PQENRVFVST----------NATFLEEDHMRNHK----PRSKLVLSEATDESTR--------
                                              P ++R  + T          N  FL++     +K       K++ +E  +ES          
Subjt:  --------------------------------------PQENRVFVST----------NATFLEEDHMRNHK----PRSKLVLSEATDESTR--------

Query:  --------VVDEVGPSSRVDETTTS-GQSHPSQSLR-----------------------MSRRSGRVVSQPNRYLGLTE---TQVVIPDDGV--EDPLSY
                 ++E     R D    S G  +P++S                         ++RRS R+ ++P       +    +VV+    +  + P S+
Subjt:  --------VVDEVGPSSRVDETTTS-GQSHPSQSLR-----------------------MSRRSGRVVSQPNRYLGLTE---TQVVIPDDGV--EDPLSY

Query:  KQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFY
         +     DK  W +A++ E+ +   N+ W +    E    +  +W++  K +  G    +KARLVA+G+TQ+  +DYEETF+ VA + S R +LS+   Y
Subjt:  KQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFY

Query:  DYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY--KKINKGKVAFLVLYVDDIL
        + ++ QMDVKTAFLN  L+E I+M  P+G         VCKLN++IYGLKQA+R W   F+ A+K   F  +  + C+Y   K N  +  +++LYVDD++
Subjt:  DYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY--KKINKGKVAFLVLYVDDIL

Query:  LIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQN
        +   D+  + + K +L  +F+M DL E ++ +GI+I  + +   + LSQ+ Y+ K+L +++ +N
Subjt:  LIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQN

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-9038.29Show/hide
Query:  VRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCP--AHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENR
        VRSM+  A+LP SFWG AV+TA +++N  PS  ++ EIP  +W  ++ S SH +++GC   AHV      KL+ +S  C F+GY  E  G   +DP + +
Subjt:  VRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCP--AHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENR

Query:  VFVSTNATFLEEDHM----RNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQ-------------------SHPSQSLRMS---RRSGRVVSQP
        V  S +  F E +       + K ++ ++ +  T  ST   +     S  DE +  G+                    HP+Q        RRS R   + 
Subjt:  VFVSTNATFLEEDHM----RNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQ-------------------SHPSQSLRMS---RRSGRVVSQP

Query:  NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVD
         RY   +   V+I DD   +P S K+ ++  +K+Q +KAM  EMES+  N  ++LV+L +G +P+ CKW++K K+D   K+  +KARLV KG+ Q++G+D
Subjt:  NRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVD

Query:  YEETFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP
        ++E FS V  + SIR +LS+A   D E+ Q+DVKTAFL+ +LEE I+M QPEGF   G++  VCKLN+S+YGLKQA R W ++FD+ +KS  + +   +P
Subjt:  YEETFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP

Query:  CVY-KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVH
        CVY K+ ++     L+LYVDD+L++G D G +  +K  L+  F MKDL  AQ +LG++I+R+R ++ L LSQ  YI+++L R++ +N+K    P    + 
Subjt:  CVY-KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVH

Query:  LSKE
        LSK+
Subjt:  LSKE

P25600 Putative transposon Ty5-1 protein YCL074W6.1e-1634.01Show/hide
Query:  MDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGY
        MDV TAFLN  ++E I++ QP GF+ +     V +L   +YGLKQA   WN   +  +K  GF ++  E  +Y +       ++ +YVDD+L+       
Subjt:  MDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGY

Query:  LTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDK
           VK  L   + MKDL +    LG+  I    N  + LS   YI K
Subjt:  LTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDK

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.5e-5126.47Show/hide
Query:  SMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        +++ +A +P ++W YA   AV+++N +P+  +  E PF+      P+    R++GC  +  +   N  KL+ +SR C F+GY       L    Q +R++
Subjt:  SMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEE-----------DHMRNHKPRSKLVLSEATDESTR---------------------------------------------------VVDEV
        +S +  F E              ++  +  S  V S  T   TR                                                      + 
Subjt:  VSTNATFLEE-----------DHMRNHKPRSKLVLSEATDESTR---------------------------------------------------VVDEV

Query:  GPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQ-----------------PNRYLGLTETQVVIPDDGVEDPLSYKQAMND-------------------
        GP      T T  Q+H SQ+   +  +    SQ                 P      + T    P   +  P    Q +N+                   
Subjt:  GPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQ-----------------PNRYLGLTETQVVIPDDGVEDPLSYKQAMND-------------------

Query:  -------------------------VDKDQWVKAMDLEMESMYFNSVWELVDLLEG-VKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEET
                                 +  ++W  AM  E+ +   N  W+LV      V  +GC+WI+ +K +S G +  +KARLVAKGY QR G+DY ET
Subjt:  -------------------------VDKDQWVKAMDLEMESMYFNSVWELVDLLEG-VKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEET

Query:  FSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYK
        FS V    SIRI+L +A    + I Q+DV  AFL   L + ++MSQP GFI + +   VCKL +++YGLKQA R+W +     + + GF  +V +  ++ 
Subjt:  FSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYK

Query:  KINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLS
              + ++++YVDDIL+ GND   L +    L+ +F +KD EE  Y LGI+    R    L LSQ  YI  LL R +   +K    P      LS
Subjt:  KINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.0e-4825.8Show/hide
Query:  SMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF
        +++ +A +P ++W YA   AV+++N +P+  +  + PF+    + P+    +++GC  +  +   N  KLE +S+ C F+GY       L       R++
Subjt:  SMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF

Query:  VSTNATFLEE----------------------DHMRNHK--PRSKLVL------------------SEATDESTRVVDEVGPSSRVDETTTSGQSHPSQS
         S +  F E                        +  +H   P + LVL                  S +   +T+V     PSS +   ++S  + PS +
Subjt:  VSTNATFLEE----------------------DHMRNHK--PRSKLVL------------------SEATDESTRVVDEVGPSSRVDETTTSGQSHPSQS

Query:  ----------LRMSRRSGRVVSQPN----------------------RYLGLTETQVVIPD---------------------------------------
                   + S  +  +++ PN                       ++    T +  P+                                       
Subjt:  ----------LRMSRRSGRVVSQPN----------------------RYLGLTETQVVIPD---------------------------------------

Query:  -DGVEDP---LSY----------KQAMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVD
         DG+  P    SY          + A+  +  D+W +AM  E+ +   N  W+LV      V  +GC+WI+ +K +S G +  +KARLVAKGY QR G+D
Subjt:  -DGVEDP---LSY----------KQAMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVD

Query:  YEETFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP
        Y ETFS V    SIRI+L +A    + I Q+DV  AFL   L + ++MSQP GF+ + +   VC+L ++IYGLKQA R+W +   T + + GF  ++ + 
Subjt:  YEETFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEP

Query:  CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLP
         ++       + ++++YVDDIL+ GND   L      L+ +F +K+ E+  Y LGI+    R  + L LSQ  Y   LL R +   +K    P
Subjt:  CVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.6e-5036.93Show/hide
Query:  EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILL
        ++P +Y +A   +    W  AMD E+ +M     WE+  L    KPIGCKW+YK K +S G ++ +KARLVAKGYTQ+EG+D+ ETFS V  L S++++L
Subjt:  EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILL

Query:  SIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFL
        +I+  Y++ + Q+D+  AFLN +L+E I+M  P G+   QG       VC L +SIYGLKQASR W ++F   +  +GF Q+  +   + KI       +
Subjt:  SIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFL

Query:  VLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLS
        ++YVDDI++  N+   + ++K+ L + F+++DL   +Y LG++I R      + + Q  Y   LL        K   +P    V  S
Subjt:  VLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLS

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-0940Show/hide
Query:  VRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSR
        VRSM+C   LP +F   A  TAVHI+N  PS +++  +P E+W +  P+ S+ R +GC A++   +  KL+PR++
Subjt:  VRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVS-EIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSR

ATMG00810.1 DNA/RNA polymerases superfamily protein1.1e-0443.28Show/hide
Query:  FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLL
        +L+LYVDDILL G+    L  +   L++ F MKDL    Y LGIQI        L LSQ  Y +++L
Subjt:  FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLALSQATYIDKLL

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.9e-1334.59Show/hide
Query:  MSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARL
        M  RS   +++ N    LT T  +      ++P S   A+ D     W +AM  E++++  N  W LV        +GCKW++K K  S G +   KARL
Subjt:  MSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARL

Query:  VAKGYTQREGVDYEETFSHVAMLKSIRILLSIA
        VAKG+ Q EG+ + ET+S V    +IR +L++A
Subjt:  VAKGYTQREGVDYEETFSHVAMLKSIRILLSIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGTTCAATGATGTGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGA
AATACCTTTCGAGTTATGGAGAGAACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTT
CAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAA
GACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAAC
CACCACATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGTCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTG
TTATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTAC
TTCAATTCAGTGTGGGAGCTTGTAGATCTACTTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAA
AGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCATGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCA
CATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGT
CAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTATGGTTTTGACCA
GAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTA
CTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGAAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCA
CTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGACGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGTTCAATGATGTGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGA
AATACCTTTCGAGTTATGGAGAGAACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTT
CAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAA
GACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAAC
CACCACATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGTCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTG
TTATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTAC
TTCAATTCAGTGTGGGAGCTTGTAGATCTACTTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAA
AGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCATGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCA
CATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGT
CAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTATGGTTTTGACCA
GAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTA
CTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGAAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCA
CTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGACGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAATAG
Protein sequenceShow/hide protein sequence
MVRSMMCYAQLPSSFWGYAVETAVHILNNVPSKSVSEIPFELWRERKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEE
DHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMSRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMY
FNSVWELVDLLEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQG
QEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLEEAQYVLGIQIIRDRKNKTLA
LSQATYIDKLLVRYSTQNSKKGLLPFRHGVHLSKE